Literature DB >> 23650394

Structural plasticity of the cellular prion protein and implications in health and disease.

Barbara Christen1, Fred F Damberger, Daniel R Pérez, Simone Hornemann, Kurt Wüthrich.   

Abstract

Two lines of transgenic mice expressing mouse/elk and mouse/horse prion protein (PrP) hybrids, which both form a well-structured β2-α2 loop in the NMR structures at 20 °C termed rigid-loop cellular prion proteins (RL-PrP(C)), presented with accumulation of the aggregated scrapie form of PrP in brain tissue, and the mouse/elk hybrid has also been shown to develop a spontaneous transmissible spongiform encephalopathy. Independently, there is in vitro evidence for correlations between the amino acid sequence in the β2-α2 loop and the propensity for conformational transitions to disease-related forms of PrP. To further contribute to the structural basis for these observations, this paper presents a detailed characterization of RL-PrP(C) conformations in solution. A dynamic local conformational polymorphism involving the β2-α2 loop was found to be evolutionarily preserved among all mammalian species, including those species for which the WT PrP forms an RL-PrP(C). The interconversion between two ensembles of PrP(C) conformers that contain, respectively, a 310-helix turn or a type I β-turn structure of the β2-α2 loop, exposes two different surface epitopes, which are analyzed for their possible roles in the still evasive function of PrP(C) in healthy organisms and/or at the onset of a transmissible spongiform encephalopathy.

Entities:  

Keywords:  NMR line shape analysis; conformational equilibrium; prion protein stability; protein dynamics

Mesh:

Substances:

Year:  2013        PMID: 23650394      PMCID: PMC3666714          DOI: 10.1073/pnas.1306178110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  69 in total

1.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

2.  High hydrophobic amino acid exposure is responsible of the neurotoxic effects induced by E200K or D202N disease-related mutations of the human prion protein.

Authors:  Alessandro Corsaro; Stefano Thellung; Tonino Bucciarelli; Luca Scotti; Katia Chiovitti; Valentina Villa; Cristina D'Arrigo; Antonio Aceto; Tullio Florio
Journal:  Int J Biochem Cell Biol       Date:  2010-11-19       Impact factor: 5.085

3.  Prion disease susceptibility is affected by beta-structure folding propensity and local side-chain interactions in PrP.

Authors:  M Qasim Khan; Braden Sweeting; Vikram Khipple Mulligan; Pharhad Eli Arslan; Neil R Cashman; Emil F Pai; Avijit Chakrabartty
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

4.  NMR solution structure of the human prion protein.

Authors:  R Zahn; A Liu; T Lührs; R Riek; C von Schroetter; F López García; M Billeter; L Calzolai; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

5.  Common structural traits across pathogenic mutants of the human prion protein and their implications for familial prion diseases.

Authors:  Giulia Rossetti; Xiaojing Cong; Rocco Caliandro; Giuseppe Legname; Paolo Carloni
Journal:  J Mol Biol       Date:  2011-06-12       Impact factor: 5.469

6.  NMR structure of the bovine prion protein.

Authors:  F López Garcia; R Zahn; R Riek; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

7.  Structural facets of disease-linked human prion protein mutants: a molecular dynamic study.

Authors:  Giulia Rossetti; Gabriele Giachin; Giuseppe Legname; Paolo Carloni
Journal:  Proteins       Date:  2010-12

Review 8.  Prion diseases of humans and animals: their causes and molecular basis.

Authors:  J Collinge
Journal:  Annu Rev Neurosci       Date:  2001       Impact factor: 12.449

9.  Practical aspects of the 2D 15N-[1h]-NOE experiment.

Authors:  Christian Renner; Michael Schleicher; Luis Moroder; Tad A Holak
Journal:  J Biomol NMR       Date:  2002-05       Impact factor: 2.835

10.  Dynamic diagnosis of familial prion diseases supports the β2-α2 loop as a universal interference target.

Authors:  Massimiliano Meli; Maria Gasset; Giorgio Colombo
Journal:  PLoS One       Date:  2011-04-28       Impact factor: 3.240

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  14 in total

Review 1.  Biological Spectrum of Amyotrophic Lateral Sclerosis Prions.

Authors:  Magdalini Polymenidou; Don W Cleveland
Journal:  Cold Spring Harb Perspect Med       Date:  2017-11-01       Impact factor: 6.915

2.  Negative purifying selection drives prion and doppel protein evolution.

Authors:  Kyriakos Tsangaras; Sergios-Orestis Kolokotronis; Rainer G Ulrich; Serge Morand; Johan Michaux; Alex D Greenwood
Journal:  J Mol Evol       Date:  2014-07-20       Impact factor: 2.395

3.  A seven-residue deletion in PrP leads to generation of a spontaneous prion formed from C-terminal C1 fragment of PrP.

Authors:  Carola Munoz-Montesino; Djabir Larkem; Clément Barbereau; Angélique Igel-Egalon; Sandrine Truchet; Eric Jacquet; Naïma Nhiri; Mohammed Moudjou; Christina Sizun; Human Rezaei; Vincent Béringue; Michel Dron
Journal:  J Biol Chem       Date:  2020-08-11       Impact factor: 5.157

4.  Prion protein β2-α2 loop conformational landscape.

Authors:  Enrico Caldarulo; Alessandro Barducci; Kurt Wüthrich; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-21       Impact factor: 11.205

Review 5.  Transition of the prion protein from a structured cellular form (PrPC ) to the infectious scrapie agent (PrPSc ).

Authors:  Pravas K Baral; Jiang Yin; Adriano Aguzzi; Michael N G James
Journal:  Protein Sci       Date:  2019-10-25       Impact factor: 6.725

6.  The roles of the conserved tyrosine in the β2-α2 loop of the prion protein.

Authors:  Danzhi Huang; Amedeo Caflisch
Journal:  Prion       Date:  2015       Impact factor: 3.931

7.  Prion transmission prevented by modifying the β2-α2 loop structure of host PrPC.

Authors:  Timothy D Kurt; Cyrus Bett; Natalia Fernández-Borges; Shivanjali Joshi-Barr; Simone Hornemann; Thomas Rülicke; Joaquín Castilla; Kurt Wüthrich; Adriano Aguzzi; Christina J Sigurdson
Journal:  J Neurosci       Date:  2014-01-15       Impact factor: 6.167

8.  Prion Protein-Antibody Complexes Characterized by Chromatography-Coupled Small-Angle X-Ray Scattering.

Authors:  Lester Carter; Seung Joong Kim; Dina Schneidman-Duhovny; Jan Stöhr; Guillaume Poncet-Montange; Thomas M Weiss; Hiro Tsuruta; Stanley B Prusiner; Andrej Sali
Journal:  Biophys J       Date:  2015-08-18       Impact factor: 4.033

9.  The role of Cys179-Cys214 disulfide bond in the stability and folding of prion protein: insights from molecular dynamics simulations.

Authors:  Lulu Ning; Jingjing Guo; Nengzhi Jin; Huanxiang Liu; Xiaojun Yao
Journal:  J Mol Model       Date:  2014-02-11       Impact factor: 1.810

10.  A proposed mechanism for the promotion of prion conversion involving a strictly conserved tyrosine residue in the β2-α2 loop of PrPC.

Authors:  Timothy D Kurt; Lin Jiang; Cyrus Bett; David Eisenberg; Christina J Sigurdson
Journal:  J Biol Chem       Date:  2014-03-04       Impact factor: 5.157

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