Literature DB >> 24784396

Semiautomatic segmentation and follow-up of multicomponent low-grade tumors in longitudinal brain MRI studies.

Lior Weizman1, Liat Ben Sira2, Leo Joskowicz3, Daniel L Rubin4, Kristen W Yeom4, Shlomi Constantini5, Ben Shofty5, Dafna Ben Bashat6.   

Abstract

PURPOSE: Tracking the progression of low grade tumors (LGTs) is a challenging task, due to their slow growth rate and associated complex internal tumor components, such as heterogeneous enhancement, hemorrhage, and cysts. In this paper, the authors show a semiautomatic method to reliably track the volume of LGTs and the evolution of their internal components in longitudinal MRI scans.
METHODS: The authors' method utilizes a spatiotemporal evolution modeling of the tumor and its internal components. Tumor components gray level parameters are estimated from the follow-up scan itself, obviating temporal normalization of gray levels. The tumor delineation procedure effectively incorporates internal classification of the baseline scan in the time-series as prior data to segment and classify a series of follow-up scans. The authors applied their method to 40 MRI scans of ten patients, acquired at two different institutions. Two types of LGTs were included: Optic pathway gliomas and thalamic astrocytomas. For each scan, a "gold standard" was obtained manually by experienced radiologists. The method is evaluated versus the gold standard with three measures: gross total volume error, total surface distance, and reliability of tracking tumor components evolution.
RESULTS: Compared to the gold standard the authors' method exhibits a mean Dice similarity volumetric measure of 86.58% and a mean surface distance error of 0.25 mm. In terms of its reliability in tracking the evolution of the internal components, the method exhibits strong positive correlation with the gold standard.
CONCLUSIONS: The authors' method provides accurate and repeatable delineation of the tumor and its internal components, which is essential for therapy assessment of LGTs. Reliable tracking of internal tumor components over time is novel and potentially will be useful to streamline and improve follow-up of brain tumors, with indolent growth and behavior.

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Year:  2014        PMID: 24784396      PMCID: PMC4000396          DOI: 10.1118/1.4871040

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  36 in total

1.  The dilemma of low grade glioma.

Authors:  I R Whittle
Journal:  J Neurol Neurosurg Psychiatry       Date:  2004-06       Impact factor: 10.154

2.  Automatic segmentation and components classification of optic pathway gliomas in MRI.

Authors:  Lior Weizman; Liat Ben-Sira; Leo Joskowicz; Ronit Precel; Shlomi Constantini; Dafna Ben-Bashat
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

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Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2006

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Journal:  IEEE Trans Med Imaging       Date:  2009-07-14       Impact factor: 10.048

5.  Automatic segmentation, internal classification, and follow-up of optic pathway gliomas in MRI.

Authors:  L Weizman; L Ben Sira; L Joskowicz; S Constantini; R Precel; B Shofty; D Ben Bashat
Journal:  Med Image Anal       Date:  2011-07-21       Impact factor: 8.545

6.  MRI internal segmentation of optic pathway gliomas: clinical implementation of a novel algorithm.

Authors:  Ben Shofty; Lior Weizman; Leo Joskowicz; Shlomi Constantini; Anat Kesler; Dafna Ben-Bashat; Michal Yalon; Rina Dvir; Sigal Freedman; Jonathan Roth; Liat Ben-Sira
Journal:  Childs Nerv Syst       Date:  2011-03-31       Impact factor: 1.475

7.  Differential MRI analysis for quantification of low grade glioma growth.

Authors:  Elsa D Angelini; Julie Delon; Alpha Boubacar Bah; Laurent Capelle; Emmanuel Mandonnet
Journal:  Med Image Anal       Date:  2011-06-06       Impact factor: 8.545

8.  Brain MRI tissue classification based on local Markov random fields.

Authors:  Jussi Tohka; Ivo D Dinov; David W Shattuck; Arthur W Toga
Journal:  Magn Reson Imaging       Date:  2010-01-27       Impact factor: 2.546

