Literature DB >> 21969622

Digital scanned laser light-sheet fluorescence microscopy (DSLM) of zebrafish and Drosophila embryonic development.

Philipp J Keller, Annette D Schmidt, Jochen Wittbrodt, Ernst H K Stelzer.   

Abstract

Embryonic development is one of the most complex processes encountered in biology. In vertebrates and higher invertebrates, a single cell transforms into a fully functional organism comprising several tens of thousands of cells, arranged in tissues and organs that perform impressive tasks. In vivo observation of this biological process at high spatiotemporal resolution and over long periods of time is crucial for quantitative developmental biology. Importantly, such recordings must be realized without compromising the physiological development of the specimen. In digital scanned laser light-sheet fluorescence microscopy (DSLM), a specimen is rapidly scanned with a thin sheet of light while fluorescence is recorded perpendicular to the axis of illumination with a camera. Combining light-sheet technology and fast laser scanning, DSLM delivers quantitative data for entire embryos at high spatiotemporal resolution. Compared with confocal and two-photon fluorescence microscopy, DSLM exposes the embryo to at least three orders of magnitude less light energy, but still provides up to 50 times faster imaging speeds and a 10-100-fold higher signal-to-noise ratio. By using automated image processing algorithms, DSLM images of embryogenesis can be converted into a digital representation. These digital embryos permit following cells as a function of time, revealing cell fate as well as cell origin. By means of such analyses, developmental building plans of tissues and organs can be determined in a whole-embryo context. This article presents a sample preparation and imaging protocol for studying the development of whole zebrafish and Drosophila embryos using DSLM.

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Mesh:

Year:  2011        PMID: 21969622     DOI: 10.1101/pdb.prot065839

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  20 in total

1.  Why bioimage informatics matters.

Authors:  Gene Myers
Journal:  Nat Methods       Date:  2012-06-28       Impact factor: 28.547

2.  Multi-resolution open-top light-sheet microscopy to enable efficient 3D pathology workflows.

Authors:  Lindsey A Barner; Adam K Glaser; Hongyi Huang; Lawrence D True; Jonathan T C Liu
Journal:  Biomed Opt Express       Date:  2020-10-22       Impact factor: 3.732

3.  csiLSFM combines light-sheet fluorescence microscopy and coherent structured illumination for a lateral resolution below 100 nm.

Authors:  Bo-Jui Chang; Victor Didier Perez Meza; Ernst H K Stelzer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-24       Impact factor: 11.205

4.  Light Sheet-based Fluorescence Microscopy of Living or Fixed and Stained Tribolium castaneum Embryos.

Authors:  Frederic Strobl; Selina Klees; Ernst H K Stelzer
Journal:  J Vis Exp       Date:  2017-04-28       Impact factor: 1.355

5.  Assessing the imaging performance of light sheet microscopies in highly scattering tissues.

Authors:  A K Glaser; Y Wang; J T C Liu
Journal:  Biomed Opt Express       Date:  2016-01-14       Impact factor: 3.732

6.  Live imaging of Tribolium castaneum embryonic development using light-sheet-based fluorescence microscopy.

Authors:  Frederic Strobl; Alexander Schmitz; Ernst H K Stelzer
Journal:  Nat Protoc       Date:  2015-09-03       Impact factor: 13.491

Review 7.  The importance of geometry in mathematical models of developing systems.

Authors:  David M Umulis; Hans G Othmer
Journal:  Curr Opin Genet Dev       Date:  2012-10-27       Impact factor: 5.578

8.  In vivo imaging of zebrafish embryogenesis.

Authors:  Philipp J Keller
Journal:  Methods       Date:  2013-03-21       Impact factor: 3.608

9.  Light microscopy applications in systems biology: opportunities and challenges.

Authors:  Paul Michel Aloyse Antony; Christophe Trefois; Aleksandar Stojanovic; Aidos Sagatovich Baumuratov; Karol Kozak
Journal:  Cell Commun Signal       Date:  2013-04-11       Impact factor: 5.712

10.  Fast segmentation of stained nuclei in terabyte-scale, time resolved 3D microscopy image stacks.

Authors:  Johannes Stegmaier; Jens C Otte; Andrei Kobitski; Andreas Bartschat; Ariel Garcia; G Ulrich Nienhaus; Uwe Strähle; Ralf Mikut
Journal:  PLoS One       Date:  2014-02-27       Impact factor: 3.240

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