Literature DB >> 15741333

Ca2+-induced structural changes in phosphorylase kinase detected by small-angle X-ray scattering.

Timothy S Priddy1, Brian A MacDonald, William T Heller, Owen W Nadeau, Jill Trewhella, Gerald M Carlson.   

Abstract

Phosphorylase kinase (PhK), a 1.3-MDa (alphabetagammadelta)(4) hexadecameric complex, is a Ca(2+)-dependent regulatory enzyme in the cascade activation of glycogenolysis. PhK comprises two arched (alphabetagammadelta)(2) octameric lobes that are oriented back-to-back with overall D(2) symmetry and joined by connecting bridges. From chemical cross-linking and electron microscopy, it is known that the binding of Ca(2+) by PhK perturbs the structure of all its subunits and promotes redistribution of density throughout both its lobes and bridges; however, little is known concerning the interrelationship of these effects. To measure structural changes induced by Ca(2+) in the PhK complex in solution, small-angle X-ray scattering was performed on nonactivated and Ca(2+)-activated PhK. Although the overall dimensions of the complex were not affected by Ca(2+), the cation did promote a shift in the distribution of the scattering density within the hydrated volume occupied by the PhK molecule, indicating a Ca(2+)-induced conformational change. Computer-generated models, based on elements of the known structure of PhK from electron microscopy, were constructed to aid in the interpretation of the scattering data. Models containing two ellipsoids and four cylinders to represent, respectively, the lobes and bridges of the PhK complex provided theoretical scattering profiles that accurately fit the experimental data. Structural differences between the models representing the nonactivated and Ca(2+)-activated conformers of PhK are consistent with Ca(2+)-induced conformational changes in both the lobes and the interlobal bridges.

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Year:  2005        PMID: 15741333      PMCID: PMC2253434          DOI: 10.1110/ps.041124705

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  34 in total

1.  Identification of the Ca2+-dependent modulator protein as the fourth subunit of rabbit skeletal muscle phosphorylase kinase.

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Review 2.  Molecular basis of signal integration in phosphorylase kinase.

Authors:  L M Heilmeyer
Journal:  Biochim Biophys Acta       Date:  1991-09-03

3.  An epitope proximal to the carboxyl terminus of the alpha-subunit is located near the lobe tips of the phosphorylase kinase hexadecamer.

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Journal:  J Mol Biol       Date:  1994-01-21       Impact factor: 5.469

Review 4.  Insights into biomolecular function from small-angle scattering.

Authors:  J Trewhella
Journal:  Curr Opin Struct Biol       Date:  1997-10       Impact factor: 6.809

5.  Domain interaction in rabbit muscle pyruvate kinase. II. Small angle neutron scattering and computer simulation.

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Journal:  J Biol Chem       Date:  1988-02-25       Impact factor: 5.157

6.  Comparison of the crystal and solution structures of calmodulin and troponin C.

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Journal:  Biochemistry       Date:  1988-02-09       Impact factor: 3.162

7.  The regulation of skeletal muscle phosphorylase kinase by Ca2+.

Authors:  C O Brostrom; F L Hunkeler; E G Krebs
Journal:  J Biol Chem       Date:  1971-04-10       Impact factor: 5.157

8.  A Ca(2+)-dependent global conformational change in the 3D structure of phosphorylase kinase obtained from electron microscopy.

Authors:  Owen W Nadeau; Gerald M Carlson; Edward P Gogol
Journal:  Structure       Date:  2002-01       Impact factor: 5.006

Review 9.  Phosphorylase kinase: the complexity of its regulation is reflected in the complexity of its structure.

Authors:  R J Brushia; D A Walsh
Journal:  Front Biosci       Date:  1999-09-15

10.  Activators of phosphorylase kinase alter the cross-linking of its catalytic subunit to the C-terminal one-sixth of its regulatory alpha subunit.