9.  Segmentation of the left ventricle from cardiac MR images using a subject-specific dynamical model.

Authors:  Yun Zhu; Xenophon Papademetris; Albert J Sinusas; James S Duncan
Journal:  IEEE Trans Med Imaging       Date:  2009-09-29       Impact factor: 10.048

10.  A brain tumor segmentation framework based on outlier detection.

Authors:  Marcel Prastawa; Elizabeth Bullitt; Sean Ho; Guido Gerig
Journal:  Med Image Anal       Date:  2004-09       Impact factor: 8.545

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  9 in total

1.  Patterns of relapse and growth kinetics of surgery- and radiation-refractory meningiomas.

Authors:  Matthieu Peyre; Marc Zanello; Karima Mokhtari; Anne-Laure Boch; Laurent Capelle; Alexandre Carpentier; Stephane Clemenceau; Carine Karachi; Soledad Navarro; Aurelien Nouet; Vincent Reina; Charles-Ambroise Valery; Marc Sanson; Philippe Cornu; Michel Kalamarides
Journal:  J Neurooncol       Date:  2015-04-17       Impact factor: 4.130

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Journal:  Int J Comput Assist Radiol Surg       Date:  2017-10-14       Impact factor: 2.924

3.  Surveillance magnetic resonance imaging for isolated optic pathway gliomas: is gadolinium necessary?

Authors:  Ezekiel Maloney; A Luana Stanescu; Francisco A Perez; Ramesh S Iyer; Randolph K Otto; Sarah Leary; Lotte Steuten; Amanda I Phipps; Dennis W W Shaw
Journal:  Pediatr Radiol       Date:  2018-05-22

4.  Intra-rater variability in low-grade glioma segmentation.

Authors:  Hans Kristian Bø; Ole Solheim; Asgeir Store Jakola; Kjell-Arne Kvistad; Ingerid Reinertsen; Erik Magnus Berntsen
Journal:  J Neurooncol       Date:  2016-11-11       Impact factor: 4.130

5.  Interval brain imaging for adults with cerebral glioma.

Authors:  Gerard Thompson; Theresa A Lawrie; Ashleigh Kernohan; Michael D Jenkinson
Journal:  Cochrane Database Syst Rev       Date:  2019-12-24

6.  Divide and Conquer: Stratifying Training Data by Tumor Grade Improves Deep Learning-Based Brain Tumor Segmentation.

Authors:  Michael Rebsamen; Urspeter Knecht; Mauricio Reyes; Roland Wiest; Raphael Meier; Richard McKinley
Journal:  Front Neurosci       Date:  2019-11-05       Impact factor: 4.677

7.  Development and Validation of a Deep Learning Model for Brain Tumor Diagnosis and Classification Using Magnetic Resonance Imaging.

Authors:  Peiyi Gao; Wei Shan; Yue Guo; Yinyan Wang; Rujing Sun; Jinxiu Cai; Hao Li; Wei Sheng Chan; Pan Liu; Lei Yi; Shaosen Zhang; Weihua Li; Tao Jiang; Kunlun He; Zhenzhou Wu
Journal:  JAMA Netw Open       Date:  2022-08-01

8.  Clinical Evaluation of a Fully-automatic Segmentation Method for Longitudinal Brain Tumor Volumetry.

Authors:  Raphael Meier; Urspeter Knecht; Tina Loosli; Stefan Bauer; Johannes Slotboom; Roland Wiest; Mauricio Reyes
Journal:  Sci Rep       Date:  2016-03-22       Impact factor: 4.379

9.  Expertise Affects Inter-Observer Agreement at Peripheral Locations within a Brain Tumor.

Authors:  Emily M Crowe; William Alderson; Jonathan Rossiter; Christopher Kent
Journal:  Front Psychol       Date:  2017-09-20
  9 in total

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