Literature DB >> 22047352

Automated temporal tracking and segmentation of lymphoma on serial CT examinations.

Jiajing Xu1, Hayit Greenspan, Sandy Napel, Daniel L Rubin.   

Abstract

PURPOSE: It is challenging to reproducibly measure and compare cancer lesions on numerous follow-up studies; the process is time-consuming and error-prone. In this paper, we show a method to automatically and reproducibly identify and segment abnormal lymph nodes in serial computed tomography (CT) exams.
METHODS: Our method leverages initial identification of enlarged (abnormal) lymph nodes in the baseline scan. We then identify an approximate region for the node in the follow-up scans using nonrigid image registration. The baseline scan is also used to locate regions of normal, non-nodal tissue surrounding the lymph node and to map them onto the follow-up scans, in order to reduce the search space to locate the lymph node on the follow-up scans. Adaptive region-growing and clustering algorithms are then used to obtain the final contours for segmentation. We applied our method to 24 distinct enlarged lymph nodes at multiple time points from 14 patients. The scan at the earlier time point was used as the baseline scan to be used in evaluating the follow-up scan, resulting in 70 total test cases (e.g., a series of scans obtained at 4 time points results in 3 test cases). For each of the 70 cases, a "reference standard" was obtained by manual segmentation by a radiologist. Assessment according to response evaluation criteria in solid tumors (RECIST) using our method agreed with RECIST assessments made using the reference standard segmentations in all test cases, and by calculating node overlap ratio and Hausdorff distance between the computer and radiologist-generated contours.
RESULTS: Compared to the reference standard, our method made the correct RECIST assessment for all 70 cases. The average overlap ratio was 80.7 ± 9.7% s.d., and the average Hausdorff distance was 3.2 ± 1.8 mm s.d. The concordance correlation between automated and manual segmentations was 0.978 (95% confidence interval 0.962, 0.984). The 100% agreement in our sample between our method and the standard with regard to RECIST classification suggests that the true disagreement rate is no more than 6%.
CONCLUSIONS: Our automated lymph node segmentation method achieves excellent overall segmentation performance and provides equivalent RECIST assessment. It potentially will be useful to streamline and improve cancer lesion measurement and tracking and to improve assessment of cancer treatment response.

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Year:  2011        PMID: 22047352      PMCID: PMC3210189          DOI: 10.1118/1.3643027

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  19 in total

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Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
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2.  Lung cancer: computerized quantification of tumor response--initial results.

Authors:  Binsheng Zhao; Lawrence H Schwartz; Chaya S Moskowitz; Michelle S Ginsberg; Naiyer A Rizvi; Mark G Kris
Journal:  Radiology       Date:  2006-12       Impact factor: 11.105

3.  Automated matching and segmentation of lymphoma on serial CT examinations.

Authors:  Jiayong Yan; Binsheng Zhao; Sean Curran; Andrew Zelenetz; Lawrence H Schwartz
Journal:  Med Phys       Date:  2007-01       Impact factor: 4.071

4.  Marker-controlled watershed for lymphoma segmentation in sequential CT images.

Authors:  Jiayong Yan; Binsheng Zhao; Liang Wang; Andrew Zelenetz; Lawrence H Schwartz
Journal:  Med Phys       Date:  2006-07       Impact factor: 4.071

5.  A concordance correlation coefficient to evaluate reproducibility.

Authors:  L I Lin
Journal:  Biometrics       Date:  1989-03       Impact factor: 2.571

6.  Statistical methods for assessing agreement between two methods of clinical measurement.

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Journal:  Lancet       Date:  1986-02-08       Impact factor: 79.321

7.  A methodology for evaluation of boundary detection algorithms on medical images.

Authors:  V Chalana; Y Kim
Journal:  IEEE Trans Med Imaging       Date:  1997-10       Impact factor: 10.048

8.  Similarity evaluation in a content-based image retrieval (CBIR) CADx system for characterization of breast masses on ultrasound images.

Authors:  Hyun-Chong Cho; Lubomir Hadjiiski; Berkman Sahiner; Heang-Ping Chan; Mark Helvie; Chintana Paramagul; Alexis V Nees
Journal:  Med Phys       Date:  2011-04       Impact factor: 4.071

Review 9.  Current concepts in the mediastinal lymph node staging of nonsmall cell lung cancer.

Authors:  Henk Kramer; Harry J M Groen
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10.  Frictional contact mechanics methods for soft materials: application to tracking breast cancers.

Authors:  Jae-Hoon Chung; Vijay Rajagopal; Tod A Laursen; Poul M F Nielsen; Martyn P Nash
Journal:  J Biomech       Date:  2007-08-28       Impact factor: 2.712

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  7 in total

1.  Automated method for detection and segmentation of liver metastatic lesions in follow-up CT examinations.

Authors:  Avi Ben-Cohen; Eyal Klang; Idit Diamant; Noa Rozendorn; Michal Marianne Amitai; Hayit Greenspan
Journal:  J Med Imaging (Bellingham)       Date:  2015-08-19

2.  Tracking Metastatic Brain Tumors in Longitudinal Scans via Joint Image Registration and Labeling.

Authors:  Nicha Chitphakdithai; Veronica L Chiang; James S Duncan
Journal:  Spatiotemporal Image Anal Longitud Time Ser Image Data (2012)       Date:  2012-10

3.  Semiautomatic segmentation and follow-up of multicomponent low-grade tumors in longitudinal brain MRI studies.

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Review 4.  Imaging genomics in cancer research: limitations and promises.

Authors:  Harrison X Bai; Ashley M Lee; Li Yang; Paul Zhang; Christos Davatzikos; John M Maris; Sharon J Diskin
Journal:  Br J Radiol       Date:  2016-02-11       Impact factor: 3.039

5.  Automated tracking of quantitative assessments of tumor burden in clinical trials.

Authors:  Daniel L Rubin; Debra Willrett; Martin J O'Connor; Cleber Hage; Camille Kurtz; Dilvan A Moreira
Journal:  Transl Oncol       Date:  2014-02-01       Impact factor: 4.243

6.  Mediastinal lymph node detection and station mapping on chest CT using spatial priors and random forest.

Authors:  Jiamin Liu; Joanne Hoffman; Jocelyn Zhao; Jianhua Yao; Le Lu; Lauren Kim; Evrim B Turkbey; Ronald M Summers
Journal:  Med Phys       Date:  2016-07       Impact factor: 4.071

7.  Snake model-based lymphoma segmentation for sequential CT images.

Authors:  Qiang Chen; Fang Quan; Jiajing Xu; Daniel L Rubin
Journal:  Comput Methods Programs Biomed       Date:  2013-06-17       Impact factor: 5.428

  7 in total

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