Literature DB >> 22058914

5-(4-Bromo-2-nitro-phen-yl)-1,3,4-thia-diazol-2-amine.

Jian-Qiang Zhang1, Qiu He, Qianghua Jiang, Haipin Mu, Rong Wan.   

Abstract

The title compound, C(8)H(5)BrN(4)O(2)S, was synthesized by the reaction of 4-bromo-2-nitro-benzoic acid with thio-semi-carbazide. The dihedral angle between the thia-diazole and benzene rings is 40.5 (2)°. In the crystal, the strongest N-H⋯N inter-molecular hydrogen bond, between the amine group and one thia-diazole N atom, forms centrosymmetric dimers. The other amine H atom extends the supra-molecular network, forming an N-H⋯N contact with the other thia-diazole N atom.

Entities:  

Year:  2011        PMID: 22058914      PMCID: PMC3200604          DOI: 10.1107/S1600536811030868

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of 1,3,4-thia­diazole derivatives, see: Nakagawa et al. (1996 ▶); Wang et al. (1999 ▶).

Experimental

Crystal data

C8H5BrN4O2S M = 301.13 Monoclinic, a = 11.231 (2) Å b = 9.2580 (19) Å c = 10.868 (2) Å β = 113.08 (3)° V = 1039.6 (4) Å3 Z = 4 Mo Kα radiation μ = 4.14 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.491, T max = 0.682 3909 measured reflections 1920 independent reflections 1409 reflections with I > 2σ(I) R int = 0.116 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.104 S = 1.01 1920 reflections 152 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.55 e Å−3 Δρmin = −0.97 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo,1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811030868/bh2371sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811030868/bh2371Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811030868/bh2371Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H5BrN4O2SF(000) = 592
Mr = 301.13Dx = 1.924 Mg m3
Monoclinic, P21/cMelting point: 506 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 11.231 (2) ÅCell parameters from 25 reflections
b = 9.2580 (19) Åθ = 10–13°
c = 10.868 (2) ŵ = 4.14 mm1
β = 113.08 (3)°T = 293 K
V = 1039.6 (4) Å3Block, yellow
Z = 40.20 × 0.10 × 0.10 mm
Enraf–Nonius CAD-4 diffractometer1409 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.116
graphiteθmax = 25.4°, θmin = 2.0°
ω/2θ scansh = −13→12
Absorption correction: ψ scan (North et al., 1968)k = −11→11
Tmin = 0.491, Tmax = 0.682l = 0→13
3909 measured reflections3 standard reflections every 200 reflections
1920 independent reflections intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.104w = 1/[σ2(Fo2) + (0.025P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
1920 reflectionsΔρmax = 0.55 e Å3
152 parametersΔρmin = −0.97 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 constraintsExtinction coefficient: 0.0114 (8)
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
Br0.11486 (5)0.01063 (5)0.19612 (6)0.0512 (2)
S0.34305 (13)0.66328 (12)0.58298 (11)0.0389 (3)
C10.2933 (5)0.3456 (5)0.4493 (4)0.0398 (11)
H1A0.34370.35510.54020.048*
N10.1367 (4)0.5710 (4)0.1441 (4)0.0370 (9)
O10.1374 (4)0.5588 (4)0.0330 (3)0.0585 (10)
O20.0937 (3)0.6740 (3)0.1818 (3)0.0517 (10)
N20.3728 (4)0.6948 (4)0.3620 (3)0.0357 (9)
C20.2492 (5)0.2112 (5)0.3991 (5)0.0418 (12)
H2B0.27170.13080.45490.050*
N30.4262 (4)0.8176 (4)0.4373 (3)0.0339 (9)
C30.1724 (4)0.1958 (4)0.2670 (5)0.0360 (10)
C40.1413 (5)0.3137 (5)0.1816 (4)0.0339 (11)
H4A0.09200.30290.09070.041*
N40.4674 (5)0.9189 (5)0.6472 (4)0.0460 (12)
