| Literature DB >> 22058973 |
M Sukeri M Yusof, Nurwahyuni A Mushtari, Maisara A Kadir, Bohari M Yamin.
Abstract
The mol-ecule of the title compound, C(14)H(12)ClN(3)OS, consists of three approximately planar fragments: the central thio-urea group, the chloro-phenyl group and the picolyl (3-methyl-pyridin-2-yl) group with a maximum of 0.035 (2)° for an N atom from the mean square plane of the central thiourea group. The central fragment forms dihedral angles of 33.30 (8) and 76.78 (8)° with the chloro-phenyl and picolyl groups, respectively. With respect to the thio-urea C-N bonds, the 4-chloro-benzoyl group is positioned trans to the thiono S atoms, whereas the picolyl group lies in a cis position to it. The mol-ecular conformation is stabilized by an intra-molecular N-H⋯O hydrogen bond. In the crystal, mol-ecules are linked by inter-molecular C-H⋯N hydrogen bonds, forming chains along the a axis.Entities:
Year: 2011 PMID: 22058973 PMCID: PMC3200797 DOI: 10.1107/S1600536811032375
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H12ClN3OS | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 699 reflections |
| θ = 1.6–28.0° | |
| µ = 0.41 mm−1 | |
| β = 93.405 (4)° | Slab, colourless |
| 0.44 × 0.31 × 0.14 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 3421 independent reflections |
| Radiation source: fine-focus sealed tube | 2188 reflections with |
| graphite | |
| Detector resolution: 83.66 pixels mm-1 | θmax = 28.0°, θmin = 1.6° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 9917 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3421 reflections | (Δ/σ)max = 0.001 |
| 181 parameters | Δρmax = 0.37 e Å−3 |
| 0 restraints | Δρmin = −0.17 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 1.21606 (9) | 0.54075 (13) | 0.35489 (3) | 0.0897 (3) | |
| S1 | 0.45565 (8) | 0.34425 (9) | 0.08001 (2) | 0.0597 (2) | |
| O1 | 0.4546 (2) | 0.6680 (3) | 0.23221 (6) | 0.0657 (5) | |
| N1 | 0.5639 (2) | 0.4758 (3) | 0.17178 (7) | 0.0496 (5) | |
| H1A | 0.6480 | 0.4014 | 0.1669 | 0.060* | |
| N2 | 0.3126 (2) | 0.6067 (3) | 0.13694 (7) | 0.0501 (5) | |
| H2A | 0.3116 | 0.6688 | 0.1658 | 0.060* | |
| N3 | 0.0289 (2) | 0.5707 (3) | 0.10740 (8) | 0.0604 (5) | |
| C2 | 0.8891 (3) | 0.5112 (3) | 0.23027 (9) | 0.0485 (5) | |
| H2B | 0.8932 | 0.4886 | 0.1946 | 0.058* | |
| C3 | 1.0381 (3) | 0.5047 (3) | 0.26218 (10) | 0.0537 (6) | |
| H3A | 1.1421 | 0.4772 | 0.2483 | 0.064* | |
| C4 | 1.0291 (3) | 0.5398 (3) | 0.31489 (9) | 0.0552 (6) | |
| C5 | 0.8769 (3) | 0.5791 (3) | 0.33639 (9) | 0.0582 (6) | |
