Literature DB >> 22065465

4-(6-Chloro-imidazo[1,2-b]pyridazin-3-yl)benzonitrile.

Yiliang Zhao1, Clarissa K L Ng.   

Abstract

In the title compound, C(13)H(7)ClN(4), the imidazopyridazine ring system is essentially planar [maximum deviation 0.015 (1) Å]. It is inclined to the benzene ring of the benzonitrile group by 11.31 (2)°. In the crystal, molecules are linked via C-H⋯Cl and C-H⋯N interactions.

Entities:  

Year:  2011        PMID: 22065465      PMCID: PMC3201438          DOI: 10.1107/S1600536811037901

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see Kia et al. (2009 ▶); Khan et al. (2010 ▶); Xue (2010 ▶); Zhao et al. (2009 ▶).

Experimental

Crystal data

C13H7ClN4 M = 254.68 Tetragonal, a = 13.5513 (12) Å c = 24.566 (3) Å V = 4511.3 (7) Å3 Z = 16 Mo Kα radiation μ = 0.32 mm−1 T = 150 K 0.25 × 0.15 × 0.10 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.659, T max = 0.746 140841 measured reflections 18107 independent reflections 11833 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.141 S = 1.08 18107 reflections 191 parameters 7 restraints All H-atom parameters refined Δρmax = 0.85 e Å−3 Δρmin = −0.34 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1999 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811037901/ng5227sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811037901/ng5227Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811037901/ng5227Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H7ClN4Dx = 1.500 Mg m3
Mr = 254.68Mo Kα radiation, λ = 0.71073 Å
Tetragonal, I41/aCell parameters from 500 reflections
a = 13.5513 (12) Åθ = 1.7–62.3°
c = 24.566 (3) ŵ = 0.32 mm1
V = 4511.3 (7) Å3T = 150 K
Z = 16Block, colourless
F(000) = 20800.25 × 0.15 × 0.10 mm
none
Bruker SMART APEXII CCD diffractometer18107 independent reflections
Radiation source: fine-focus sealed tube11833 reflections with I > 2σ(I)
graphiteRint = 0.032
ω scansθmax = 62.3°, θmin = 1.7°
Absorption correction: multi-scan (SAINT; Bruker, 2008)h = −33→32
Tmin = 0.659, Tmax = 0.746k = −33→31
140841 measured reflectionsl = −58→60
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141All H-atom parameters refined
S = 1.08w = 1/[σ2(Fo2) + (0.0756P)2] where P = (Fo2 + 2Fc2)/3
18107 reflections(Δ/σ)max = 0.001
191 parametersΔρmax = 0.85 e Å3
7 restraintsΔρmin = −0.34 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.Reflections -1 11 4, -2 4 0, -5 7 10, 4 4 0, 2 4 2, 1 8 13, -4 8 6, 1 3 16, -2 4 22, -1 10 1, -1 6 1, 0 0 24, -4 6 10, 4 5 11, -2 5 7 were omitted due to bad agreement statistics.
xyzUiso*/Ueq
C10.39217 (3)0.36640 (3)0.159032 (17)0.01678 (5)
C20.37908 (3)0.45664 (3)0.187490 (19)0.01942 (6)
C30.36436 (3)0.45225 (3)0.242477 (19)0.01919 (6)
C40.36372 (3)0.35883 (3)0.267513 (16)0.01652 (5)
C50.35942 (3)0.23262 (3)0.319699 (16)0.01807 (5)
C60.37353 (3)0.19353 (3)0.267716 (15)0.01514 (5)
C70.37986 (3)0.09040 (3)0.251063 (15)0.01514 (5)
C80.38792 (3)0.01863 (3)0.292379 (18)0.01890 (6)
C90.38734 (4)−0.08101 (3)0.27984 (2)0.02124 (7)
C100.38037 (3)−0.11125 (3)0.22543 (2)0.01965 (6)
C110.37593 (3)−0.04085 (3)0.183904 (18)0.01980 (6)
C120.37476 (3)0.05927 (3)0.196657 (16)0.01772 (5)
C130.37580 (4)−0.21460 (3)0.21251 (2)0.02413 (8)
N10.37014 (5)−0.29780 (4)0.20267 (3)0.03142 (10)
N20.39085 (2)0.27773 (2)0.179828 (13)0.01557 (4)
N30.37627 (2)0.27594 (2)0.234420 (13)0.01445 (4)
N40.35305 (3)0.33273 (3)0.319431 (15)0.01907 (5)
Cl10.413952 (9)0.370824 (9)0.089725 (5)0.02143 (3)
H20.3846 (8)0.5243 (4)0.1643 (3)0.031 (2)*
H30.3542 (7)0.5204 (4)0.2647 (4)0.030 (2)*
H50.3569 (8)0.1898 (7)0.3569 (2)0.034 (3)*
H80.3999 (8)0.0435 (7)0.33372 (15)0.031 (2)*
H90.3914 (7)−0.1341 (6)0.3127 (3)0.029 (2)*
H110.3662 (8)−0.0628 (9)0.14188 (16)0.042 (3)*
H120.3662 (7)0.1155 (5)0.1657 (3)0.030 (2)*
U11U22U33U12U13U23
C10.01593 (12)0.01674 (12)0.01767 (13)0.00052 (9)−0.00065 (9)0.00152 (9)
C20.02065 (14)0.01551 (12)0.02209 (15)0.00112 (10)−0.00169 (11)0.00123 (10)
C30.02072 (14)0.01484 (12)0.02199 (15)0.00197 (10)−0.00191 (11)−0.00164 (10)
C40.01706 (12)0.01544 (11)0.01706 (12)0.00196 (9)−0.00169 (9)−0.00230 (9)
C50.02051 (14)0.01867 (13)0.01504 (11)0.00221 (10)−0.00118 (10)−0.00095 (9)
C60.01548 (11)0.01474 (11)0.01520 (11)0.00104 (8)−0.00108 (8)−0.00048 (8)
C70.01486 (11)0.01468 (11)0.01587 (11)0.00048 (8)−0.00133 (8)−0.00043 (8)
C80.02312 (15)0.01589 (12)0.01768 (13)0.00058 (10)−0.00269 (11)0.00081 (10)
C90.02647 (18)0.01571 (13)0.02155 (15)0.00072 (11)−0.00397 (13)0.00104 (11)
C100.02066 (14)0.01475 (12)0.02353 (16)0.00046 (10)−0.00355 (12)−0.00161 (11)
C110.02297 (16)0.01711 (13)0.01932 (14)−0.00005 (11)−0.00236 (11)−0.00292 (10)
C120.02068 (14)0.01622 (12)0.01625 (12)−0.00001 (10)−0.00164 (10)−0.00097 (9)
C130.02702 (19)0.01604 (14)0.0293 (2)0.00087 (12)−0.00495 (16)−0.00242 (13)
N10.0399 (3)0.01696 (15)0.0374 (3)0.00031 (15)−0.0067 (2)−0.00451 (15)
N20.01569 (10)0.01588 (10)0.01514 (9)0.00048 (7)−0.00012 (7)0.00018 (7)
N30.01422 (9)0.01436 (9)0.01476 (9)0.00097 (7)−0.00081 (7)−0.00084 (7)
N40.02264 (13)0.01842 (12)0.01614 (11)0.00297 (9)−0.00162 (9)−0.00302 (9)
Cl10.02372 (5)0.02314 (5)0.01744 (4)0.00047 (3)0.00083 (3)0.00373 (3)
C1—N21.3058 (5)C7—C121.4033 (5)
C1—C21.4197 (6)C7—C81.4100 (6)
C1—Cl11.7291 (5)C8—C91.3849 (6)
C2—C31.3668 (7)C8—H81.0824 (10)
C2—H21.0819 (10)C9—C101.4014 (7)
C3—C41.4074 (6)C9—H91.0824 (10)
C3—H31.0816 (10)C10—C111.3980 (7)
C4—N41.3315 (6)C10—C131.4374 (6)
C4—N31.3970 (5)C11—C121.3925 (6)
C5—N41.3593 (6)C11—H111.0825 (10)
C5—C61.3957 (5)C12—H121.0823 (10)
C5—H51.0827 (10)C13—N11.1557 (7)
C6—N31.3847 (5)N2—N31.3558 (5)
C6—C71.4588 (5)
N2—C1—C2126.74 (4)C9—C8—C7120.80 (4)
N2—C1—Cl1114.80 (3)C9—C8—H8120.9 (6)
C2—C1—Cl1118.45 (3)C7—C8—H8118.2 (6)
C3—C2—C1117.87 (4)C8—C9—C10119.84 (4)
C3—C2—H2124.6 (5)C8—C9—H9118.8 (6)
C1—C2—H2117.5 (5)C10—C9—H9121.4 (6)
C2—C3—C4118.16 (4)C11—C10—C9119.96 (4)
C2—C3—H3118.7 (5)C11—C10—C13120.14 (4)
C4—C3—H3123.2 (5)C9—C10—C13119.89 (4)
N4—C4—N3110.92 (3)C12—C11—C10120.08 (4)
N4—C4—C3131.17 (4)C12—C11—H11118.7 (7)
N3—C4—C3117.91 (4)C10—C11—H11120.9 (7)
N4—C5—C6112.52 (4)C11—C12—C7120.44 (4)
N4—C5—H5122.4 (6)C11—C12—H12121.9 (5)
C6—C5—H5125.0 (6)C7—C12—H12117.6 (5)
N3—C6—C5103.77 (3)N1—C13—C10178.50 (7)
N3—C6—C7127.26 (3)C1—N2—N3113.92 (3)
C5—C6—C7128.92 (4)N2—N3—C6127.06 (3)
C12—C7—C8118.82 (4)N2—N3—C4125.38 (3)
C12—C7—C6123.52 (3)C6—N3—C4107.54 (3)
C8—C7—C6117.62 (3)C4—N4—C5105.24 (3)
N2—C1—C2—C30.66 (7)C8—C7—C12—C111.11 (6)
Cl1—C1—C2—C3−178.41 (3)C6—C7—C12—C11−176.50 (4)
C1—C2—C3—C40.41 (6)C11—C10—C13—N1−112 (3)
C2—C3—C4—N4178.65 (4)C9—C10—C13—N167 (3)
C2—C3—C4—N3−1.24 (6)C2—C1—N2—N3−0.74 (6)
N4—C5—C6—N30.34 (5)Cl1—C1—N2—N3178.35 (3)
N4—C5—C6—C7−177.28 (4)C1—N2—N3—C6−178.44 (4)
N3—C6—C7—C12−10.13 (6)C1—N2—N3—C4−0.23 (5)
C5—C6—C7—C12166.96 (4)C5—C6—N3—N2178.38 (3)
N3—C6—C7—C8172.24 (4)C7—C6—N3—N2−3.94 (6)
C5—C6—C7—C8−10.67 (6)C5—C6—N3—C4−0.09 (4)
C12—C7—C8—C9−2.26 (6)C7—C6—N3—C4177.58 (4)
C6—C7—C8—C9175.48 (4)N4—C4—N3—N2−178.70 (4)
C7—C8—C9—C101.11 (7)C3—C4—N3—N21.21 (6)
C8—C9—C10—C111.22 (7)N4—C4—N3—C6−0.19 (4)
C8—C9—C10—C13−177.53 (5)C3—C4—N3—C6179.72 (4)
C9—C10—C11—C12−2.37 (7)N3—C4—N4—C50.39 (5)
C13—C10—C11—C12176.38 (4)C3—C4—N4—C5−179.51 (4)
C10—C11—C12—C71.19 (7)C6—C5—N4—C4−0.46 (5)
D—H···AD—HH···AD···AD—H···A
C2—H2···N1i1.08 (1)2.60 (1)3.3502 (7)126.(1)
C3—H3···Cl1ii1.08 (1)2.70 (1)3.7389 (6)161.(1)
C5—H5···N4iii1.08 (1)2.31 (1)3.3341 (7)157.(1)
C8—H8···N4iii1.08 (1)2.52 (1)3.6049 (8)177.(1)
C12—H12···N21.08 (1)2.25 (1)2.9975 (6)125.(1)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯N1i1.08 (1)2.60 (1)3.3502 (7)126 (1)
C3—H3⋯Cl1ii1.08 (1)2.70 (1)3.7389 (6)161 (1)
C5—H5⋯N4iii1.08 (1)2.31 (1)3.3341 (7)157 (1)
C8—H8⋯N4iii1.08 (1)2.52 (1)3.6049 (8)177 (1)
C12—H12⋯N21.08 (1)2.25 (1)2.9975 (6)125 (1)

Symmetry codes: (i) ; (ii) ; (iii) .

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