| Literature DB >> 22058813 |
Sundaramoorthy Gomathi1, Packianathan Thomas Muthiah.
Abstract
In the crystal structure of the title salt, C(4)H(8)N(5) (+)·BF(4) (-), centrosymmetrically related cations undergo base pairing via a pair of N-H⋯N hydrogen bonds, forming an R(2) (2)(8) ring motif. The cations and anions inter-act via N-H⋯F hydrogen bonds, generating supra-molecular layers parallel to ([Formula: see text]20), which are in turn linked into a three-dimensional network, forming rings of R(6) (6)(24) graph-set motif. The crystal structure is further stabilized by π-π stacking inter-actions [centroid-centroid distance = 3.3361 (12) Å].Entities:
Year: 2011 PMID: 22058813 PMCID: PMC3201368 DOI: 10.1107/S1600536811038797
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H8N5+·BF4− | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2196 reflections | |
| θ = 2.7–28.4° | |
| µ = 0.16 mm−1 | |
| α = 63.931 (2)° | |
| β = 83.209 (3)° | Prism, colourless |
| γ = 85.057 (3)° | 0.06 × 0.05 × 0.04 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 2196 independent reflections |
| Radiation source: fine-focus sealed tube | 1842 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.4°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 8850 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2196 reflections | (Δ/σ)max < 0.001 |
| 128 parameters | Δρmax = 0.52 e Å−3 |
| 0 restraints | Δρmin = −0.54 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| N1 | 0.5137 (2) | 0.7576 (2) | 0.7766 (2) | 0.0388 (5) | |
| N2 | 0.6729 (3) | 0.8579 (3) | 0.9371 (3) | 0.0502 (6) | |
| N3 | 0.3894 (2) | 0.7141 (2) | 1.0587 (2) | 0.0408 (5) | |
| N4 | 0.1028 (3) | 0.5754 (3) | 1.1593 (2) | 0.0524 (6) | |
| N5 | 0.2262 (2) | 0.6115 (2) | 0.8873 (2) | 0.0392 (5) | |
| C2 | 0.5241 (3) | 0.7772 (3) | 0.9261 (3) | 0.0376 (5) | |
| C4 | 0.2430 (3) | 0.6367 (3) | 1.0340 (3) | 0.0373 (5) | |
| C6 | 0.3630 (3) | 0.6734 (3) | 0.7627 (3) | 0.0380 (5) | |
| C7 | 0.3631 (4) | 0.6521 (4) | 0.5987 (3) | 0.0569 (8) | |
| F1 | 0.7776 (3) | 0.9140 (2) | 0.4910 (2) | 0.0732 (6) | |
| F2 | 1.0031 (4) | 0.9604 (5) | 0.2703 (4) | 0.1389 (14) | |
| F3 | 0.9060 (4) | 0.6845 (3) | 0.4382 (3) | 0.1076 (9) | |
| F4 | 0.7146 (3) | 0.8835 (4) | 0.2567 (3) | 0.1057 (10) | |
| B1 | 0.8547 (3) | 0.8604 (3) | 0.3634 (3) | 0.0433 (6) | |
| H1 | 0.60230 | 0.79840 | 0.69160 | 0.0470* | |
| H2A | 0.75990 | 0.89850 | 0.85050 | 0.0600* | |
