Literature DB >> 22016057

The N-end rule pathway: emerging functions and molecular principles of substrate recognition.

Shashikanth M Sriram1, Bo Yeon Kim, Yong Tae Kwon.   

Abstract

The N-end rule defines the protein-destabilizing activity of a given amino-terminal residue and its post-translational modification. Since its discovery 25 years ago, the pathway involved in the N-end rule has been thought to target only a limited set of specific substrates of the ubiquitin-proteasome system. Recent studies have provided insights into the components, substrates, functions and structural basis of substrate recognition. The N-end rule pathway is now emerging as a major cellular proteolytic system, in which the majority of proteins are born with or acquire specific N-terminal degradation determinants through protein-specific or global post-translational modifications.

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Year:  2011        PMID: 22016057     DOI: 10.1038/nrm3217

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  130 in total

1.  A novel ubiquitination factor, E4, is involved in multiubiquitin chain assembly.

Authors:  M Koegl; T Hoppe; S Schlenker; H D Ulrich; T U Mayer; S Jentsch
Journal:  Cell       Date:  1999-03-05       Impact factor: 41.582

2.  Acetylation of Protein N-terminal amino groups structural observations on alpha-amino acetylated proteins.

Authors:  H Jörnvall
Journal:  J Theor Biol       Date:  1975-11       Impact factor: 2.691

3.  Gamma 2 subunit of G protein heterotrimer is an N-end rule ubiquitylation substrate.

Authors:  Maria H Hamilton; Lana A Cook; Theodore R McRackan; Kevin L Schey; John D Hildebrandt
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-16       Impact factor: 11.205

4.  Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications.

Authors:  Jean-Benoît Peltier; Daniel R Ripoll; Giulia Friso; Andrea Rudella; Yang Cai; Jimmy Ytterberg; Lisa Giacomelli; Jaroslaw Pillardy; Klaas J van Wijk
Journal:  J Biol Chem       Date:  2003-10-30       Impact factor: 5.157

5.  A SOLUBLE AMINO ACID-INCORPORATING SYSTEM FROM RAT LIVER.

Authors:  H KAJI; G D NOVELLI; A KAJI
Journal:  Biochim Biophys Acta       Date:  1963-11-22

6.  Partners in crime: ubiquitin-mediated degradation and autophagy.

Authors:  Shashikanth M Sriram; Dong Hoon Han; Sung Tae Kim
Journal:  Sci Signal       Date:  2011-06-21       Impact factor: 8.192

7.  Altered activity, social behavior, and spatial memory in mice lacking the NTAN1p amidase and the asparagine branch of the N-end rule pathway.

Authors:  Y T Kwon; S A Balogh; I V Davydov; A S Kashina; J K Yoon; Y Xie; A Gaur; L Hyde; V H Denenberg; A Varshavsky
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

8.  Universality and structure of the N-end rule.

Authors:  D K Gonda; A Bachmair; I Wünning; J W Tobias; W S Lane; A Varshavsky
Journal:  J Biol Chem       Date:  1989-10-05       Impact factor: 5.157

9.  Vascular normalization in Rgs5-deficient tumours promotes immune destruction.

Authors:  Juliana Hamzah; Manfred Jugold; Fabian Kiessling; Paul Rigby; Mitali Manzur; Hugo H Marti; Tamer Rabie; Sylvia Kaden; Hermann-Josef Gröne; Günter J Hämmerling; Bernd Arnold; Ruth Ganss
Journal:  Nature       Date:  2008-04-16       Impact factor: 49.962

10.  A recognition component of the ubiquitin system is required for peptide transport in Saccharomyces cerevisiae.

Authors:  K Alagramam; F Naider; J M Becker
Journal:  Mol Microbiol       Date:  1995-01       Impact factor: 3.501

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  81 in total

1.  Plant cell biology: sensing oxygen.

Authors:  Kim Baumann
Journal:  Nat Rev Mol Cell Biol       Date:  2011-11-23       Impact factor: 94.444

2.  Characterization of arginylation branch of N-end rule pathway in G-protein-mediated proliferation and signaling of cardiomyocytes.

