Literature DB >> 21583126

4-(6-Quinolyl-oxymeth-yl)benzonitrile.

Min Min Zhao1, Yong Hua Li, De Hong Wu, Qing Wan.   

Abstract

The title compound, C(17)H(12)N(2)O, was synthesized by an ether synthesis from quinolin-6-ol and 4-(bromo-meth-yl)benzonitrile. The phenyl ring of the benzonitrile group makes a dihedral angle of 47.52 (6)° with the plane of the quinoline fragment. The crystal structure is stabilized by inter-molecular C-H⋯π inter-actions between a benzene H atom of the benzonitrile group and the benzene ring of the quinoline fragment. In addition, the crystal structure also exhibits a weak inter-molecular C-H⋯N hydrogen bond.

Entities:  

Year:  2009        PMID: 21583126      PMCID: PMC2969587          DOI: 10.1107/S1600536809016560

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to nitrile compounds, see: Jin et al. (1994 ▶); Brewis et al. (2003 ▶). For related structures, see: Fu & Zhao (2007 ▶); Zhao (2008 ▶).

Experimental

Crystal data

C17H12N2O M = 260.29 Monoclinic, a = 9.466 (2) Å b = 13.078 (3) Å c = 10.857 (2) Å β = 90.81 (3)° V = 1343.9 (5) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.30 × 0.26 × 0.24 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.976, T max = 0.981 12007 measured reflections 2622 independent reflections 1956 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.120 S = 1.06 2622 reflections 182 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.13 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL/PC. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016560/lx2099sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016560/lx2099Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H12N2OF(000) = 544
Mr = 260.29Dx = 1.286 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 10916 reflections
a = 9.466 (2) Åθ = 6.2–55.5°
b = 13.078 (3) ŵ = 0.08 mm1
c = 10.857 (2) ÅT = 293 K
β = 90.81 (3)°Prism, colourless
V = 1343.9 (5) Å30.30 × 0.26 × 0.24 mm
Z = 4
Rigaku SCXmini diffractometer2622 independent reflections
Radiation source: fine-focus sealed tube1956 reflections with I > 2σ(I)
graphiteRint = 0.054
Detector resolution: 13.6612 pixels mm-1θmax = 26.0°, θmin = 3.1°
ω scansh = −11→11
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −16→16
Tmin = 0.976, Tmax = 0.981l = −13→13
12007 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049H-atom parameters constrained
wR(F2) = 0.120w = 1/[σ2(Fo2) + (0.050P)2 + 0.1913P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2622 reflectionsΔρmax = 0.14 e Å3
182 parametersΔρmin = −0.13 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.018 (4)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.48772 (13)0.46617 (8)0.29375 (10)0.0598 (4)
