Literature DB >> 29565833

Role of the Extremolytes Ectoine and Hydroxyectoine as Stress Protectants and Nutrients: Genetics, Phylogenomics, Biochemistry, and Structural Analysis.

Laura Czech1, Lucas Hermann2, Nadine Stöveken3,4, Alexandra A Richter5, Astrid Höppner6, Sander H J Smits7,8, Johann Heider9,10, Erhard Bremer11,12.   

Abstract

Fluctuations in environmental osmolarity are ubiquitous stress factors in many natural habitats of microorganisms, as they inevitably trigger osmotically instigated fluxes of water across the semi-permeable cytoplasmic membrane. Under hyperosmotic conditions, many microorganisms fend off the detrimental effects of water efflux and the ensuing dehydration of the cytoplasm and drop in turgor through the accumulation of a restricted class of organic osmolytes, the compatible solutes. Ectoine and its derivative 5-hydroxyectoine are prominent members of these compounds and are synthesized widely by members of the Bacteria and a few Archaea and Eukarya in response to high salinity/osmolarity and/or growth temperature extremes. Ectoines have excellent function-preserving properties, attributes that have led to their description as chemical chaperones and fostered the development of an industrial-scale biotechnological production process for their exploitation in biotechnology, skin care, and medicine. We review, here, the current knowledge on the biochemistry of the ectoine/hydroxyectoine biosynthetic enzymes and the available crystal structures of some of them, explore the genetics of the underlying biosynthetic genes and their transcriptional regulation, and present an extensive phylogenomic analysis of the ectoine/hydroxyectoine biosynthetic genes. In addition, we address the biochemistry, phylogenomics, and genetic regulation for the alternative use of ectoines as nutrients.

Entities:  

Keywords:  biotechnology; chemical chaperones; crystal structures; enzymes; gene expression; genomics; growth temperature extremes; high salinity; osmotic stress

Year:  2018        PMID: 29565833      PMCID: PMC5924519          DOI: 10.3390/genes9040177

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  293 in total

Review 1.  Thermodynamic limits to microbial life at high salt concentrations.

Authors:  Aharon Oren
Journal:  Environ Microbiol       Date:  2010-11-05       Impact factor: 5.491

2.  Inhibition of protein aggregation in vitro and in vivo by a natural osmoprotectant.

Authors:  Zoya Ignatova; Lila M Gierasch
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-09       Impact factor: 11.205

3.  1.55 A structure of the ectoine binding protein TeaA of the osmoregulated TRAP-transporter TeaABC from Halomonas elongata.

Authors:  Sonja I Kuhlmann; Anke C Terwisscha van Scheltinga; Ralf Bienert; Hans-Jörg Kunte; Christine Ziegler
Journal:  Biochemistry       Date:  2008-08-15       Impact factor: 3.162

Review 4.  Osmosensing and osmoregulatory compatible solute accumulation by bacteria.

Authors:  J M Wood; E Bremer; L N Csonka; R Kraemer; B Poolman; T van der Heide; L T Smith
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2001-10       Impact factor: 2.320

5.  Osmoregulation in Lactococcus lactis: BusR, a transcriptional repressor of the glycine betaine uptake system BusA.

Authors:  Yves Romeo; David Obis; Jean Bouvier; Alain Guillot; Aude Fourçans; Isabelle Bouvier; Claude Gutierrez; Michel-Yves Mistou
Journal:  Mol Microbiol       Date:  2003-02       Impact factor: 3.501

Review 6.  How do mechanosensitive channels sense membrane tension?

Authors:  Tim Rasmussen
Journal:  Biochem Soc Trans       Date:  2016-08-15       Impact factor: 5.407

7.  Quaternary ammonium compounds can be abundant in some soils and are taken up as intact molecules by plants.

Authors:  Charles R Warren
Journal:  New Phytol       Date:  2013-02-12       Impact factor: 10.151

8.  Alternating-access mechanism in conformationally asymmetric trimers of the betaine transporter BetP.

Authors:  Camilo Perez; Caroline Koshy; Ozkan Yildiz; Christine Ziegler
Journal:  Nature       Date:  2012-09-02       Impact factor: 49.962

Review 9.  Molecular Mechanisms of Two-Component Signal Transduction.

Authors:  Christopher P Zschiedrich; Victoria Keidel; Hendrik Szurmant
Journal:  J Mol Biol       Date:  2016-08-09       Impact factor: 5.469

10.  Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding.

