Literature DB >> 22006344

Protein engineering towards natural product synthesis and diversification.

Angelica O Zabala1, Ralph A Cacho, Yi Tang.   

Abstract

A dazzling array of enzymes is used by nature in making structurally complex natural products. These enzymes constitute a molecular toolbox that may be used in the construction and fine-tuning of pharmaceutically active molecules. Aided by technological advancements in protein engineering, it is now possible to tailor the activities and specificities of these enzymes as biocatalysts in the production of both natural products and their unnatural derivatives. These efforts are crucial in drug discovery and development, where there is a continuous quest for more potent agents. Both rational and random evolution techniques have been utilized in engineering these enzymes. This review will highlight some examples from several large families of natural products.

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Year:  2011        PMID: 22006344      PMCID: PMC3905082          DOI: 10.1007/s10295-011-1044-2

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  103 in total

1.  Bornyl diphosphate synthase: structure and strategy for carbocation manipulation by a terpenoid cyclase.

Authors:  Douglas A Whittington; Mitchell L Wise; Marek Urbansky; Robert M Coates; Rodney B Croteau; David W Christianson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-13       Impact factor: 11.205

Review 2.  Modification of post-PKS tailoring steps through combinatorial biosynthesis.

Authors:  Uwe Rix; Carsten Fischer; Lily L Remsing; Jürgen Rohr
Journal:  Nat Prod Rep       Date:  2002-10       Impact factor: 13.423

3.  Insights into bacterial 6-methylsalicylic acid synthase and its engineering to orsellinic acid synthase for spirotetronate generation.

Authors:  Wei Ding; Chun Lei; Qingli He; Qinglin Zhang; Yurong Bi; Wen Liu
Journal:  Chem Biol       Date:  2010-05-28

4.  Directed evolution experiments reveal mutations at cycloartenol synthase residue His477 that dramatically alter catalysis.

Authors:  Michael J R Segura; Silvia Lodeiro; Michelle M Meyer; Akash J Patel; Seiichi P T Matsuda
Journal:  Org Lett       Date:  2002-12-12       Impact factor: 6.005

Review 5.  Trends for diverse production strategies of plant medicinal alkaloids.

Authors:  Liuqing Yang; Joachim Stöckigt
Journal:  Nat Prod Rep       Date:  2010-08-23       Impact factor: 13.423

6.  Combining metabolic and protein engineering of a terpenoid biosynthetic pathway for overproduction and selectivity control.

Authors:  Effendi Leonard; Parayil Kumaran Ajikumar; Kelly Thayer; Wen-Hai Xiao; Jeffrey D Mo; Bruce Tidor; Gregory Stephanopoulos; Kristala L J Prather
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-19       Impact factor: 11.205

Review 7.  The biosynthesis of C5-C25 terpenoid compounds.

Authors:  Paul M Dewick
Journal:  Nat Prod Rep       Date:  2002-04       Impact factor: 13.423

8.  Mutagenesis of a modular polyketide synthase enoylreductase domain reveals insights into catalysis and stereospecificity.

Authors:  David H Kwan; Peter F Leadlay
Journal:  ACS Chem Biol       Date:  2010-09-17       Impact factor: 5.100

9.  Exploitation of the selectivity-conferring code of nonribosomal peptide synthetases for the rational design of novel peptide antibiotics.

Authors:  Katrin Eppelmann; Torsten Stachelhaus; Mohamed A Marahiel
Journal:  Biochemistry       Date:  2002-07-30       Impact factor: 3.162

10.  Point mutations (Q19P and N23K) increase the operational solubility of a 2alpha-O-benzoyltransferase that conveys various acyl groups from CoA to a taxane acceptor.

Authors:  Irosha N Nawarathne; Kevin D Walker
Journal:  J Nat Prod       Date:  2010-02-26       Impact factor: 4.050

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  7 in total

1.  Structural basis of functional group activation by sulfotransferases in complex metabolic pathways.

Authors:  Jennifer Gehret McCarthy; Eli B Eisman; Sarang Kulkarni; Lena Gerwick; William H Gerwick; Peter Wipf; David H Sherman; Janet L Smith
Journal:  ACS Chem Biol       Date:  2012-09-26       Impact factor: 5.100

Review 2.  Synthetic biological approaches to natural product biosynthesis.

Authors:  Jaclyn M Winter; Yi Tang
Journal:  Curr Opin Biotechnol       Date:  2012-01-03       Impact factor: 9.740

3.  Investigation of fungal iterative polyketide synthase functions using partially assembled intermediates.

Authors:  Zhizeng Gao; Jingjing Wang; Amy K Norquay; Kangjian Qiao; Yi Tang; John C Vederas
Journal:  J Am Chem Soc       Date:  2013-01-28       Impact factor: 15.419

4.  Divergent evolution of an atypical S-adenosyl-l-methionine-dependent monooxygenase involved in anthracycline biosynthesis.

Authors:  Thadée Grocholski; Pedro Dinis; Laila Niiranen; Jarmo Niemi; Mikko Metsä-Ketelä
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-27       Impact factor: 11.205

Review 5.  Iterative polyketide biosynthesis by modular polyketide synthases in bacteria.

Authors:  Haotong Chen; Liangcheng Du
Journal:  Appl Microbiol Biotechnol       Date:  2015-11-09       Impact factor: 4.813

6.  Protein Engineering of a Germacrene A Synthase From Lactuca sativa and Its Application in High Productivity of Germacrene A in Escherichia coli.

Authors:  Rong Chen; Yuheng Liu; Shu Chen; Ming Wang; Yao Zhu; Tianyuan Hu; Qiuhui Wei; Xiaopu Yin; Tian Xie
Journal:  Front Plant Sci       Date:  2022-08-11       Impact factor: 6.627

7.  Biosynthetic engineering of the antifungal, anti-MRSA auroramycin.

Authors:  Wan Lin Yeo; Elena Heng; Lee Ling Tan; Yi Wee Lim; Kuan Chieh Ching; De-Juin Tsai; Yi Wun Jhang; Tsai-Ling Lauderdale; Kak-Shan Shia; Huimin Zhao; Ee Lui Ang; Mingzi M Zhang; Yee Hwee Lim; Fong T Wong
Journal:  Microb Cell Fact       Date:  2020-01-06       Impact factor: 5.328

  7 in total

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