| Literature DB >> 21984948 |
Lena M Wulfken1, Rudolf Moritz, Carsten Ohlmann, Stefan Holdenrieder, Volker Jung, Frank Becker, Edwin Herrmann, Gisela Walgenbach-Brünagel, Alexander von Ruecker, Stefan C Müller, Jörg Ellinger.
Abstract
BACKGROUND: MicroRNA expression is altered in cancer cells, and microRNAs could serve as diagnostic/prognostic biomarker for cancer patients. Our study was designed to analyze circulating serum microRNAs in patients with renal cell carcinoma (RCC). METHODOLOGY/PRINCIPALEntities:
Mesh:
Substances:
Year: 2011 PMID: 21984948 PMCID: PMC3184173 DOI: 10.1371/journal.pone.0025787
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow Chart: Verification of miR-1233 as diagnostic marker of renal cell carcinoma.
Clinical-pathological parameters.
| PHASE I | PHASE II | PHASE III | |||||
| RCC | HI | RCC | HI | RCC | HI | BRT | |
|
| |||||||
| male | 3 | 3 | 27 | 21 | 56 | 68 | 6 |
| female | 3 | 3 | 6 | 9 | 28 | 25 | 7 |
|
| |||||||
| mean | 66.0 | 47.7 | 62.7 | 60.2 | 60.9 | 63.7 | 59.5 |
| median | 66.0 | 47.5 | 65.0 | 63.0 | 63.0 | 64.0 | 63.0 |
| range | 57–75 | 40–60 | 43–80 | 26–85 | 25–82 | 28–88 | 21–84 |
|
| |||||||
| ccRCC | 6 | n.a. | 33 | n.a. | 69 | n.a. | n.a. |
| pRCC | 0 | n.a. | 0 | n.a. | 10 | n.a. | n.a. |
| chRCC | 0 | n.a. | 0 | n.a. | 3 | n.a. | n.a. |
| sRCC | 0 | n.a. | 0 | n.a. | 2 | n.a. | n.a. |
|
| |||||||
| pT1 | 2 | n.a. | 23 | n.a. | 55 | n.a. | n.a. |
| pT2 | 1 | n.a. | 3 | n.a. | 4 | n.a. | n.a. |
| pT3 | 3 | n.a. | 7 | n.a. | 23 | n.a. | n.a. |
| pT4 | 0 | n.a. | 0 | n.a. | 2 | n.a. | n.a. |
| vascular invasion | 3 | n.a. | 3 | n.a. | 12 | n.a. | n.a. |
| lymph node metastasis | 0 | n.a. | 0 | n.a. | 8 | n.a. | n.a. |
| distant metastasis | 0 | n.a. | 0 | n.a. | 5 | n.a. | n.a. |
|
| |||||||
| G1 | 0 | n.a. | 4 | n.a. | 11 | n.a. | n.a. |
| G2 | 6 | n.a. | 28 | n.a. | 62 | n.a. | n.a. |
| G3 | 0 | n.a. | 1 | n.a. | 8 | n.a. | n.a. |
| G4 | 0 | n.a. | 0 | n.a. | 3 | n.a. | n.a. |
Abbreviations: RCC, renal cell carcinoma; HI, healthy individuals; BRT, benigne renal tumor; ccRCC, clear cell RCC; pRCC, papillary RCC; chRCC, chromophobe RCC; sRCC, sarcomatoid RCC; n.a., not applicable.
Figure 2Serum microRNA levels in patients with renal cell carcinoma, benign renal tumors and healthy controls.
MicroRNAs were profiled in serum and tissue of patients with clear cell renal cell carcinoma (ccRCC) and healthy controls (each n = 6) using the TaqMan Low Density Array; 36 microRNAs were upregulated in RCC tissue and serum of RCC patients (Phase-1). Seven microRNAs were chosen for verification using real-time PCR in a cohort of 33 ccRCC and 30 healthy individuals (Phase-2). In Phase-3, the finding of increased serum miR-1233 levels in RCC patients was confirmed in a multicentre cohort of 84 RCC, 93 healthy and 13 benign renal tumors (BRT). MicroRNA recovery (as determined using quantification of the synthetic miR-39) was similar in the study centers (UKB, UKM, UKS); the level of miR-1233 were somewhat higher in patients from UKM.
MicroRNAs with >2-fold overexpression in serum and tissue of renal cell carcinoma patients.
| microRNA | Assay-ID | expression tissue | expression serum |
| miR-106b | 002380 | 2.708 | 11.784 |
| miR-1233 | 002768 | 2.021 | 10.600 |
| miR-1290 | 002863 | 2.811 | 6.984 |
| miR-30d* | 002305 | 6.209 | 5.746 |
| miR-210 | 4373089 | 20.718 | 5.685 |
| miR-425* | 002302 | 3.963 | 5.091 |
| miR-7-1 | 001338 | 2.487 | 5.051 |
| miR-190b | 002263 | 2.066 | 4.769 |
| miR-30b | 002984 | 2.103 | 4.526 |
| miR-93 | 4373302 | 2.488 | 4.429 |
| miR-374a | 002125 | 4.304 | 4.385 |
| miR-223 | 002098 | 2.486 | 3.972 |
| miR-15a | 4373123 | 3.438 | 3.927 |
| miR-223 | 4395406 | 3.008 | 3.774 |
| miR-942 | 002187 | 2.450 | 3.591 |
| miR-590-5p | 4395176 | 2.239 | 3.542 |
| miR-642 | 4380995 | 4.241 | 3.260 |
| miR-193 | 4395392 | 2.417 | 3.257 |
| miR-635* | 002432 | 2.193 | 3.023 |
| miR-19a | 4373099 | 2.004 | 2.864 |
| miR-155 | 4395459 | 12.898 | 2.860 |
| miR-16 | 4373121 | 2.128 | 2.813 |
| miR-629* | 001562 | 2.814 | 2.796 |
| miR-34b | 002102 | 2.556 | 2.720 |
| miR-301b | 4395503 | 2.765 | 2.534 |
| miR-1271 | 002779 | 3.305 | 2.504 |
| miR-130b | 4373144 | 2.060 | 2.478 |
| miR-195 | 4373105 | 2.885 | 2.413 |
| miR-181a | 00516 | 2.563 | 2.386 |
| miR-21 | 4373090 | 4.552 | 2.355 |
| miR-142-5p | 4395359 | 8.588 | 2.239 |
| miR-629 | 4395547 | 2.972 | 2.186 |
| miR-25 | 4373071 | 2.346 | 2.176 |
| miR-16-1* | 002420 | 2.360 | 2.061 |
| miR-15b | 4373122 | 3.318 | 2.034 |
| miR-23a | 4373074 | 2.128 | 2.017 |