Literature DB >> 21971967

Diversity and phylogeny of the ectoine biosynthesis genes in aerobic, moderately halophilic methylotrophic bacteria.

Alexander S Reshetnikov1, Valentina N Khmelenina, Ildar I Mustakhimov, Marina Kalyuzhnaya, Mary Lidstrom, Yuri A Trotsenko.   

Abstract

The genes of ectoine biosynthesis pathway were identified in six species of aerobic, slightly halophilic bacteria utilizing methane, methanol or methylamine. Two types of ectoine gene cluster organization were revealed in the methylotrophs. The gene cluster ectABC coding for diaminobutyric acid (DABA) acetyltransferase (EctA), DABA aminotransferase (EctB) and ectoine synthase (EctC) was found in methanotrophs Methylobacter marinus 7C and Methylomicrobium kenyense AMO1(T). In methanotroph Methylomicrobium alcaliphilum ML1, methanol-utilizers Methylophaga thalassica 33146(T) , Methylophaga alcalica M8 and methylamine-utilizer Methylarcula marina h1(T), the genes forming the ectABC-ask operon are preceded by ectR, encoding a putative transcriptional regulatory protein EctR. Phylogenetic relationships of the Ect proteins do not correlate with phylogenetic affiliation of the strains, thus implying that the ability of methylotrophs to produce ectoine is most likely the result of a horizontal transfer event.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21971967     DOI: 10.1007/s00792-011-0396-x

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  36 in total

Review 1.  Towards the molecular mechanism of Na(+)/solute symport in prokaryotes.

Authors:  H Jung
Journal:  Biochim Biophys Acta       Date:  2001-05-01

2.  An obligate methylotrophic, methane-oxidizing Methylomicrobium species from a highly alkaline environment.

Authors:  D Y Sorokin; B E Jones; J G Kuenen
Journal:  Extremophiles       Date:  2000-06       Impact factor: 2.395

Review 3.  Cohesion group approach for evolutionary analysis of aspartokinase, an enzyme that feeds a branched network of many biochemical pathways.

Authors:  Chien-Chi Lo; Carol A Bonner; Gary Xie; Mark D'Souza; Roy A Jensen
Journal:  Microbiol Mol Biol Rev       Date:  2009-12       Impact factor: 11.056

Review 4.  Methanotrophic bacteria.

Authors:  R S Hanson; T E Hanson
Journal:  Microbiol Rev       Date:  1996-06

5.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

6.  Characterization of the ectoine biosynthesis genes of haloalkalotolerant obligate methanotroph "Methylomicrobium alcaliphilum 20Z".

Authors:  Alexander S Reshetnikov; Valentina N Khmelenina; Yuri A Trotsenko
Journal:  Arch Microbiol       Date:  2005-11-10       Impact factor: 2.552

7.  Osmoadaptation in halophilic and alkaliphilic methanotrophs

Authors: 
Journal:  Arch Microbiol       Date:  1999-11       Impact factor: 2.552

8.  Extrinsic protein stabilization by the naturally occurring osmolytes beta-hydroxyectoine and betaine.

Authors:  S Knapp; R Ladenstein; E A Galinski
Journal:  Extremophiles       Date:  1999-08       Impact factor: 2.395

9.  Molecular phylogeny of the Drosophila melanogaster species subgroup.

Authors:  Wen-Ya Ko; Ryan M David; Hiroshi Akashi
Journal:  J Mol Evol       Date:  2003-11       Impact factor: 2.395

10.  Unravelling the adaptation responses to osmotic and temperature stress in Chromohalobacter salexigens, a bacterium with broad salinity tolerance.

