Literature DB >> 22029422

Proteomics techniques for the development of flood tolerant crops.

Setsuko Komatsu1, Susumu Hiraga, Yuki Yanagawa.   

Abstract

Proteomics is a useful analytical approach for investigating crop responses to stress. Recent remarkable advances in proteomic techniques allow for the identification of a wider range of proteins than was previously possible. The application of proteomic techniques to clarify the molecular mechanisms underlying crop responses to flooding stress may facilitate the development of flood tolerant crops. Flooding is an environmental stress found worldwide and may increase in frequency due to changes in global climate. Waterlogging resulting from flooding causes significant reductions in the growth and yield of several crops. Transient flooding displaces gases in soil pores and often causes hypoxia in plants grown on land with poor drainage. Changes in protein expression and post-translational modification of proteins occur as plants activate their defense system in response to flooding stress. In this review, we discuss the contributions that proteomic studies have made toward increasing our understanding of the well-organized cellular response to flooding in soybean and other crops. The biological relevance of the proteins identified using proteomic techniques in regard to crop stress tolerance will be discussed as well.

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Year:  2011        PMID: 22029422     DOI: 10.1021/pr2008863

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  27 in total

1.  Analysis of flooding-responsive proteins localized in the nucleus of soybean root tips.

Authors:  Setsuko Komatsu; Susumu Hiraga; Mohammad Zaman Nouri
Journal:  Mol Biol Rep       Date:  2014-01-03       Impact factor: 2.316

2.  Characterization of ascorbate peroxidase in soybean under flooding and drought stresses.

Authors:  Rehana Kausar; Zahed Hossain; Takahiro Makino; Setsuko Komatsu
Journal:  Mol Biol Rep       Date:  2012-10-07       Impact factor: 2.316

3.  Analysis of response mechanism in soybean under low oxygen and flooding stresses using gel-base proteomics technique.

Authors:  Amana Khatoon; Shafiq Rehman; Myeong-Won Oh; Sun-Hee Woo; Setsuko Komatsu
Journal:  Mol Biol Rep       Date:  2012-10-07       Impact factor: 2.316

4.  Metabolic profiles of flooding-tolerant mechanism in early-stage soybean responding to initial stress.

Authors:  Xin Wang; Wei Zhu; Akiko Hashiguchi; Minoru Nishimura; Jingkui Tian; Setsuko Komatsu
Journal:  Plant Mol Biol       Date:  2017-07-21       Impact factor: 4.076

Review 5.  Insights to proteomics and metabolomics metal chelation in food crops.

Authors:  Osikemekha Anthony Anani; Inobeme Abel; John Ovie Olomukoro; Ikenna Benedict Onyeachu
Journal:  J Proteins Proteom       Date:  2022-06-20

6.  Proteomic and biochemical analyses of the cotyledon and root of flooding-stressed soybean plants.

Authors:  Setsuko Komatsu; Takahiro Makino; Hiroshi Yasue
Journal:  PLoS One       Date:  2013-06-14       Impact factor: 3.240

7.  Soybean Proteome Database 2012: update on the comprehensive data repository for soybean proteomics.

Authors:  Hajime Ohyanagi; Katsumi Sakata; Setsuko Komatsu
Journal:  Front Plant Sci       Date:  2012-05-30       Impact factor: 5.753

8.  Examination of the leaf proteome during flooding stress and the induction of programmed cell death in maize.

Authors:  Yu Chen; Xi Chen; Hongjuan Wang; Yiqun Bao; Wei Zhang
Journal:  Proteome Sci       Date:  2014-06-11       Impact factor: 2.480

9.  Cell wall proteomics of crops.

Authors:  Setsuko Komatsu; Yuki Yanagawa
Journal:  Front Plant Sci       Date:  2013-02-07       Impact factor: 5.753

Review 10.  Abiotic stress responses in plant roots: a proteomics perspective.

Authors:  Dipanjana Ghosh; Jian Xu
Journal:  Front Plant Sci       Date:  2014-01-24       Impact factor: 5.753

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