| H5A | 0.8734 | 0.6016 | 0.3721 | 0.070* | |
| C6 | 0.7299 (3) | 0.5850 (3) | 0.30452 (8) | 0.0537 (6) | |
| H6A | 0.6264 | 0.6120 | 0.3188 | 0.064* | |
| C1 | 0.7344 (3) | 0.5511 (3) | 0.25111 (8) | 0.0429 (5) | |
| C7 | 0.5720 (3) | 0.5711 (3) | 0.21855 (8) | 0.0465 (5) | |
| C8 | 0.4375 (3) | 0.4836 (3) | 0.13118 (8) | 0.0446 (5) | |
| C9 | 0.1793 (3) | 0.6406 (3) | 0.09725 (8) | 0.0437 (5) | |
| C10 | −0.0985 (3) | 0.6033 (4) | 0.07152 (12) | 0.0758 (8) | |
| H10A | −0.2062 | 0.5565 | 0.0777 | 0.091* | |
| C11 | −0.0802 (4) | 0.7006 (4) | 0.02671 (12) | 0.0784 (9) | |
| H11A | −0.1723 | 0.7180 | 0.0026 | 0.094* | |
| C12 | 0.0767 (4) | 0.7723 (4) | 0.01786 (10) | 0.0689 (7) | |
| H12A | 0.0919 | 0.8398 | −0.0127 | 0.083* | |
| C13 | 0.2135 (3) | 0.7461 (3) | 0.05369 (8) | 0.0508 (5) | |
| C14 | 0.3859 (4) | 0.8282 (4) | 0.04571 (12) | 0.0781 (8) | |
| H14A | 0.3823 | 0.8960 | 0.0132 | 0.117* | |
| H14B | 0.4686 | 0.7289 | 0.0448 | 0.117* | |
| H14C | 0.4172 | 0.9125 | 0.0740 | 0.117* |
| Cl1 | 0.0655 (5) | 0.1158 (7) | 0.0829 (5) | −0.0260 (4) | −0.0364 (4) | 0.0270 (4) |
| S1 | 0.0599 (4) | 0.0634 (4) | 0.0533 (4) | 0.0146 (3) | −0.0178 (3) | −0.0192 (3) |
| O1 | 0.0578 (10) | 0.0846 (13) | 0.0529 (10) | 0.0209 (9) | −0.0111 (8) | −0.0216 (9) |
| N1 | 0.0472 (10) | 0.0533 (11) | 0.0462 (10) | 0.0133 (8) | −0.0145 (8) | −0.0115 (8) |
| N2 | 0.0474 (10) | 0.0602 (12) | 0.0416 (10) | 0.0094 (9) | −0.0065 (8) | −0.0091 (8) |
| N3 | 0.0439 (11) | 0.0756 (14) | 0.0614 (12) | 0.0035 (10) | 0.0013 (9) | 0.0011 (10) |
| C2 | 0.0529 (13) | 0.0471 (13) | 0.0443 (12) | −0.0004 (10) | −0.0076 (10) | −0.0045 (9) |
| C3 | 0.0443 (13) | 0.0532 (14) | 0.0629 (15) | −0.0014 (10) | −0.0043 (11) | 0.0023 (11) |
| C4 | 0.0547 (14) | 0.0499 (14) | 0.0579 (14) | −0.0154 (11) | −0.0227 (12) | 0.0120 (11) |
| C5 | 0.0666 (16) | 0.0654 (16) | 0.0411 (12) | −0.0146 (13) | −0.0087 (11) | 0.0011 (11) |
| C6 | 0.0521 (13) | 0.0615 (15) | 0.0467 (13) | −0.0054 (11) | −0.0057 (10) | −0.0036 (11) |
| C1 | 0.0483 (12) | 0.0382 (11) | 0.0408 (11) | −0.0016 (9) | −0.0078 (9) | −0.0026 (9) |
| C7 | 0.0478 (12) | 0.0487 (13) | 0.0423 (12) | 0.0026 (10) | −0.0046 (10) | −0.0046 (10) |
| C8 | 0.0431 (12) | 0.0467 (12) | 0.0429 (11) | 0.0010 (9) | −0.0068 (9) | −0.0021 (9) |
| C9 | 0.0426 (12) | 0.0454 (12) | 0.0422 (11) | 0.0077 (9) | −0.0047 (9) | −0.0048 (9) |
| C10 | 0.0441 (14) | 0.092 (2) | 0.090 (2) | 0.0071 (14) | −0.0097 (14) | −0.0119 (18) |
