Literature DB >> 21987789

Cellular prion protein conformation and function.

Fred F Damberger1, Barbara Christen, Daniel R Pérez, Simone Hornemann, Kurt Wüthrich.   

Abstract

In the otherwise highly conserved NMR structures of cellular prion proteins (PrP(C)) from different mammals, species variations in a surface epitope that includes a loop linking a β-strand, β2, with a helix, α2, are associated with NMR manifestations of a dynamic equilibrium between locally different conformations. Here, it is shown that this local dynamic conformational polymorphism in mouse PrP(C) is eliminated through exchange of Tyr169 by Ala or Gly, but is preserved after exchange of Tyr 169 with Phe. NMR structure determinations of designed variants of mouse PrP(121-231) at 20 °C and of wild-type mPrP(121-231) at 37 °C together with analysis of exchange effects on NMR signals then resulted in the identification of the two limiting structures involved in this local conformational exchange in wild-type mouse PrP(C), and showed that the two exchanging structures present characteristically different solvent-exposed epitopes near the β2-α2 loop. The structural data presented in this paper provided a platform for currently ongoing, rationally designed experiments with transgenic laboratory animals for renewed attempts to unravel the so far elusive physiological function of the cellular prion protein.

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Year:  2011        PMID: 21987789      PMCID: PMC3198368          DOI: 10.1073/pnas.1106325108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

2.  Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Biomol NMR       Date:  2002-11       Impact factor: 2.835

3.  NMR solution structure of the human prion protein.

Authors:  R Zahn; A Liu; T Lührs; R Riek; C von Schroetter; F López García; M Billeter; L Calzolai; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

Review 4.  The anatomy and taxonomy of protein structure.

Authors:  J S Richardson
Journal:  Adv Protein Chem       Date:  1981

5.  NMR structure of the bovine prion protein.

Authors:  F López Garcia; R Zahn; R Riek; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

6.  Unique structural characteristics of the rabbit prion protein.

Authors:  Yi Wen; Jun Li; Wenming Yao; Minqian Xiong; Jing Hong; Yu Peng; Gengfu Xiao; Donghai Lin
Journal:  J Biol Chem       Date:  2010-07-16       Impact factor: 5.157

7.  Prion protein NMR structure from tammar wallaby (Macropus eugenii) shows that the beta2-alpha2 loop is modulated by long-range sequence effects.

Authors:  Barbara Christen; Simone Hornemann; Fred F Damberger; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2009-04-23       Impact factor: 5.469

8.  Molecular evolution of the mammalian prion protein.

Authors:  Teun van Rheede; Marcel M W Smolenaars; Ole Madsen; Wilfried W de Jong
Journal:  Mol Biol Evol       Date:  2003-01       Impact factor: 16.240

9.  Prion protein interaction with the C-terminal SH3 domain of Grb2 studied using NMR and optical spectroscopy.

Authors:  Dominikus A Lysek; Kurt Wüthrich
Journal:  Biochemistry       Date:  2004-08-17       Impact factor: 3.162

10.  NMR structure of the bank vole prion protein at 20 degrees C contains a structured loop of residues 165-171.

Authors:  Barbara Christen; Daniel R Pérez; Simone Hornemann; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2008-08-26       Impact factor: 5.469

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  24 in total

1.  Structural plasticity of the cellular prion protein and implications in health and disease.

Authors:  Barbara Christen; Fred F Damberger; Daniel R Pérez; Simone Hornemann; Kurt Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-06       Impact factor: 11.205

2.  Increased infectivity of anchorless mouse scrapie prions in transgenic mice overexpressing human prion protein.

Authors:  Brent Race; Katie Phillips; Kimberly Meade-White; James Striebel; Bruce Chesebro
Journal:  J Virol       Date:  2015-03-25       Impact factor: 5.103

Review 3.  Prions: Beyond a Single Protein.

Authors:  Alvin S Das; Wen-Quan Zou
Journal:  Clin Microbiol Rev       Date:  2016-07       Impact factor: 26.132

4.  Structural and dynamic properties of the human prion protein.

Authors:  Wei Chen; Marc W van der Kamp; Valerie Daggett
Journal:  Biophys J       Date:  2014-03-04       Impact factor: 4.033

5.  Prion protein β2-α2 loop conformational landscape.

Authors:  Enrico Caldarulo; Alessandro Barducci; Kurt Wüthrich; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-21       Impact factor: 11.205

Review 6.  Transition of the prion protein from a structured cellular form (PrPC ) to the infectious scrapie agent (PrPSc ).

Authors:  Pravas K Baral; Jiang Yin; Adriano Aguzzi; Michael N G James
Journal:  Protein Sci       Date:  2019-10-25       Impact factor: 6.725

7.  Conformation-dependent epitopes recognized by prion protein antibodies probed using mutational scanning and deep sequencing.

Authors:  Kyle M Doolan; David W Colby
Journal:  J Mol Biol       Date:  2014-11-07       Impact factor: 5.469

8.  The roles of the conserved tyrosine in the β2-α2 loop of the prion protein.

Authors:  Danzhi Huang; Amedeo Caflisch
Journal:  Prion       Date:  2015       Impact factor: 3.931

9.  Prion transmission prevented by modifying the β2-α2 loop structure of host PrPC.

Authors:  Timothy D Kurt; Cyrus Bett; Natalia Fernández-Borges; Shivanjali Joshi-Barr; Simone Hornemann; Thomas Rülicke; Joaquín Castilla; Kurt Wüthrich; Adriano Aguzzi; Christina J Sigurdson
Journal:  J Neurosci       Date:  2014-01-15       Impact factor: 6.167

10.  Prion Protein-Antibody Complexes Characterized by Chromatography-Coupled Small-Angle X-Ray Scattering.

Authors:  Lester Carter; Seung Joong Kim; Dina Schneidman-Duhovny; Jan Stöhr; Guillaume Poncet-Montange; Thomas M Weiss; Hiro Tsuruta; Stanley B Prusiner; Andrej Sali
Journal:  Biophys J       Date:  2015-08-18       Impact factor: 4.033

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