Literature DB >> 22064749

Diaqua-bis-(4-bromo-benzoato-κO)bis-(N,N-diethyl-nicotinamide-κN)manganese(II).

Hacali Necefoğlu, Füreya Elif Ozbek, Vijdan Oztürk, Vedat Adıgüzel, Tuncer Hökelek.   

Abstract

In the crystal structure of the title Mn(II) complex, [Mn(C(7)H(4)BrO(2))(2)(C(10)H(14)N(2)O)(2)(H(2)O)(2)], the Mn(II) cation is located on an inversion center and coordinated by two diethyl-nicotinamide (DENA) ligands, two 4-bromo-benzoate (PBB) anions and two water mol-ecules in a distorted octa-hedral geometry. The dihedral angle between the carboxyl-ate group and the adjacent benzene ring is 3.25 (14)°. In the mol-ecule, the pyridine ring and the benzene ring are oriented at a dihedral angle of 77.24 (5)°. In the crystal, inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into a two-dimensional network. Weak inter-molecular C-H⋯O hydrogen bonds and π-π inter-actions between the pyridine rings of neighbouring mol-ecules [centroid-centroid distance = 3.537 (1) Å] further consolidate the crystal packing.

Entities:  

Year:  2011        PMID: 22064749      PMCID: PMC3200634          DOI: 10.1107/S1600536811031412

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For literature on niacin, see: Krishnamachari (1974 ▶). For information on the nicotinic acid derivative N,N-diethyl­nicotinamide, see: Bigoli et al. (1972 ▶). For related structures, see: Hökelek et al. (1996 ▶, 2009a ▶,b ▶); Hökelek & Necefoğlu (1998 ▶, 2007 ▶); Necefoğlu et al. (2011 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[Mn(C7H4BrO2)2(C10H14N2O)2(H2O)2] M = 847.46 Triclinic, a = 7.2939 (2) Å b = 8.5130 (2) Å c = 16.1252 (4) Å α = 83.970 (3)° β = 79.529 (3)° γ = 68.031 (2)° V = 912.34 (4) Å3 Z = 1 Mo Kα radiation μ = 2.61 mm−1 T = 100 K 0.35 × 0.25 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.462, T max = 0.594 16194 measured reflections 4616 independent reflections 4127 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.073 S = 1.09 4616 reflections 233 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.42 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811031412/xu5285sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811031412/xu5285Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(C7H4BrO2)2(C10H14N2O)2(H2O)2]Z = 1
Mr = 847.46F(000) = 431
Triclinic, P1Dx = 1.542 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.2939 (2) ÅCell parameters from 9256 reflections
b = 8.5130 (2) Åθ = 2.6–28.5°
c = 16.1252 (4) ŵ = 2.61 mm1
α = 83.970 (3)°T = 100 K
β = 79.529 (3)°Block, colorless
γ = 68.031 (2)°0.35 × 0.25 × 0.20 mm
V = 912.34 (4) Å3
Bruker Kappa APEXII CCD area-detector diffractometer4616 independent reflections
