Literature DB >> 22048944

Enzyme-sharing as a cause of multi-stationarity in signalling systems.

Elisenda Feliu1, Carsten Wiuf.   

Abstract

Multi-stationarity in biological systems is a mechanism of cellular decision-making. In particular, signalling pathways regulated by protein phosphorylation display features that facilitate a variety of responses to different biological inputs. The features that lead to multi-stationarity are of particular interest to determine, as well as the stability, properties of the steady states. In this paper, we determine conditions for the emergence of multi-stationarity in small motifs without feedback that repeatedly occur in signalling pathways. We derive an explicit mathematical relationship ϕ between the concentration of a chemical species at steady state and a conserved quantity of the system such as the total amount of substrate available. We show that ϕ determines the number of steady states and provides a necessary condition for a steady state to be stable-that is, to be biologically attainable. Further, we identify characteristics of the motifs that lead to multi-stationarity, and extend the view that multi-stationarity in signalling pathways arises from multi-site phosphorylation. Our approach relies on mass-action kinetics, and the conclusions are drawn in full generality without resorting to simulations or random generation of parameters. The approach is extensible to other systems.

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Year:  2011        PMID: 22048944      PMCID: PMC3350728          DOI: 10.1098/rsif.2011.0664

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  28 in total

Review 1.  The regulation of protein function by multisite phosphorylation--a 25 year update.

Authors:  P Cohen
Journal:  Trends Biochem Sci       Date:  2000-12       Impact factor: 13.807

Review 2.  The protein kinase complement of the human genome.

Authors:  G Manning; D B Whyte; R Martinez; T Hunter; S Sudarsanam
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3.  Mechanistic studies of the dual phosphorylation of mitogen-activated protein kinase.

Authors:  J E Ferrell; R R Bhatt
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Review 4.  The MEK/ERK cascade: from signaling specificity to diverse functions.

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5.  Multistationarity in the activation of a MAPK: parametrizing the relevant region in parameter space.

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Journal:  Math Biosci       Date:  2007-10-26       Impact factor: 2.144

6.  An amplified sensitivity arising from covalent modification in biological systems.

Authors:  A Goldbeter; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

7.  Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

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Review 8.  The structure and regulation of protein phosphatases.

Authors:  P Cohen
Journal:  Annu Rev Biochem       Date:  1989       Impact factor: 23.643

9.  Unlimited multistability in multisite phosphorylation systems.

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10.  Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades.

Authors:  Nick I Markevich; Jan B Hoek; Boris N Kholodenko
Journal:  J Cell Biol       Date:  2004-01-26       Impact factor: 10.539

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  18 in total

1.  Simplifying biochemical models with intermediate species.

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3.  Regions of multistationarity in cascades of Goldbeter-Koshland loops.

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4.  Exploring the intrinsic behaviour of multisite phosphorylation systems as part of signalling pathways.

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Journal:  J R Soc Interface       Date:  2018-06       Impact factor: 4.118

5.  Cellular compartments cause multistability and allow cells to process more information.

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6.  Implicit dose-response curves.

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Journal:  J Math Biol       Date:  2014-07-10       Impact factor: 2.259

7.  Catalytic constants enable the emergence of bistability in dual phosphorylation.

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Journal:  J R Soc Interface       Date:  2014-03-19       Impact factor: 4.118

8.  A hidden integral structure endows absolute concentration robust systems with resilience to dynamical concentration disturbances.

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Journal:  J R Soc Interface       Date:  2020-10-28       Impact factor: 4.118

Review 9.  Dynamics of Posttranslational Modification Systems: Recent Progress and Future Directions.

Authors:  Carsten Conradi; Anne Shiu
Journal:  Biophys J       Date:  2018-02-06       Impact factor: 4.033

10.  Sharing of Phosphatases Promotes Response Plasticity in Phosphorylation Cascades.

Authors:  Bhaswar Ghosh; Uddipan Sarma; Victor Sourjik; Stefan Legewie
Journal:  Biophys J       Date:  2018-01-09       Impact factor: 4.033

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