Authors:  Thirumananseri Kumarevel; Noboru Nakano; Karthe Ponnuraj; Subash C B Gopinath; Keiko Sakamoto; Akeo Shinkai; Penmetcha K R Kumar; Shigeyuki Yokoyama
Journal:  Nucleic Acids Res       Date:  2008-07-24       Impact factor: 16.971

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  31 in total

1.  Degradation of the microbial stress protectants and chemical chaperones ectoine and hydroxyectoine by a bacterial hydrolase-deacetylase complex.

Authors:  Christopher-Nils Mais; Lucas Hermann; Florian Altegoer; Andreas Seubert; Alexandra A Richter; Isa Wernersbach; Laura Czech; Erhard Bremer; Gert Bange
Journal:  J Biol Chem       Date:  2020-05-13       Impact factor: 5.157

2.  Transcriptome Analysis to Understand Salt Stress Regulation Mechanism of Chromohalobacter salexigens ANJ207.

Authors:  Alok Kumar Srivastava; Ruchi Srivastava; Anjney Sharma; Akhilendra Pratap Bharati; Jagriti Yadav; Alok Kumar Singh; Praveen Kumar Tiwari; Anchal Kumar Srivatava; Hillol Chakdar; Prem Lal Kashyap; Anil Kumar Saxena
Journal:  Front Microbiol       Date:  2022-06-30       Impact factor: 6.064

3.  Hydroxyectoine protects Mn-depleted photosystem II against photoinhibition acting as a source of electrons.

Authors:  D V Yanykin; M Malferrari; S Rapino; G Venturoli; A Yu Semenov; M D Mamedov
Journal:  Photosynth Res       Date:  2019-01-30       Impact factor: 3.573

4.  The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.

Authors:  Alexandra A Richter; Stefanie Kobus; Laura Czech; Astrid Hoeppner; Jan Zarzycki; Tobias J Erb; Lukas Lauterbach; Jeroen S Dickschat; Erhard Bremer; Sander H J Smits
Journal:  J Biol Chem       Date:  2020-01-22       Impact factor: 5.157

5.  Formulating bacterial endophyte: Pre-conditioning of cells and the encapsulation in amidated pectin beads.

Authors:  Mauricio Cruz Barrera; Desiree Jakobs-Schoenwandt; Martha Isabel Gómez; Juan Serrato; Silke Ruppel; Anant V Patel
Journal:  Biotechnol Rep (Amst)       Date:  2020-04-28

6.  Function of L-Pipecolic Acid as Compatible Solute in Corynebacterium glutamicum as Basis for Its Production Under Hyperosmolar Conditions.

Authors:  Fernando Pérez-García; Luciana F Brito; Volker F Wendisch
Journal:  Front Microbiol       Date:  2019-02-25       Impact factor: 5.640

7.  The inflammation-reducing compatible solute ectoine does not impair the cytotoxic effect of ionizing radiation on head and neck cancer cells.

Authors:  Thorsten Rieckmann; Fruzsina Gatzemeier; Sabrina Christiansen; Kai Rothkamm; Adrian Münscher
Journal:  Sci Rep       Date:  2019-04-29       Impact factor: 4.379

8.  Illuminating the catalytic core of ectoine synthase through structural and biochemical analysis.

Authors:  Laura Czech; Astrid Höppner; Stefanie Kobus; Andreas Seubert; Ramona Riclea; Jeroen S Dickschat; Johann Heider; Sander H J Smits; Erhard Bremer
Journal:  Sci Rep       Date:  2019-01-23       Impact factor: 4.379

Review 9.  The Effectiveness of the Bacteria Derived Extremolyte Ectoine for the Treatment of Allergic Rhinitis.

Authors:  Andreas Bilstein; Nina Werkhäuser; Anna Rybachuk; Ralph Mösges
Journal:  Biomed Res Int       Date:  2021-06-01       Impact factor: 3.411

10.  Phylogenomic Classification and Biosynthetic Potential of the Fossil Fuel-Biodesulfurizing Rhodococcus Strain IGTS8.

Authors:  Dean Thompson; Valérie Cognat; Michael Goodfellow; Sandrine Koechler; Dimitri Heintz; Christine Carapito; Alain Van Dorsselaer; Huda Mahmoud; Vartul Sangal; Wael Ismail
Journal:  Front Microbiol       Date:  2020-07-07       Impact factor: 5.640

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