Radiation source: fine-focus sealed tube4127 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 28.7°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −9→8
Tmin = 0.462, Tmax = 0.594k = −11→11
16194 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.073H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.0308P)2 + 0.6418P] where P = (Fo2 + 2Fc2)/3
4616 reflections(Δ/σ)max = 0.001
233 parametersΔρmax = 0.42 e Å3
2 restraintsΔρmin = −0.39 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br1−0.75487 (3)−0.83337 (3)0.028844 (11)0.02549 (7)
Mn1−1.5000−1.00000.50000.01072 (8)
O1−1.38994 (18)−0.87032 (15)0.39214 (7)0.0149 (2)
O2−1.58179 (18)−0.86624 (16)0.29746 (8)0.0162 (2)
O3−2.33701 (19)−0.67456 (16)0.62449 (8)0.0180 (3)
O4−1.73146 (19)−1.01296 (16)0.43251 (8)0.0164 (2)
H41−1.695 (5)−0.972 (4)0.3842 (14)0.061 (10)*
H42−1.724 (4)−1.107 (2)0.4215 (17)0.039 (7)*
N1−1.7301 (2)−0.75479 (18)0.55238 (9)0.0135 (3)
N2−2.3337 (2)−0.57656 (18)0.74841 (9)0.0154 (3)
C1−1.4231 (3)−0.8666 (2)0.31747 (10)0.0132 (3)
C2−1.2580 (3)−0.8627 (2)0.24697 (10)0.0122 (3)
C3−1.2803 (3)−0.8670 (2)0.16323 (11)0.0156 (3)
H3−1.3960−0.87570.15110.019*
C4−1.1308 (3)−0.8583 (2)0.09777 (11)0.0167 (3)
H4−1.1453−0.86060.04180.020*
C5−0.9600 (3)−0.8463 (2)0.11768 (11)0.0159 (3)
C6−0.9306 (3)−0.8470 (2)0.20023 (11)0.0158 (3)
H6−0.8128−0.84200.21210.019*
C7−1.0816 (3)−0.8554 (2)0.26481 (10)0.0145 (3)
H7−1.0647−0.85610.32070.017*
C8−1.7011 (3)−0.6072 (2)0.54066 (10)0.0142 (3)
H8−1.5813−0.60550.50950.017*
C9−1.8416 (3)−0.4569 (2)0.57292 (11)0.0158 (3)
H9−1.8164−0.35670.56350.019*
C10−2.0201 (3)−0.4589 (2)0.61946 (11)0.0148 (3)
H10−2.1162−0.36030.64260.018*
C11−2.0531 (3)−0.6112 (2)0.63100 (10)0.0131 (3)
C12−1.9050 (3)−0.7549 (2)0.59574 (10)0.0137 (3)
H12−1.9281−0.85610.60250.016*
C13−2.2514 (3)−0.6235 (2)0.66923 (11)0.0138 (3)
C14−2.5372 (3)−0.5766 (2)0.77833 (12)0.0203 (4)
H14A−2.6183−0.52720.73410.024*
H14B−2.5964−0.50540.82660.024*
C15−2.5430 (3)−0.7523 (2)0.80336 (13)0.0261 (4)
H15A−2.6787−0.74330.82320.039*
H15B−2.4636−0.80210.84740.039*
H15C−2.4902−0.82230.75530.039*
C16−2.2354 (3)−0.5264 (2)0.80695 (11)0.0192 (4)
H16A−2.3176−0.41260.82460.023*
H16B−2.1082−0.52370.77750.023*
C17−2.1988 (4)−0.6441 (3)0.88473 (14)0.0370 (5)
H17A−2.1306−0.60660.91950.056*
H17B−2.1182−0.75720.86780.056*
H17C−2.3246−0.64270.91600.056*
U11U22U33U12U13U23
Br10.02017 (11)0.04066 (12)0.01687 (10)−0.01507 (9)0.00437 (7)−0.00377 (8)
Mn10.00970 (17)0.01062 (15)0.01099 (16)−0.00281 (13)−0.00032 (13)−0.00241 (12)
O10.0165 (6)0.0158 (6)0.0132 (5)−0.0070 (5)−0.0006 (5)−0.0021 (4)
O20.0120 (6)0.0194 (6)0.0172 (6)−0.0056 (5)−0.0026 (5)−0.0003 (5)
O30.0163 (6)0.0198 (6)0.0203 (6)−0.0083 (5)−0.0027 (5)−0.0043 (5)