H4B0.486 (6)0.996 (7)0.630 (6)0.055*
H4C0.446 (5)0.910 (6)0.709 (6)0.055*
C50.1853 (4)0.4459 (5)0.2350 (4)0.0331 (10)
C60.2654 (4)0.4671 (4)0.3696 (4)0.0283 (9)
C70.3245 (4)0.6062 (5)0.4235 (4)0.0303 (9)
C80.4186 (4)0.8148 (4)0.5534 (4)0.0318 (10)
U11U22U33U12U13U23
Br0.0612 (3)0.0292 (3)0.0646 (4)−0.0078 (3)0.0262 (3)−0.0142 (2)
S0.0593 (7)0.0333 (6)0.0300 (5)−0.0143 (6)0.0240 (5)−0.0042 (5)
C10.045 (3)0.037 (2)0.031 (2)0.001 (2)0.008 (2)0.000 (2)
N10.037 (2)0.036 (2)0.031 (2)0.001 (2)0.0059 (17)0.0040 (17)
O10.073 (2)0.056 (2)0.0359 (18)−0.001 (2)0.0100 (17)0.0107 (18)
O20.060 (2)0.0277 (16)0.057 (2)0.0082 (18)0.0115 (19)0.0035 (16)
N20.047 (2)0.0326 (17)0.0289 (18)−0.010 (2)0.0163 (17)−0.0061 (16)
C20.046 (3)0.026 (2)0.044 (3)−0.003 (2)0.008 (2)0.005 (2)
N30.045 (2)0.0318 (18)0.0267 (18)−0.0118 (19)0.0163 (17)−0.0039 (15)
C30.034 (2)0.0213 (18)0.053 (3)−0.005 (2)0.017 (2)−0.009 (2)
C40.039 (3)0.031 (2)0.028 (2)−0.002 (2)0.0086 (19)−0.0053 (18)
N40.076 (3)0.036 (2)0.033 (2)−0.023 (2)0.028 (2)−0.0124 (19)
C50.034 (2)0.0246 (18)0.035 (2)−0.001 (2)0.007 (2)−0.0030 (19)
C60.034 (2)0.0274 (19)0.0261 (19)−0.005 (2)0.0140 (17)−0.0026 (17)
C70.034 (2)0.031 (2)0.028 (2)−0.004 (2)0.0140 (19)−0.0012 (18)
C80.035 (2)0.027 (2)0.031 (2)−0.007 (2)0.0109 (19)−0.0013 (18)
Br—C31.887 (4)C2—C31.362 (7)
S—C81.734 (4)C2—H2B0.9300
S—C71.744 (4)N3—C81.297 (5)
C1—C21.371 (6)C3—C41.386 (6)
C1—C61.379 (6)C4—C51.361 (6)
C1—H1A0.9300C4—H4A0.9300
N1—O21.210 (5)N4—C81.353 (6)
N1—O11.215 (5)N4—H4B0.79 (6)
N1—C51.481 (6)N4—H4C0.81 (6)
N2—C71.303 (5)C5—C61.399 (6)
N2—N31.392 (4)C6—C71.462 (6)
C8—S—C786.4 (2)C3—C4—H4A121.0
C2—C1—C6122.2 (4)C8—N4—H4B122 (4)
C2—C1—H1A118.9C8—N4—H4C113 (4)
C6—C1—H1A118.9H4B—N4—H4C119 (6)
O2—N1—O1124.7 (4)C4—C5—C6123.3 (4)
O2—N1—C5118.8 (4)C4—C5—N1116.2 (3)
O1—N1—C5116.4 (4)C6—C5—N1120.4 (4)
C7—N2—N3112.4 (3)C1—C6—C5115.9 (4)
C3—C2—C1119.7 (4)C1—C6—C7120.7 (3)
C3—C2—H2B120.2C5—C6—C7123.2 (4)
C1—C2—H2B120.2N2—C7—C6124.3 (4)
C8—N3—N2112.3 (3)N2—C7—S114.1 (3)
C2—C3—C4120.8 (4)C6—C7—S121.6 (3)
C2—C3—Br119.9 (3)N3—C8—N4123.8 (4)
C4—C3—Br119.1 (3)N3—C8—S114.8 (3)
C5—C4—C3118.0 (4)N4—C8—S121.3 (3)
C5—C4—H4A121.0
C6—C1—C2—C3−1.8 (8)N1—C5—C6—C1172.8 (4)
C7—N2—N3—C81.5 (5)C4—C5—C6—C7172.7 (5)
C1—C2—C3—C42.1 (8)N1—C5—C6—C7−11.3 (7)
C1—C2—C3—Br178.4 (4)N3—N2—C7—C6−178.4 (4)
C2—C3—C4—C5−2.8 (7)N3—N2—C7—S−1.3 (5)
Br—C3—C4—C5−179.2 (4)C1—C6—C7—N2135.9 (5)
C3—C4—C5—C63.5 (8)C5—C6—C7—N2−39.8 (7)
C3—C4—C5—N1−172.6 (4)C1—C6—C7—S−40.9 (6)
O2—N1—C5—C4130.8 (5)C5—C6—C7—S143.4 (4)
O1—N1—C5—C4−45.7 (6)C8—S—C7—N20.7 (4)
O2—N1—C5—C6−45.5 (6)C8—S—C7—C6177.8 (4)
O1—N1—C5—C6138.1 (5)N2—N3—C8—N4177.6 (4)
C2—C1—C6—C52.3 (7)N2—N3—C8—S−1.0 (5)
C2—C1—C6—C7−173.7 (5)C7—S—C8—N30.2 (4)
C4—C5—C6—C1−3.1 (7)C7—S—C8—N4−178.4 (4)
D—H···AD—HH···AD···AD—H···A
N4—H4B···N3i0.79 (7)2.25 (7)3.014 (6)165 (7)
N4—H4C···N2ii0.80 (6)2.34 (6)3.103 (6)161 (6)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H4B⋯N3i0.79 (7)2.25 (7)3.014 (6)165 (7)
N4—H4C⋯N2ii0.80 (6)2.34 (6)3.103 (6)161 (6)

Symmetry codes: (i) ; (ii) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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3.  Crystal structures of the co-crystalline adduct 5-(4-bromo-phen-yl)-1,3,4-thia-diazol-2-amine-4-nitro-benzoic acid (1/1) and the salt 2-amino-5-(4-bromo-phen-yl)-1,3,4-thia-diazol-3-ium 2-carb-oxy-4,6-di-nitro-phenolate.

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