Authors:  Min Jae Lee; Dong Eun Kim; Adriana Zakrzewska; Young Dong Yoo; Su-Hyeon Kim; Sung Tae Kim; Jai Wha Seo; Young Sook Lee; Gerald W Dorn; Uhtaek Oh; Bo Yeon Kim; Yong Tae Kwon
Journal:  J Biol Chem       Date:  2012-05-10       Impact factor: 5.157

3.  Endoproteolytic cleavage of TUG protein regulates GLUT4 glucose transporter translocation.

Authors:  Jonathan S Bogan; Bradley R Rubin; Chenfei Yu; Michael G Löffler; Charisse M Orme; Jonathan P Belman; Leah J McNally; Mingming Hao; James A Cresswell
Journal:  J Biol Chem       Date:  2012-05-18       Impact factor: 5.157

4.  Structure and conservation of the periplasmic targeting factor Tic22 protein from plants and cyanobacteria.

Authors:  Joanna Tripp; Alexander Hahn; Patrick Koenig; Nadine Flinner; Daniela Bublak; Eva M Brouwer; Franziska Ertel; Oliver Mirus; Irmgard Sinning; Ivo Tews; Enrico Schleiff
Journal:  J Biol Chem       Date:  2012-05-16       Impact factor: 5.157

5.  UBR box N-recognin-4 (UBR4), an N-recognin of the N-end rule pathway, and its role in yolk sac vascular development and autophagy.

Authors:  Takafumi Tasaki; Sung Tae Kim; Adriana Zakrzewska; Bo Eun Lee; Min Jueng Kang; Young Dong Yoo; Hyun Joo Cha-Molstad; Joonsung Hwang; Nak Kyun Soung; Ki Sa Sung; Su-Hyeon Kim; Minh Dang Nguyen; Ming Sun; Eugene C Yi; Bo Yeon Kim; Yong Tae Kwon
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

6.  Conditional Proteolysis of the Membrane Protein YfgM by the FtsH Protease Depends on a Novel N-terminal Degron.

Authors:  Lisa-Marie Bittner; Kai Westphal; Franz Narberhaus
Journal:  J Biol Chem       Date:  2015-06-19       Impact factor: 5.157

Review 7.  Molecular definitions of autophagy and related processes.

Authors:  Lorenzo Galluzzi; Eric H Baehrecke; Andrea Ballabio; Patricia Boya; José Manuel Bravo-San Pedro; Francesco Cecconi; Augustine M Choi; Charleen T Chu; Patrice Codogno; Maria Isabel Colombo; Ana Maria Cuervo; Jayanta Debnath; Vojo Deretic; Ivan Dikic; Eeva-Liisa Eskelinen; Gian Maria Fimia; Simone Fulda; David A Gewirtz; Douglas R Green; Malene Hansen; J Wade Harper; Marja Jäättelä; Terje Johansen; Gabor Juhasz; Alec C Kimmelman; Claudine Kraft; Nicholas T Ktistakis; Sharad Kumar; Beth Levine; Carlos Lopez-Otin; Frank Madeo; Sascha Martens; Jennifer Martinez; Alicia Melendez; Noboru Mizushima; Christian Münz; Leon O Murphy; Josef M Penninger; Mauro Piacentini; Fulvio Reggiori; David C Rubinsztein; Kevin M Ryan; Laura Santambrogio; Luca Scorrano; Anna Katharina Simon; Hans-Uwe Simon; Anne Simonsen; Nektarios Tavernarakis; Sharon A Tooze; Tamotsu Yoshimori; Junying Yuan; Zhenyu Yue; Qing Zhong; Guido Kroemer
Journal:  EMBO J       Date:  2017-06-08       Impact factor: 11.598

Review 8.  Redox Signaling by Reactive Electrophiles and Oxidants.

Authors:  Saba Parvez; Marcus J C Long; Jesse R Poganik; Yimon Aye
Journal:  Chem Rev       Date:  2018-08-27       Impact factor: 60.622

9.  The arginylation branch of the N-end rule pathway positively regulates cellular autophagic flux and clearance of proteotoxic proteins.

Authors:  Yanxialei Jiang; Jeeyoung Lee; Jung Hoon Lee; Joon Won Lee; Ji Hyeon Kim; Won Hoon Choi; Young Dong Yoo; Hyunjoo Cha-Molstad; Bo Yeon Kim; Yong Tae Kwon; Sue Ah Noh; Kwang Pyo Kim; Min Jae Lee
Journal:  Autophagy       Date:  2016-08-25       Impact factor: 16.016

Review 10.  Aberrant protein s-nitrosylation in neurodegenerative diseases.

Authors:  Tomohiro Nakamura; Shichun Tu; Mohd Waseem Akhtar; Carmen R Sunico; Shu-Ichi Okamoto; Stuart A Lipton
Journal:  Neuron       Date:  2013-05-22       Impact factor: 17.173

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