| C11 | 0.074 (2) | 0.083 (2) | 0.0737 (19) | 0.0307 (16) | −0.0323 (15) | −0.0139 (16) |
| C12 | 0.096 (2) | 0.0565 (16) | 0.0528 (15) | 0.0230 (15) | −0.0098 (14) | 0.0027 (12) |
| C13 | 0.0644 (15) | 0.0406 (12) | 0.0471 (12) | 0.0067 (11) | 0.0003 (11) | −0.0024 (10) |
| C14 | 0.088 (2) | 0.0666 (18) | 0.0811 (19) | −0.0112 (15) | 0.0187 (16) | 0.0070 (15) |
| Cl1—C4 | 1.738 (2) | C5—C6 | 1.372 (3) |
| S1—C8 | 1.654 (2) | C5—H5A | 0.9300 |
| O1—C7 | 1.218 (3) | C6—C1 | 1.390 (3) |
| N1—C7 | 1.373 (3) | C6—H6A | 0.9300 |
| N1—C8 | 1.394 (2) | C1—C7 | 1.487 (3) |
| N1—H1A | 0.8600 | C9—C13 | 1.382 (3) |
| N2—C8 | 1.328 (3) | C10—C11 | 1.354 (4) |
| N2—C9 | 1.434 (3) | C10—H10A | 0.9300 |
| N2—H2A | 0.8600 | C11—C12 | 1.363 (4) |
| N3—C9 | 1.320 (3) | C11—H11A | 0.9300 |
| N3—C10 | 1.337 (3) | C12—C13 | 1.382 (3) |
| C2—C3 | 1.385 (3) | C12—H12A | 0.9300 |
| C2—C1 | 1.383 (3) | C13—C14 | 1.498 (4) |
| C2—H2B | 0.9300 | C14—H14A | 0.9600 |
| C3—C4 | 1.377 (3) | C14—H14B | 0.9600 |
| C3—H3A | 0.9300 | C14—H14C | 0.9600 |
| C4—C5 | 1.372 (4) | ||
| C7—N1—C8 | 128.59 (18) | O1—C7—C1 | 122.05 (18) |
| C7—N1—H1A | 115.7 | N1—C7—C1 | 115.77 (19) |
| C8—N1—H1A | 115.7 | N2—C8—N1 | 116.12 (18) |
| C8—N2—C9 | 122.93 (17) | N2—C8—S1 | 125.52 (16) |
| C8—N2—H2A | 118.5 | N1—C8—S1 | 118.34 (15) |
| C9—N2—H2A | 118.5 | N3—C9—C13 | 125.6 (2) |
| C9—N3—C10 | 116.1 (2) | N3—C9—N2 | 114.81 (19) |
| C3—C2—C1 | 120.5 (2) | C13—C9—N2 | 119.6 (2) |
| C3—C2—H2B | 119.7 | N3—C10—C11 | 123.9 (3) |
| C1—C2—H2B | 119.7 | N3—C10—H10A | 118.1 |
| C4—C3—C2 | 118.7 (2) | C11—C10—H10A | 118.1 |
| C4—C3—H3A | 120.6 | C10—C11—C12 | 118.3 (3) |
| C2—C3—H3A | 120.6 | C10—C11—H11A | 120.9 |
| C3—C4—C5 | 121.7 (2) | C12—C11—H11A | 120.9 |
| C3—C4—Cl1 | 119.1 (2) | C11—C12—C13 | 120.8 (2) |
| C5—C4—Cl1 | 119.12 (19) | C11—C12—H12A | 119.6 |
| C6—C5—C4 | 119.2 (2) | C13—C12—H12A | 119.6 |
| C6—C5—H5A | 120.4 | C9—C13—C12 | 115.3 (2) |
| C4—C5—H5A | 120.4 | C9—C13—C14 | 122.8 (2) |
| C5—C6—C1 | 120.6 (2) | C12—C13—C14 | 121.9 (2) |
| C5—C6—H6A | 119.7 | C13—C14—H14A | 109.5 |
| C1—C6—H6A | 119.7 | C13—C14—H14B | 109.5 |
| C6—C1—C2 | 119.2 (2) | H14A—C14—H14B | 109.5 |
| C6—C1—C7 | 117.6 (2) | C13—C14—H14C | 109.5 |
| C2—C1—C7 | 123.05 (19) | H14A—C14—H14C | 109.5 |
| O1—C7—N1 | 122.2 (2) | H14B—C14—H14C | 109.5 |
| H··· | ||||
| N2—H2A···O1 | 0.86 | 1.98 | 2.655 (2) | 135 |
| C2—H2B···N3i | 0.93 | 2.59 | 3.417 (3) | 148 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 1.98 | 2.655 (2) | 135 |
| C2—H2 | 0.93 | 2.59 | 3.417 (3) | 148 |
Symmetry code: (i) .