Literature DB >> 2207247

Conformational substates and motions in myoglobin. External influences on structure and dynamics.

M K Hong1, D Braunstein, B R Cowen, H Frauenfelder, I E Iben, J R Mourant, P Ormos, R Scholl, A Schulte, P J Steinbach.   

Abstract

Myoglobin, a simppe dioxygen-storage protein, is a good laboratory for the investigation of the connection between protein structure, dynamics, and function. Fourier-transform infrared spectroscopy on carbon-monoxymyoglobin (MbCO) shows three major CO bands. These bands are excellent probes for the investigation of the structure-function relationship. They have different CO binding kinetics and their CO dipoles form different angles with respect to the heme normal, implying that MbCO exists in three major conformational substates, A0, A1, and A3. The entropies and enthalpies of these substates depend on temperature above approximately 180 K and are influenced by pH, solvent, and pressure. These results suggest that even a protein as simple as Mb can assume a small number of clearly different structures that perform the same function, but with different rates. Moreover, protein structure and dynamics depend strongly on the interaction of the protein with its environment.

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Year:  1990        PMID: 2207247      PMCID: PMC1280983          DOI: 10.1016/S0006-3495(90)82388-2

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  24 in total

1.  Glassy behavior of a protein.

Authors: 
Journal:  Phys Rev Lett       Date:  1989-04-17       Impact factor: 9.161

2.  Inhomogeneous broadening in spectral bands of carbonmonoxymyoglobin. The connection between spectral and functional heterogeneity.

Authors:  P Ormos; A Ansari; D Braunstein; B R Cowen; H Frauenfelder; M K Hong; I E Iben; T B Sauke; P J Steinbach; R D Young
Journal:  Biophys J       Date:  1990-02       Impact factor: 4.033

3.  Structural basis of hierarchical multiple substates of a protein. I: Introduction.

Authors:  T Noguti; N Go
Journal:  Proteins       Date:  1989

4.  Orientation of carbon monoxide and structure-function relationship in carbonmonoxymyoglobin.

Authors:  P Ormos; D Braunstein; H Frauenfelder; M K Hong; S L Lin; T B Sauke; R D Young
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

5.  Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin.

Authors:  R Elber; M Karplus
Journal:  Science       Date:  1987-01-16       Impact factor: 47.728

6.  Cold denaturation of myoglobin.

Authors:  P L Privalov; V P Kutyshenko
Journal:  J Mol Biol       Date:  1986-08-05       Impact factor: 5.469

7.  Linkage of functional and structural heterogeneity in proteins: dynamic hole burning in carboxymyoglobin.

Authors:  B F Campbell; M R Chance; J M Friedman
Journal:  Science       Date:  1987-10-16       Impact factor: 47.728

8.  Protein states and proteinquakes.

Authors:  A Ansari; J Berendzen; S F Bowne; H Frauenfelder; I E Iben; T B Sauke; E Shyamsunder; R D Young
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

9.  The purity of two commercial hemeproteins.

Authors:  K G Paul; P I Ohlson; B Norden; M L Smith
Journal:  Acta Chem Scand B       Date:  1985

10.  Rebinding and relaxation in the myoglobin pocket.

Authors:  A Ansari; J Berendzen; D Braunstein; B R Cowen; H Frauenfelder; M K Hong; I E Iben; J B Johnson; P Ormos; T B Sauke
Journal:  Biophys Chem       Date:  1987-05-09       Impact factor: 2.352

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  36 in total

1.  Unexpected BII conformer substate population in unoriented hydrated films of the d(CGCGAATTCGCG)2 dodecamer and of native B-DNA from salmon testes.

Authors:  A Pichler; S Rüdisser; M Mitterböck; C G Huber; R H Winger; K R Liedl; A Hallbrucker; E Mayer
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

2.  Proton electron nuclear double resonance from nitrosyl horse heart myoglobin: the role of His-E7 and Val-E11.

Authors:  M Flores; E Wajnberg; G Bemski
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

3.  Kinetic evidence for three photolyzable taxonomic conformational substates in oxymyoglobin.

Authors:  Catherine Tetreau; Eugene Novikov; Martine Tourbez; Daniel Lavalette
Journal:  Biophys J       Date:  2002-04       Impact factor: 4.033

4.  Influence of the heme pocket conformation on the structure and vibrations of the Fe-CO bond in myoglobin: a QM/MM density functional study.

Authors:  C Rovira; B Schulze; M Eichinger; J D Evanseck; M Parrinello
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

5.  Myoglobin-CO conformational substate dynamics: 2D vibrational echoes and MD simulations.

Authors:  Kusai A Merchant; David E Thompson; Qing-Hua Xu; Ryan B Williams; Roger F Loring; Michael D Fayer
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

6.  Myoglobin-CO substate structures and dynamics: multidimensional vibrational echoes and molecular dynamics simulations.

Authors:  Kusai A Merchant; W G Noid; Ryo Akiyama; Ilya J Finkelstein; Alexei Goun; Brian L McClain; Roger F Loring; M D Fayer
Journal:  J Am Chem Soc       Date:  2003-11-12       Impact factor: 15.419

7.  The influence of solvent composition on global dynamics of human butyrylcholinesterase powders: a neutron-scattering study.

Authors:  F Gabel; M Weik; B P Doctor; A Saxena; D Fournier; L Brochier; F Renault; P Masson; I Silman; G Zaccai
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

8.  Determination of rate distributions from kinetic experiments.

Authors:  P J Steinbach; K Chu; H Frauenfelder; J B Johnson; D C Lamb; G U Nienhaus; T B Sauke; R D Young
Journal:  Biophys J       Date:  1992-01       Impact factor: 4.033

9.  Dynamics of hemoglobin in human erythrocytes and in solution: influence of viscosity studied by ultrafast vibrational echo experiments.

Authors:  Brian L McClain; Ilya J Finkelstein; M D Fayer
Journal:  J Am Chem Soc       Date:  2004-12-08       Impact factor: 15.419

10.  Normal modes for predicting protein motions: a comprehensive database assessment and associated Web tool.

Authors:  Vadim Alexandrov; Ursula Lehnert; Nathaniel Echols; Duncan Milburn; Donald Engelman; Mark Gerstein
Journal:  Protein Sci       Date:  2005-03       Impact factor: 6.725

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