Literature DB >> 22083793

Shadow enhancers: frequently asked questions about distributed cis-regulatory information and enhancer redundancy.

Scott Barolo1.   

Abstract

This paper, in the form of a frequently asked questions page (FAQ), addresses outstanding questions about "shadow enhancers", quasi-redundant cis-regulatory elements, and their proposed roles in transcriptional control. Questions include: What exactly are shadow enhancers? How many genes have shadow/redundant/distributed enhancers? How redundant are these elements? What is the function of distributed enhancers? How modular are enhancers? Is it useful to study a single enhancer in isolation? In addition, a revised definition of "shadow enhancers" is proposed, and possible mechanisms of shadow enhancer function and evolution are discussed.
Copyright © 2012 WILEY Periodicals, Inc.

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Year:  2011        PMID: 22083793      PMCID: PMC3517143          DOI: 10.1002/bies.201100121

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  88 in total

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  88 in total

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Review 5.  Enhancer redundancy in development and disease.

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Review 8.  Transcription factors: from enhancer binding to developmental control.

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10.  A survey of 6,300 genomic fragments for cis-regulatory activity in the imaginal discs of Drosophila melanogaster.

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