Authors:  O W Nadeau; K W Traxler; L R Fee; B A Baldwin; G M Carlson
Journal:  Biochemistry       Date:  1999-02-23       Impact factor: 3.162

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  15 in total

1.  Normal-mode flexible fitting of high-resolution structure of biological molecules toward one-dimensional low-resolution data.

Authors:  Christian Gorba; Osamu Miyashita; Florence Tama
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

2.  Probing the MgATP-bound conformation of the nitrogenase Fe protein by solution small-angle X-ray scattering.

Authors:  Ranjana Sarma; David W Mulder; Eric Brecht; Robert K Szilagyi; Lance C Seefeldt; Hiro Tsuruta; John W Peters
Journal:  Biochemistry       Date:  2007-11-15       Impact factor: 3.162

3.  New sources and instrumentation for neutrons in biology.

Authors:  S C M Teixeira; J Ankner; M C Bellissent-Funel; R Bewley; M P Blakeley; L Coates; R Dahint; R Dalgliesh; N Dencher; J Dhont; P Fischer; V T Forsyth; G Fragneto; B Frick; T Geue; R Gilles; T Gutberlet; M Haertlein; T Hauß; W Häußler; W T Heller; K Herwig; O Holderer; F Juranyi; R Kampmann; R Knott; J Kohlbrecher; S Kreuger; P Langan; R Lechner; G Lynn; C Majkrzak; R May; F Meilleur; Y Mo; K Mortensen; D A A Myles; F Natali; C Neylon; N Niimura; J Ollivier; A Ostermann; J Peters; J Pieper; A Rühm; D Schwahn; K Shibata; A K Soper; T Straessle; U-I Suzuki; I Tanaka; M Tehei; P Timmins; N Torikai; T Unruh; V Urban; R Vavrin; K Weiss; G Zaccai
Journal:  Chem Phys       Date:  2008       Impact factor: 2.348

Review 4.  A review of methods used for identifying structural changes in a large protein complex.

Authors:  Owen W Nadeau; Gerald M Carlson
Journal:  Methods Mol Biol       Date:  2012

5.  Electrostatic changes in phosphorylase kinase induced by its obligatory allosteric activator Ca2+.

Authors:  Timothy S Priddy; C Russell Middaugh; Gerald M Carlson
Journal:  Protein Sci       Date:  2007-03       Impact factor: 6.725

6.  Cryoelectron microscopy reveals new features in the three-dimensional structure of phosphorylase kinase.

Authors:  Owen W Nadeau; Edward P Gogol; Gerald M Carlson
Journal:  Protein Sci       Date:  2005-03-01       Impact factor: 6.725

7.  Structure and location of the regulatory β subunits in the (αβγδ)4 phosphorylase kinase complex.

Authors:  Owen W Nadeau; Laura A Lane; Dong Xu; Jessica Sage; Timothy S Priddy; Antonio Artigues; Maria T Villar; Qing Yang; Carol V Robinson; Yang Zhang; Gerald M Carlson
Journal:  J Biol Chem       Date:  2012-09-11       Impact factor: 5.157

8.  Physicochemical changes in phosphorylase kinase induced by its cationic activator Mg(2+).

Authors:  Weiya Liu; Owen W Nadeau; Jessica Sage; Gerald M Carlson
Journal:  Protein Sci       Date:  2013-02-21       Impact factor: 6.725

9.  Physicochemical changes in phosphorylase kinase associated with its activation.

Authors:  Weiya Liu; Timothy S Priddy; Gerald M Carlson
Journal:  Protein Sci       Date:  2008-09-15       Impact factor: 6.725

10.  Activation of Phosphorylase Kinase by Physiological Temperature.

Authors:  Julio E Herrera; Jackie A Thompson; Mary Ashley Rimmer; Owen W Nadeau; Gerald M Carlson
Journal:  Biochemistry       Date:  2015-12-14       Impact factor: 3.162

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