N10.40388 (17)0.05815 (11)0.18437 (15)0.0620 (4)
N20.7214 (2)0.99565 (14)0.44097 (18)0.0841 (6)
C10.46122 (17)0.36816 (12)0.25614 (16)0.0484 (4)
C20.49253 (18)0.29346 (13)0.34606 (16)0.0538 (5)
H20.52510.31340.42360.065*
C30.47550 (19)0.19262 (13)0.32018 (16)0.0547 (5)
H30.49840.14410.37980.066*
C40.42364 (17)0.16054 (12)0.20416 (16)0.0478 (4)
C50.3504 (2)0.03171 (15)0.07708 (19)0.0701 (6)
H50.3356−0.03760.06240.084*
C60.3139 (2)0.10024 (15)−0.01687 (19)0.0691 (6)
H60.27640.0765−0.09120.083*
C70.33370 (19)0.20151 (13)0.00168 (16)0.0570 (5)
H70.31030.2482−0.05990.068*
C80.39011 (16)0.23550 (12)0.11523 (15)0.0451 (4)
C90.40997 (17)0.34014 (12)0.14319 (15)0.0474 (4)
H90.38810.38980.08460.057*
C100.45964 (19)0.54615 (12)0.20742 (16)0.0526 (4)
H10A0.35880.55170.19180.063*
H10B0.50560.53160.13010.063*
C110.51542 (17)0.64433 (12)0.26109 (15)0.0478 (4)
C120.43628 (18)0.73295 (12)0.25445 (17)0.0531 (5)
H120.34660.73100.21850.064*
C130.48752 (18)0.82412 (13)0.30002 (17)0.0552 (5)
H130.43300.88310.29480.066*
C140.62108 (18)0.82714 (12)0.35366 (15)0.0494 (4)
C150.70261 (19)0.73897 (13)0.35993 (17)0.0576 (5)
H150.79270.74100.39510.069*
C160.64942 (19)0.64883 (13)0.31393 (17)0.0574 (5)
H160.70420.58990.31830.069*
C170.6764 (2)0.92132 (15)0.40205 (17)0.0607 (5)
U11U22U33U12U13U23
O10.0811 (9)0.0411 (7)0.0567 (8)−0.0085 (6)−0.0115 (6)0.0033 (5)
N10.0743 (11)0.0411 (9)0.0705 (11)0.0007 (7)0.0028 (8)0.0007 (7)
N20.0966 (13)0.0606 (11)0.0946 (13)−0.0189 (10)−0.0163 (10)−0.0113 (10)
C10.0489 (9)0.0409 (9)0.0551 (10)−0.0042 (7)−0.0015 (8)0.0030 (8)
C20.0596 (11)0.0524 (11)0.0494 (10)−0.0030 (8)−0.0063 (8)0.0048 (8)
C30.0610 (11)0.0479 (11)0.0553 (11)0.0019 (8)−0.0030 (8)0.0128 (8)
C40.0455 (9)0.0412 (10)0.0569 (11)0.0011 (7)0.0043 (8)0.0037 (8)
C50.0847 (15)0.0449 (11)0.0808 (15)−0.0049 (9)0.0041 (11)−0.0085 (10)
C60.0842 (14)0.0584 (12)0.0646 (12)−0.0103 (10)−0.0065 (10)−0.0105 (10)
C70.0635 (12)0.0526 (11)0.0546 (11)−0.0049 (8)−0.0053 (9)0.0016 (8)
C80.0396 (9)0.0439 (9)0.0516 (10)−0.0019 (7)0.0007 (7)0.0025 (7)
C90.0502 (10)0.0433 (9)0.0485 (10)−0.0011 (7)−0.0052 (7)0.0089 (7)
C100.0589 (11)0.0427 (10)0.0562 (11)−0.0010 (8)−0.0035 (8)0.0040 (8)
C110.0489 (10)0.0431 (10)0.0514 (10)−0.0033 (7)0.0032 (7)0.0030 (7)
C120.0439 (10)0.0472 (10)0.0681 (12)−0.0011 (7)−0.0023 (8)0.0004 (8)
C130.0534 (11)0.0418 (10)0.0706 (12)0.0031 (8)0.0033 (9)0.0025 (8)
C140.0543 (11)0.0434 (9)0.0506 (10)−0.0084 (7)0.0036 (8)0.0015 (7)
C150.0499 (10)0.0553 (11)0.0673 (12)−0.0016 (8)−0.0093 (9)0.0009 (9)
C160.0559 (11)0.0442 (10)0.0718 (12)0.0069 (8)−0.0075 (9)0.0004 (8)
