Literature DB >> 10618385

NMR solution structure of the human prion protein.

R Zahn1, A Liu, T Lührs, R Riek, C von Schroetter, F López García, M Billeter, L Calzolai, G Wider, K Wüthrich.   

Abstract

The NMR structures of the recombinant human prion protein, hPrP(23-230), and two C-terminal fragments, hPrP(90-230) and hPrP(121-230), include a globular domain extending from residues 125-228, for which a detailed structure was obtained, and an N-terminal flexibly disordered "tail." The globular domain contains three alpha-helices comprising the residues 144-154, 173-194, and 200-228 and a short anti-parallel beta-sheet comprising the residues 128-131 and 161-164. Within the globular domain, three polypeptide segments show increased structural disorder: i.e., a loop of residues 167-171, the residues 187-194 at the end of helix 2, and the residues 219-228 in the C-terminal part of helix 3. The local conformational state of the polypeptide segments 187-193 in helix 2 and 219-226 in helix 3 is measurably influenced by the length of the N-terminal tail, with the helical states being most highly populated in hPrP(23-230). When compared with the previously reported structures of the murine and Syrian hamster prion proteins, the length of helix 3 coincides more closely with that in the Syrian hamster protein whereas the disordered loop 167-171 is shared with murine PrP. These species variations of local structure are in a surface area of the cellular form of PrP that has previously been implicated in intermolecular interactions related both to the species barrier for infectious transmission of prion disease and to immune reactions.

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Year:  2000        PMID: 10618385      PMCID: PMC26630          DOI: 10.1073/pnas.97.1.145

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

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2.  Separation and properties of cellular and scrapie prion proteins.

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3.  The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.

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4.  Torsion angle dynamics for NMR structure calculation with the new program DYANA.

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5.  Structure of the recombinant full-length hamster prion protein PrP(29-231): the N terminus is highly flexible.

Authors:  D G Donne; J H Viles; D Groth; I Mehlhorn; T L James; F E Cohen; S B Prusiner; P E Wright; H J Dyson
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

6.  Protein dynamics studied by rotating frame 15N spin relaxation times.

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Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

7.  Prion (PrPSc)-specific epitope defined by a monoclonal antibody.

Authors:  C Korth; B Stierli; P Streit; M Moser; O Schaller; R Fischer; W Schulz-Schaeffer; H Kretzschmar; A Raeber; U Braun; F Ehrensperger; S Hornemann; R Glockshuber; R Riek; M Billeter; K Wüthrich; B Oesch
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Authors:  D Neri; T Szyperski; G Otting; H Senn; K Wüthrich
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9.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
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10.  Prion protein NMR structure and familial human spongiform encephalopathies.

Authors:  R Riek; G Wider; M Billeter; S Hornemann; R Glockshuber; K Wüthrich
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  314 in total

1.  Immobilized prion protein undergoes spontaneous rearrangement to a conformation having features in common with the infectious form.

Authors:  E Leclerc; D Peretz; H Ball; H Sakurai; G Legname; A Serban; S B Prusiner; D R Burton; R A Williamson
Journal:  EMBO J       Date:  2001-04-02       Impact factor: 11.598

2.  Identification of interaction domains of the prion protein with its 37-kDa/67-kDa laminin receptor.

Authors:  C Hundt; J M Peyrin; S Haïk; S Gauczynski; C Leucht; R Rieger; M L Riley; J P Deslys; D Dormont; C I Lasmézas; S Weiss
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Review 3.  The molecular pathology of CJD: old and new variants.

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4.  The role of dimerization in prion replication.

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5.  Structural studies of the scrapie prion protein by electron crystallography.

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-12       Impact factor: 11.205

Review 6.  3D domain swapping: as domains continue to swap.

Authors:  Yanshun Liu; David Eisenberg
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

7.  Computational studies on prion proteins: effect of Ala(117)-->Val mutation.

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8.  Proteins with H-bond packing defects are highly interactive with lipid bilayers: Implications for amyloidogenesis.

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-18       Impact factor: 11.205

9.  Competing intrachain interactions regulate the formation of beta-sheet fibrils in bovine PrP peptides.

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Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

10.  Dynamics of a truncated prion protein, PrP(113-231), from (15)N NMR relaxation: order parameters calculated and slow conformational fluctuations localized to a distinct region.

Authors:  Denis B D O'Sullivan; Christopher E Jones; Salama R Abdelraheim; Marcus W Brazier; Harold Toms; David R Brown; John H Viles
Journal:  Protein Sci       Date:  2009-02       Impact factor: 6.725

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