Literature DB >> 25655378

Changing bacterial profile of Sundarbans, the world heritage mangrove: impact of anthropogenic interventions.

Arpita Chakraborty1, Amit Bera, Arghya Mukherjee, Pijush Basak, Imroze Khan, Arindam Mondal, Arunava Roy, Anish Bhattacharyya, Sohan SenGupta, Debojyoti Roy, Sudip Nag, Abhrajyoti Ghosh, Dhrubajyoti Chattopadhyay, Maitree Bhattacharyya.   

Abstract

Mangrove microbial communities and their associated activities have profound impact on biogeochemical cycles. Although microbial composition and structure are known to be influenced by biotic and abiotic factors in the mangrove sediments, finding direct correlations between them remains a challenge. In this study we have explored sediment bacterial diversity of the Sundarbans, a world heritage site using a culture-independent molecular approach. Bacterial diversity was analyzed from three different locations with a history of exposure to differential anthropogenic activities. 16S rRNA gene libraries were constructed and partial sequencing of the clones was performed to identify the microbial strains. We identified bacterial strains known to be involved in a variety of biodegradation/biotransformation processes including hydrocarbon degradation, and heavy metal resistance. Canonical Correspondence Analysis of the environmental and exploratory datasets revealed correlations between the ecological indices associated with pollutant levels and bacterial diversity across the sites. Our results indicate that sites with similar exposure of anthropogenic intervention reflect similar patterns of microbial diversity besides spatial commonalities.

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Year:  2015        PMID: 25655378     DOI: 10.1007/s11274-015-1814-5

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  52 in total

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4.  Culture independent molecular analysis of bacterial communities in the mangrove sediment of Sundarban, India.

Authors:  Abhrajyoti Ghosh; Nirmalya Dey; Amit Bera; Amit Tiwari; K B Sathyaniranjan; Kalyan Chakrabarti; Dhrubajyoti Chattopadhyay
Journal:  Saline Syst       Date:  2010-02-17

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Authors:  Kim M Handley; Nathan C VerBerkmoes; Carl I Steefel; Kenneth H Williams; Itai Sharon; Christopher S Miller; Kyle R Frischkorn; Karuna Chourey; Brian C Thomas; Manesh B Shah; Philip E Long; Robert L Hettich; Jillian F Banfield
Journal:  ISME J       Date:  2012-11-29       Impact factor: 10.302

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Journal:  PLoS One       Date:  2011-03-02       Impact factor: 3.240

9.  The microbiome of Brazilian mangrove sediments as revealed by metagenomics.

Authors:  Fernando Dini Andreote; Diego Javier Jiménez; Diego Chaves; Armando Cavalcante Franco Dias; Danice Mazzer Luvizotto; Francisco Dini-Andreote; Cristiane Cipola Fasanella; Maryeimy Varon Lopez; Sandra Baena; Rodrigo Gouvêa Taketani; Itamar Soares de Melo
Journal:  PLoS One       Date:  2012-06-21       Impact factor: 3.240

10.  Comparison of sulphate-reducing bacterial communities in Japanese fish farm sediments with different levels of organic enrichment.

Authors:  Ryuji Kondo; Yumi Mori; Tomoko Sakami
Journal:  Microbes Environ       Date:  2012       Impact factor: 2.912

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  11 in total

1.  Impact of soil salinity on the microbial structure of halophyte rhizosphere microbiome.

Authors:  Salma Mukhtar; Babur Saeed Mirza; Samina Mehnaz; Muhammad Sajjad Mirza; Joan Mclean; Kauser Abdulla Malik
Journal:  World J Microbiol Biotechnol       Date:  2018-08-20       Impact factor: 3.312

2.  Green-fabrication of gold nanomaterials using Staphylococcus warneri from Sundarbans estuary: an effective recyclable nanocatalyst for degrading nitro aromatic pollutants.

Authors:  Sudip Nag; Arnab Pramanik; Dhrubajyoti Chattopadhyay; Maitree Bhattacharyya
Journal:  Environ Sci Pollut Res Int       Date:  2017-11-09       Impact factor: 4.223

3.  Draft genome sequences of hydrocarbon degrading Haloferax sp. AB510, Haladaptatus sp. AB618 and Haladaptatus sp. AB643 isolated from the estuarine sediments of Sundarban mangrove forests, India.

Authors:  Shayantan Mukherji; Utpal Bakshi; Abhrajyoti Ghosh
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4.  Influence of physicochemical and nutritional factors on bacterial diversity in mangrove sediments along the southwest coast of Tamilnadu, India.

Authors:  S Prakash; R Ramasubburayan; P Iyapparaj; N K Ahila; V Sri Ramkumar; A Palavesam; G Immanuel; E Kannapiran
Journal:  Environ Monit Assess       Date:  2015-08-09       Impact factor: 2.513

5.  Cataloguing the bacterial diversity of the Sundarbans mangrove, India in the light of metagenomics.

Authors:  Pijush Basak; Arnab Pramanik; Ranita Roy; Dhrubajyoti Chattopadhyay; Maitree Bhattacharyya
Journal:  Genom Data       Date:  2015-04-07

6.  Bacterial diversity assessment of pristine mangrove microbial community from Dhulibhashani, Sundarbans using 16S rRNA gene tag sequencing.

Authors:  Pijush Basak; Arnab Pramanik; Sohan Sengupta; Sudip Nag; Anish Bhattacharyya; Debojyoti Roy; Rudradip Pattanayak; Abhrajyoti Ghosh; Dhrubajyoti Chattopadhyay; Maitree Bhattacharyya
Journal:  Genom Data       Date:  2015-12-01

7.  Diverse Profiles of AI-1 Type Quorum Sensing Molecules in Cultivable Bacteria from the Mangrove (Kandelia obovata) Rhizosphere Environment.

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Journal:  Front Microbiol       Date:  2016-12-05       Impact factor: 5.640

8.  Mangrove Facies Drives Resistance and Resilience of Sediment Microbes Exposed to Anthropic Disturbance.

Authors:  Cécile Capdeville; Thomas Pommier; Jonathan Gervaix; François Fromard; Jean-Luc Rols; Joséphine Leflaive
Journal:  Front Microbiol       Date:  2019-01-15       Impact factor: 5.640

9.  Diversity and Distribution of Archaea in the Mangrove Sediment of Sundarbans.

Authors:  Anish Bhattacharyya; Niladri Shekhar Majumder; Pijush Basak; Shayantan Mukherji; Debojyoti Roy; Sudip Nag; Anwesha Haldar; Dhrubajyoti Chattopadhyay; Suparna Mitra; Maitree Bhattacharyya; Abhrajyoti Ghosh
Journal:  Archaea       Date:  2015-08-06       Impact factor: 3.273

10.  Bioinformatic Approaches Including Predictive Metagenomic Profiling Reveal Characteristics of Bacterial Response to Petroleum Hydrocarbon Contamination in Diverse Environments.

Authors:  Arghya Mukherjee; Bobby Chettri; James S Langpoklakpam; Pijush Basak; Aravind Prasad; Ashis K Mukherjee; Maitree Bhattacharyya; Arvind K Singh; Dhrubajyoti Chattopadhyay
Journal:  Sci Rep       Date:  2017-04-24       Impact factor: 4.379

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