Literature DB >> 22052488

A review of methods used for identifying structural changes in a large protein complex.

Owen W Nadeau1, Gerald M Carlson.   

Abstract

This chapter explores the structural responses of a massive, hetero-oligomeric protein complex to a single allosteric activator as probed by a wide range of chemical, biochemical, and biophysical approaches. Some of the approaches used are amenable only to large protein targets, whereas others push the limits of their utility. Some of the techniques focus on individual subunits, or portions thereof, while others examine the complex as a whole. Despite the absence of crystallographic data for the complex, the diverse techniques identify and implicate a small region of its catalytic subunit as the master allosteric activation switch for the entire complex.

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Year:  2012        PMID: 22052488      PMCID: PMC3674763          DOI: 10.1007/978-1-61779-334-9_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  39 in total

1.  PURIFICATION AND PROPERTIES OF RABBIT SKELETAL MUSCLE PHOSPHORYLASE B KINASE.

Authors:  E G KREBS; D S LOVE; G E BRATVOLD; K A TRAYSER; W L MEYER; E H FISCHER
Journal:  Biochemistry       Date:  1964-08       Impact factor: 3.162

2.  The collaboratory for MS3D: a new cyberinfrastructure for the structural elucidation of biological macromolecules and their assemblies using mass spectrometry-based approaches.

Authors:  Eizadora T Yu; Arie Hawkins; Irwin D Kuntz; Larry A Rahn; Andrew Rothfuss; Kenneth Sale; Malin M Young; Christine L Yang; Carmen M Pancerella; Daniele Fabris
Journal:  J Proteome Res       Date:  2008-09-26       Impact factor: 4.466

3.  An epitope proximal to the carboxyl terminus of the alpha-subunit is located near the lobe tips of the phosphorylase kinase hexadecamer.

Authors:  D A Wilkinson; T N Marion; D M Tillman; M T Norcum; J F Hainfeld; J M Seyer; G M Carlson
Journal:  J Mol Biol       Date:  1994-01-21       Impact factor: 5.469

Review 4.  Insights into biomolecular function from small-angle scattering.

Authors:  J Trewhella
Journal:  Curr Opin Struct Biol       Date:  1997-10       Impact factor: 6.809

5.  Analyses of phosphorylase kinase by transmission and scanning transmission electron microscopy.

Authors:  M R Trempe; G M Carlson; J F Hainfeld; P S Furcinitti; J S Wall
Journal:  J Biol Chem       Date:  1986-02-25       Impact factor: 5.157

6.  A Ca(2+)-dependent global conformational change in the 3D structure of phosphorylase kinase obtained from electron microscopy.

Authors:  Owen W Nadeau; Gerald M Carlson; Edward P Gogol
Journal:  Structure       Date:  2002-01       Impact factor: 5.006

Review 7.  Phosphorylase kinase: the complexity of its regulation is reflected in the complexity of its structure.

Authors:  R J Brushia; D A Walsh
Journal:  Front Biosci       Date:  1999-09-15

8.  Activators of phosphorylase kinase alter the cross-linking of its catalytic subunit to the C-terminal one-sixth of its regulatory alpha subunit.

Authors:  O W Nadeau; K W Traxler; L R Fee; B A Baldwin; G M Carlson
Journal:  Biochemistry       Date:  1999-02-23       Impact factor: 3.162

9.  Ca2+-induced structural changes in phosphorylase kinase detected by small-angle X-ray scattering.

Authors:  Timothy S Priddy; Brian A MacDonald; William T Heller; Owen W Nadeau; Jill Trewhella; Gerald M Carlson
Journal:  Protein Sci       Date:  2005-03-01       Impact factor: 6.725

10.  Structural evidence for co-evolution of the regulation of contraction and energy production in skeletal muscle.

Authors:  Marina D Jeyasingham; Antonio Artigues; Owen W Nadeau; Gerald M Carlson
Journal:  J Mol Biol       Date:  2008-01-05       Impact factor: 5.469

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  3 in total

1.  Physicochemical changes in phosphorylase kinase induced by its cationic activator Mg(2+).

Authors:  Weiya Liu; Owen W Nadeau; Jessica Sage; Gerald M Carlson
Journal:  Protein Sci       Date:  2013-02-21       Impact factor: 6.725

2.  Sensing of Proteins by ICD Response of Iron(II) Clathrochelates Functionalized by Carboxyalkylsulfide Groups.

Authors:  Mykhaylo Losytskyy; Nina Chornenka; Serhii Vakarov; Samuel M Meier-Menches; Christopher Gerner; Slawomir Potocki; Vladimir B Arion; Elzbieta Gumienna-Kontecka; Yan Voloshin; Vladyslava Kovalska
Journal:  Biomolecules       Date:  2020-11-26

3.  Mass spectrometry reveals differences in stability and subunit interactions between activated and nonactivated conformers of the (αβγδ)4 phosphorylase kinase complex.

Authors:  Laura A Lane; Owen W Nadeau; Gerald M Carlson; Carol V Robinson
Journal:  Mol Cell Proteomics       Date:  2012-09-10       Impact factor: 5.911

  3 in total

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