Authors:  Carmen Vargas; Montserrat Argandoña; Mercedes Reina-Bueno; Javier Rodríguez-Moya; Cristina Fernández-Aunión; Joaquín J Nieto
Journal:  Saline Systems       Date:  2008-09-15
View more
  13 in total

1.  Changing bacterial profile of Sundarbans, the world heritage mangrove: impact of anthropogenic interventions.

Authors:  Arpita Chakraborty; Amit Bera; Arghya Mukherjee; Pijush Basak; Imroze Khan; Arindam Mondal; Arunava Roy; Anish Bhattacharyya; Sohan SenGupta; Debojyoti Roy; Sudip Nag; Abhrajyoti Ghosh; Dhrubajyoti Chattopadhyay; Maitree Bhattacharyya
Journal:  World J Microbiol Biotechnol       Date:  2015-02-06       Impact factor: 3.312

2.  Identification and characterization of ectoine biosynthesis genes and heterologous expression of the ectABC gene cluster from Halomonas sp. QHL1, a moderately halophilic bacterium isolated from Qinghai Lake.

Authors:  Derui Zhu; Jian Liu; Rui Han; Guoping Shen; Qifu Long; Xiaoxing Wei; Deli Liu
Journal:  J Microbiol       Date:  2014-02-01       Impact factor: 3.422

Review 3.  Role of the Extremolytes Ectoine and Hydroxyectoine as Stress Protectants and Nutrients: Genetics, Phylogenomics, Biochemistry, and Structural Analysis.

Authors:  Laura Czech; Lucas Hermann; Nadine Stöveken; Alexandra A Richter; Astrid Höppner; Sander H J Smits; Johann Heider; Erhard Bremer
Journal:  Genes (Basel)       Date:  2018-03-22       Impact factor: 4.096

4.  Comparative genomics of the plant-growth promoting bacterium Sphingobium sp. strain AEW4 isolated from the rhizosphere of the beachgrass Ammophila breviligulata.

Authors:  Brianna L Boss; Abanoub E Wanees; Shari J Zaslow; Tyler G Normile; Javier A Izquierdo
Journal:  BMC Genomics       Date:  2022-07-13       Impact factor: 4.547

5.  Ectoine biosynthesis in Mycobacterium smegmatis.

Authors:  Naomi Ofer; Marina Wishkautzan; Michael Meijler; Ying Wang; Alexander Speer; Michael Niederweis; Eyal Gur
Journal:  Appl Environ Microbiol       Date:  2012-08-10       Impact factor: 4.792

6.  The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.

Authors:  Alexandra A Richter; Stefanie Kobus; Laura Czech; Astrid Hoeppner; Jan Zarzycki; Tobias J Erb; Lukas Lauterbach; Jeroen S Dickschat; Erhard Bremer; Sander H J Smits
Journal:  J Biol Chem       Date:  2020-01-22       Impact factor: 5.157

Review 7.  Specialized Metabolites from Methylotrophic Proteobacteria.

Authors:  Aaron W Puri
Journal:  Curr Issues Mol Biol       Date:  2019-06-05       Impact factor: 2.081

8.  Biochemical properties of ectoine hydroxylases from extremophiles and their wider taxonomic distribution among microorganisms.

Authors:  Nils Widderich; Astrid Höppner; Marco Pittelkow; Johann Heider; Sander H J Smits; Erhard Bremer
Journal:  PLoS One       Date:  2014-04-08       Impact factor: 3.240

9.  Draft Genome Sequence of Methyloligella halotolerans С2T, a New Halotolerant Methylotroph, Accumulating Poly-3-Hydroxybutyrate and Ectoine.

Authors:  Oleg V Vasilenko; Nina V Doronina; Maria N Shmareva; Sergey V Tarlachkov; Yuri A Trotsenko
Journal:  Genome Announc       Date:  2016-10-27

10.  Draft Genome Sequence of Methylophaga muralis Bur 1, a Haloalkaliphilic (Non-Methane-Utilizing) Methylotroph Isolated from a Soda Lake.

Authors:  Yuri A Trotsenko; Maria N Shmareva; Nina V Doronina; Sergey V Tarlachkov; Ildar I Mustakhimov; Oleg V Vasilenko
Journal:  Genome Announc       Date:  2016-11-03
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.