O40.0175 (6)0.0174 (6)0.0167 (6)−0.0085 (5)−0.0031 (5)−0.0022 (5)
N10.0128 (7)0.0138 (6)0.0136 (6)−0.0042 (5)−0.0019 (5)−0.0025 (5)
N20.0155 (7)0.0146 (6)0.0152 (7)−0.0055 (6)0.0013 (6)−0.0024 (5)
C10.0151 (8)0.0084 (7)0.0138 (7)−0.0024 (6)0.0003 (6)−0.0022 (5)
C20.0121 (8)0.0104 (7)0.0130 (7)−0.0026 (6)−0.0011 (6)−0.0021 (6)
C30.0140 (8)0.0174 (8)0.0158 (8)−0.0056 (7)−0.0024 (6)−0.0022 (6)
C40.0183 (9)0.0187 (8)0.0124 (7)−0.0057 (7)−0.0014 (7)−0.0030 (6)
C50.0142 (8)0.0176 (8)0.0151 (8)−0.0061 (7)0.0018 (6)−0.0023 (6)
C60.0126 (8)0.0178 (8)0.0181 (8)−0.0065 (7)−0.0031 (6)−0.0009 (6)
C70.0179 (9)0.0138 (7)0.0125 (7)−0.0062 (7)−0.0022 (6)−0.0019 (6)
C80.0126 (8)0.0157 (7)0.0150 (7)−0.0063 (6)−0.0014 (6)−0.0011 (6)
C90.0188 (9)0.0133 (7)0.0172 (8)−0.0076 (7)−0.0028 (7)−0.0017 (6)
C100.0158 (8)0.0112 (7)0.0155 (7)−0.0026 (6)−0.0009 (6)−0.0040 (6)
C110.0129 (8)0.0154 (7)0.0114 (7)−0.0053 (6)−0.0019 (6)−0.0020 (6)
C120.0141 (8)0.0120 (7)0.0150 (7)−0.0048 (6)−0.0019 (6)−0.0014 (6)
C130.0132 (8)0.0095 (7)0.0165 (8)−0.0021 (6)−0.0008 (6)−0.0016 (6)
C140.0173 (9)0.0177 (8)0.0233 (9)−0.0068 (7)0.0066 (7)−0.0053 (7)
C150.0253 (10)0.0219 (9)0.0304 (10)−0.0119 (8)0.0064 (8)−0.0034 (8)
C160.0248 (10)0.0197 (8)0.0146 (8)−0.0098 (7)−0.0015 (7)−0.0034 (6)
C170.0505 (15)0.0392 (12)0.0281 (11)−0.0209 (11)−0.0191 (11)0.0106 (9)
Br1—C51.9009 (17)C6—H60.9300
Mn1—O12.1542 (12)C7—C21.393 (2)
Mn1—O1i2.1542 (12)C7—H70.9300
Mn1—O42.2088 (13)C8—C91.387 (2)
Mn1—O4i2.2089 (13)C8—H80.9300
Mn1—N12.2632 (14)C9—H90.9300
Mn1—N1i2.2632 (14)C10—C91.385 (2)
O1—C11.266 (2)C10—C111.393 (2)
O2—C11.256 (2)C10—H100.9300
O3—C131.238 (2)C11—C131.503 (2)
O4—H410.860 (18)C12—C111.386 (2)
O4—H420.823 (17)C12—H120.9300
N1—C81.339 (2)C14—C151.521 (2)
N1—C121.339 (2)C14—H14A0.9700
N2—C131.341 (2)C14—H14B0.9700
N2—C141.475 (2)C15—H15A0.9600
N2—C161.465 (2)C15—H15B0.9600
C1—C21.506 (2)C15—H15C0.9600
C3—C21.395 (2)C16—C171.518 (3)
C3—H30.9300C16—H16A0.9700
C4—C31.391 (2)C16—H16B0.9700
C4—C51.383 (3)C17—H17A0.9600
C4—H40.9300C17—H17B0.9600
C5—C61.385 (2)C17—H17C0.9600
C6—C71.389 (2)
O1i—Mn1—O1180.000 (1)C6—C7—C2120.84 (15)
O1—Mn1—O490.55 (5)C6—C7—H7119.6
O1i—Mn1—O489.45 (5)N1—C8—C9122.95 (16)
O1—Mn1—O4i89.45 (5)N1—C8—H8118.5
O1i—Mn1—O4i90.55 (5)C9—C8—H8118.5
O4—Mn1—O4i180.00 (5)C8—C9—H9120.6
O1—Mn1—N192.44 (5)C10—C9—C8118.76 (15)
O1i—Mn1—N187.56 (5)C10—C9—H9120.6
O1—Mn1—N1i87.56 (5)C9—C10—C11118.77 (15)
O1i—Mn1—N1i92.44 (5)C9—C10—H10120.6
O4—Mn1—N187.02 (5)C11—C10—H10120.6
O4i—Mn1—N192.98 (5)C10—C11—C13123.27 (15)
O4—Mn1—N1i92.98 (5)C12—C11—C10118.50 (15)
O4i—Mn1—N1i87.02 (5)C12—C11—C13117.68 (14)
N1—Mn1—N1i180.0N1—C12—C11123.06 (15)
C1—O1—Mn1125.95 (11)N1—C12—H12118.5
Mn1—O4—H4198 (2)C11—C12—H12118.5