| H2B | 0.68300 | 0.86990 | 1.03080 | 0.0600* | |
| H4A | 0.10620 | 0.58540 | 1.25500 | 0.0630* | |
| H4B | 0.00750 | 0.52520 | 1.14560 | 0.0630* | |
| H7A | 0.28340 | 0.55470 | 0.61960 | 0.0850* | |
| H7B | 0.49230 | 0.62670 | 0.56130 | 0.0850* | |
| H7C | 0.31370 | 0.76110 | 0.50920 | 0.0850* |
| N1 | 0.0350 (8) | 0.0420 (8) | 0.0385 (8) | −0.0107 (6) | 0.0081 (6) | −0.0177 (7) |
| N2 | 0.0418 (9) | 0.0603 (11) | 0.0509 (10) | −0.0202 (8) | 0.0034 (7) | −0.0250 (9) |
| N3 | 0.0361 (8) | 0.0496 (9) | 0.0389 (8) | −0.0098 (7) | 0.0015 (6) | −0.0209 (7) |
| N4 | 0.0405 (9) | 0.0788 (13) | 0.0457 (10) | −0.0223 (9) | 0.0106 (7) | −0.0340 (10) |
| N5 | 0.0337 (8) | 0.0458 (9) | 0.0423 (9) | −0.0083 (6) | 0.0024 (6) | −0.0232 (7) |
| C2 | 0.0340 (9) | 0.0364 (9) | 0.0413 (10) | −0.0052 (7) | −0.0006 (7) | −0.0158 (7) |
| C4 | 0.0325 (9) | 0.0412 (9) | 0.0383 (9) | −0.0044 (7) | 0.0013 (7) | −0.0180 (7) |
| C6 | 0.0362 (9) | 0.0396 (9) | 0.0398 (9) | −0.0040 (7) | 0.0017 (7) | −0.0196 (8) |
| C7 | 0.0583 (14) | 0.0756 (16) | 0.0474 (12) | −0.0189 (12) | 0.0079 (10) | −0.0366 (12) |
| F1 | 0.0826 (11) | 0.0843 (11) | 0.0659 (10) | −0.0301 (9) | 0.0316 (8) | −0.0493 (9) |
| F2 | 0.125 (2) | 0.192 (3) | 0.123 (2) | −0.109 (2) | 0.0860 (17) | −0.095 (2) |
| F3 | 0.166 (2) | 0.0741 (12) | 0.0727 (12) | 0.0422 (14) | −0.0214 (13) | −0.0284 (10) |
| F4 | 0.0973 (16) | 0.153 (2) | 0.0885 (14) | 0.0280 (15) | −0.0463 (12) | −0.0688 (15) |
| B1 | 0.0425 (11) | 0.0504 (12) | 0.0362 (10) | −0.0069 (9) | 0.0042 (8) | −0.0191 (9) |
| F1—B1 | 1.386 (3) | N5—C4 | 1.376 (3) |
| F2—B1 | 1.331 (4) | N1—H1 | 0.8600 |
| F3—B1 | 1.345 (4) | N2—H2A | 0.8600 |
| F4—B1 | 1.361 (3) | N2—H2B | 0.8600 |
| N1—C2 | 1.366 (3) | N4—H4B | 0.8600 |
| N1—C6 | 1.357 (3) | N4—H4A | 0.8600 |
| N2—C2 | 1.319 (3) | C6—C7 | 1.486 (4) |
| N3—C4 | 1.338 (3) | C7—H7B | 0.9600 |
| N3—C2 | 1.325 (3) | C7—H7C | 0.9600 |
| N4—C4 | 1.313 (3) | C7—H7A | 0.9600 |
| N5—C6 | 1.294 (3) | ||
| F1···N1 | 2.758 (2) | C2···F4i | 3.014 (4) |
| F1···C6i | 3.282 (3) | C2···N5iv | 3.339 (3) |
| F2···N2ii | 2.800 (4) | C2···C4iv | 3.561 (4) |
| F3···N4iii | 3.047 (3) | C2···C6iv | 3.591 (4) |
| F3···N4iv | 3.149 (3) | C4···N1iv | 3.353 (3) |
| F3···F3v | 3.000 (4) | C4···C2iv | 3.561 (4) |
| F4···C2i | 3.014 (4) | C6···F1i | 3.282 (3) |
| F4···N2vi | 2.877 (4) | C6···N3iv | 3.317 (3) |
| F4···N1i | 3.167 (4) | C6···C2iv | 3.591 (4) |
| F1···H7Ci | 2.7100 | C6···H4Bx | 3.0300 |