C170.0664 (12)0.0532 (11)0.0626 (12)−0.0073 (9)−0.0030 (9)0.0002 (9)
O1—C11.3674 (19)C7—H70.9300
O1—C101.4269 (19)C8—C91.414 (2)
N1—C51.310 (2)C9—H90.9300
N1—C41.369 (2)C10—C111.503 (2)
N2—C171.140 (2)C10—H10A0.9700
C1—C91.363 (2)C10—H10B0.9700
C1—C21.410 (2)C11—C121.381 (2)
C2—C31.358 (2)C11—C161.386 (2)
C2—H20.9300C12—C131.377 (2)
C3—C41.409 (2)C12—H120.9300
C3—H30.9300C13—C141.385 (2)
C4—C81.409 (2)C13—H130.9300
C5—C61.398 (3)C14—C151.389 (2)
C5—H50.9300C14—C171.435 (2)
C6—C71.352 (3)C15—C161.373 (2)
C6—H60.9300C15—H150.9300
C7—C81.408 (2)C16—H160.9300
C1—O1—C10117.34 (12)C1—C9—H9120.1
C5—N1—C4116.62 (16)C8—C9—H9120.1
C9—C1—O1125.61 (15)O1—C10—C11108.09 (13)
C9—C1—C2120.38 (15)O1—C10—H10A110.1
O1—C1—C2114.01 (14)C11—C10—H10A110.1
C3—C2—C1120.44 (16)O1—C10—H10B110.1
C3—C2—H2119.8C11—C10—H10B110.1
C1—C2—H2119.8H10A—C10—H10B108.4
C2—C3—C4120.86 (16)C12—C11—C16118.59 (15)
C2—C3—H3119.6C12—C11—C10120.62 (15)
C4—C3—H3119.6C16—C11—C10120.74 (15)
N1—C4—C8122.97 (16)C13—C12—C11121.32 (16)
N1—C4—C3118.47 (15)C13—C12—H12119.3
C8—C4—C3118.53 (15)C11—C12—H12119.3
N1—C5—C6124.62 (18)C12—C13—C14119.39 (16)
N1—C5—H5117.7C12—C13—H13120.3
C6—C5—H5117.7C14—C13—H13120.3
C7—C6—C5119.14 (18)C13—C14—C15120.02 (15)
C7—C6—H6120.4C13—C14—C17120.32 (16)
C5—C6—H6120.4C15—C14—C17119.67 (16)
C6—C7—C8119.31 (17)C16—C15—C14119.63 (16)
C6—C7—H7120.3C16—C15—H15120.2
C8—C7—H7120.3C14—C15—H15120.2
C7—C8—C4117.33 (15)C15—C16—C11121.04 (16)
C7—C8—C9122.75 (15)C15—C16—H16119.5
C4—C8—C9119.89 (15)C11—C16—H16119.5
C1—C9—C8119.88 (15)N2—C17—C14179.4 (2)
C10—O1—C1—C9−0.1 (2)O1—C1—C9—C8178.66 (15)
C10—O1—C1—C2179.55 (14)C2—C1—C9—C8−1.0 (2)
C9—C1—C2—C31.7 (3)C7—C8—C9—C1178.09 (16)
O1—C1—C2—C3−177.98 (16)C4—C8—C9—C1−0.1 (2)
C1—C2—C3—C4−1.3 (3)C1—O1—C10—C11−171.97 (14)
C5—N1—C4—C8−0.4 (3)O1—C10—C11—C12−135.85 (16)
C5—N1—C4—C3177.42 (17)O1—C10—C11—C1646.7 (2)
C2—C3—C4—N1−177.77 (16)C16—C11—C12—C13−0.6 (3)
C2—C3—C4—C80.2 (3)C10—C11—C12—C13−178.12 (16)
C4—N1—C5—C60.5 (3)C11—C12—C13—C140.0 (3)
N1—C5—C6—C7−0.1 (3)C12—C13—C14—C150.7 (3)
C5—C6—C7—C8−0.2 (3)C12—C13—C14—C17−179.84 (16)
C6—C7—C8—C40.3 (2)C13—C14—C15—C16−0.7 (3)
C6—C7—C8—C9−178.00 (17)C17—C14—C15—C16179.81 (17)
N1—C4—C8—C70.1 (2)C14—C15—C16—C110.1 (3)
C3—C4—C8—C7−177.76 (16)C12—C11—C16—C150.6 (3)
N1—C4—C8—C9178.39 (15)C10—C11—C16—C15178.10 (16)
C3—C4—C8—C90.5 (2)
D—H···AD—HH···AD···AD—H···A
C12—H12···Cgi0.932.833.613 (2)142
C13—H13···N1ii0.932.603.398 (2)145
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12⋯Cgi0.932.833.613 (2)142
C13—H13⋯N1ii0.932.603.398 (2)145

Symmetry codes: (i) ; (ii) . Cg is the centroid of the C1–C4/C8/C9 benzene ring.

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