Mn1—O4—H42118 (2)O3—C13—N2121.63 (16)
H42—O4—H41103 (3)O3—C13—C11117.65 (15)
C8—N1—Mn1122.84 (11)N2—C13—C11120.70 (15)
C12—N1—Mn1119.21 (11)N2—C14—C15113.64 (16)
C12—N1—C8117.93 (15)N2—C14—H14A108.8
C13—N2—C14117.30 (15)N2—C14—H14B108.8
C13—N2—C16124.64 (15)C15—C14—H14A108.8
C16—N2—C14118.06 (14)C15—C14—H14B108.8
O1—C1—C2117.11 (15)H14A—C14—H14B107.7
O2—C1—O1125.40 (15)C14—C15—H15A109.5
O2—C1—C2117.49 (14)C14—C15—H15B109.5
C3—C2—C1120.22 (15)C14—C15—H15C109.5
C7—C2—C1120.33 (15)H15A—C15—H15B109.5
C7—C2—C3119.45 (15)H15A—C15—H15C109.5
C2—C3—H3119.8H15B—C15—H15C109.5
C4—C3—C2120.44 (16)N2—C16—C17113.53 (16)
C4—C3—H3119.8N2—C16—H16A108.9
C3—C4—H4120.7N2—C16—H16B108.9
C5—C4—C3118.55 (16)C17—C16—H16A108.9
C5—C4—H4120.7C17—C16—H16B108.9
C4—C5—Br1119.00 (13)H16A—C16—H16B107.7
C4—C5—C6122.43 (16)C16—C17—H17A109.5
C6—C5—Br1118.55 (13)C16—C17—H17B109.5
C5—C6—C7118.23 (16)C16—C17—H17C109.5
C5—C6—H6120.9H17A—C17—H17B109.5
C7—C6—H6120.9H17A—C17—H17C109.5
C2—C7—H7119.6H17B—C17—H17C109.5
O4—Mn1—O1—C1−18.28 (14)C14—N2—C16—C1763.1 (2)
O4i—Mn1—O1—C1161.72 (14)O1—C1—C2—C3176.80 (15)
N1—Mn1—O1—C1−105.33 (14)O1—C1—C2—C7−3.0 (2)
N1i—Mn1—O1—C174.67 (14)O2—C1—C2—C3−3.0 (2)
O1—Mn1—N1—C8−31.20 (13)O2—C1—C2—C7177.19 (14)
O1i—Mn1—N1—C8148.80 (13)C4—C3—C2—C1178.07 (15)
O1—Mn1—N1—C12147.52 (12)C4—C3—C2—C7−2.1 (2)
O1i—Mn1—N1—C12−32.48 (12)C3—C4—C5—Br1−179.73 (13)
O4—Mn1—N1—C8−121.63 (13)C3—C4—C5—C61.7 (3)
O4i—Mn1—N1—C858.37 (13)C5—C4—C3—C20.3 (3)
O4—Mn1—N1—C1257.09 (13)Br1—C5—C6—C7179.61 (13)
O4i—Mn1—N1—C12−122.91 (13)C4—C5—C6—C7−1.9 (3)
Mn1—O1—C1—O233.9 (2)C5—C6—C7—C2−0.1 (2)
Mn1—O1—C1—C2−145.88 (11)C6—C7—C2—C1−178.19 (15)
Mn1—N1—C8—C9−179.79 (13)C6—C7—C2—C32.0 (2)
C12—N1—C8—C91.5 (2)N1—C8—C9—C100.1 (3)
Mn1—N1—C12—C11179.07 (12)C11—C10—C9—C8−1.0 (3)
C8—N1—C12—C11−2.1 (2)C9—C10—C11—C120.4 (2)
C14—N2—C13—O3−4.2 (2)C9—C10—C11—C13−170.84 (16)
C14—N2—C13—C11174.13 (15)C10—C11—C13—O3117.15 (18)
C16—N2—C13—O3175.47 (16)C10—C11—C13—N2−61.2 (2)
C16—N2—C13—C11−6.2 (2)C12—C11—C13—O3−54.2 (2)
C13—N2—C14—C1578.2 (2)C12—C11—C13—N2127.49 (17)
C16—N2—C14—C15−101.50 (19)N1—C12—C11—C101.2 (3)
C13—N2—C16—C17−116.6 (2)N1—C12—C11—C13172.96 (15)
D—H···AD—HH···AD···AD—H···A
O4—H41···O20.86 (3)1.82 (3)2.6606 (18)165 (3)
O4—H42···O3ii0.82 (2)1.92 (3)2.742 (2)166 (3)
C6—H6···O2iii0.932.303.168 (3)155
C10—H10···O2iv0.932.443.353 (2)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H41⋯O20.86 (3)1.82 (3)2.6606 (18)165 (3)
O4—H42⋯O30.82 (2)1.92 (3)2.742 (2)166 (3)
C6—H6⋯O2i0.932.303.168 (3)155
C10—H10⋯O20.932.443.353 (2)168

Symmetry code: (i) .

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6.  Structure validation in chemical crystallography.

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