| F1···H1 | 1.9000 | B1···H1 | 2.9900 |
| F2···H2Aii | 2.0100 | H1···H2A | 2.2900 |
| F3···H4Aiv | 2.5900 | H1···H7B | 2.3700 |
| F3···H7Avii | 2.7200 | H1···B1 | 2.9900 |
| F3···H4Aiii | 2.3400 | H1···F1 | 1.9000 |
| F4···H2Bvi | 2.0200 | H2A···F2ii | 2.0100 |
| N1···F4i | 3.167 (4) | H2A···H1 | 2.2900 |
| N1···C4iv | 3.353 (3) | H2B···F4viii | 2.0200 |
| N1···F1 | 2.758 (2) | H4A···F3iv | 2.5900 |
| N2···F4viii | 2.877 (4) | H4A···F3ix | 2.3400 |
| N2···F2ii | 2.800 (4) | H4B···H7Ax | 2.5900 |
| N3···C6iv | 3.317 (3) | H4B···N5x | 2.1800 |
| N4···F3ix | 3.047 (3) | H4B···C6x | 3.0300 |
| N4···F3iv | 3.149 (3) | H7A···F3vii | 2.7200 |
| N4···N5x | 3.038 (3) | H7A···H4Bx | 2.5900 |
| N5···N4x | 3.038 (3) | H7B···H1 | 2.3700 |
| N5···C2iv | 3.339 (3) | H7C···F1i | 2.7100 |
| N5···H4Bx | 2.1800 | ||
| C2—N1—C6 | 119.77 (17) | N3—C4—N4 | 118.8 (2) |
| C2—N3—C4 | 116.00 (18) | N1—C6—C7 | 117.1 (2) |
| C4—N5—C6 | 115.89 (18) | N5—C6—C7 | 121.1 (2) |
| C6—N1—H1 | 120.00 | N1—C6—N5 | 121.9 (2) |
| C2—N1—H1 | 120.00 | C6—C7—H7A | 109.00 |
| C2—N2—H2A | 120.00 | C6—C7—H7B | 109.00 |
| H2A—N2—H2B | 120.00 | C6—C7—H7C | 109.00 |
| C2—N2—H2B | 120.00 | H7A—C7—H7B | 109.00 |
| H4A—N4—H4B | 120.00 | H7A—C7—H7C | 109.00 |
| C4—N4—H4B | 120.00 | H7B—C7—H7C | 109.00 |
| C4—N4—H4A | 120.00 | F1—B1—F2 | 110.0 (3) |
| N1—C2—N2 | 118.6 (2) | F1—B1—F3 | 109.8 (2) |
| N2—C2—N3 | 120.5 (2) | F1—B1—F4 | 107.9 (2) |
| N1—C2—N3 | 120.9 (2) | F2—B1—F3 | 111.7 (3) |
| N3—C4—N5 | 125.55 (19) | F2—B1—F4 | 109.6 (2) |
| N4—C4—N5 | 115.7 (2) | F3—B1—F4 | 107.8 (3) |
| C6—N1—C2—N2 | 179.3 (2) | C2—N3—C4—N4 | −178.4 (2) |
| C6—N1—C2—N3 | 0.4 (3) | C2—N3—C4—N5 | 2.8 (3) |
| C2—N1—C6—N5 | 0.6 (3) | C6—N5—C4—N3 | −1.9 (3) |
| C2—N1—C6—C7 | −178.4 (2) | C6—N5—C4—N4 | 179.3 (2) |
| C4—N3—C2—N1 | −2.0 (3) | C4—N5—C6—N1 | 0.1 (3) |
| C4—N3—C2—N2 | 179.1 (2) | C4—N5—C6—C7 | 179.0 (2) |
| H··· | ||||
| N1—H1···F1 | 0.86 | 1.90 | 2.758 (2) | 173 |
| N2—H2A···F2ii | 0.86 | 2.01 | 2.800 (4) | 152 |
| N2—H2B···F4viii | 0.86 | 2.02 | 2.877 (4) | 177 |
| N4—H4A···F3ix | 0.86 | 2.34 | 3.047 (3) | 139 |
| N4—H4B···N5x | 0.86 | 2.18 | 3.038 (3) | 178 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯F1 | 0.86 | 1.90 | 2.758 (2) | 173 |
| N2—H2 | 0.86 | 2.01 | 2.800 (4) | 152 |
| N2—H2 | 0.86 | 2.02 | 2.877 (4) | 177 |
| N4—H4 | 0.86 | 2.34 | 3.047 (3) | 139 |
| N4—H4 | 0.86 | 2.18 | 3.038 (3) | 178 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .