Literature DB >> 21966242

Kinetics of Hole Nucleation in Biomembrane Rupture.

Evan Evans1, Benjamin A Smith.   

Abstract

The core component of a biological membrane is a fluid-lipid bilayer held together by interfacial-hydrophobic and van der Waals interactions, which are balanced for the most part by acyl chain entropy confinement. If biomembranes are subjected to persistent tensions, an unstable (nanoscale) hole will emerge at some time to cause rupture. Because of the large energy required to create a hole, thermal activation appears to be requisite for initiating a hole and the activation energy is expected to depend significantly on mechanical tension. Although models exist for the kinetic process of hole nucleation in tense membranes, studies of membrane survival have failed to cover the ranges of tension and lifetime needed to critically examine nucleation theory. Hence, rupturing giant (~20 μm) membrane vesicles ultra-slowly to ultra-quickly with slow to fast ramps of tension, we demonstrate a method to directly quantify kinetic rates at which unstable holes form in fluid membranes, at the same time providing a range of kinetic rates from < 0.01 s(-1) to > 100 s(-1). Measuring lifetimes of many hundreds of vesicles, each tensed by precision control of micropipet suction, we have determined the rates of failure for vesicles made from several synthetic phospholipids plus 1:1 mixtures of phospho- and sphingo-lipids with cholesterol, all of which represent prominent constituents of eukaryotic cell membranes. Plotted on a logarithmic scale, the failure rates for vesicles are found to rise dramatically with increase of tension. Converting the experimental profiles of kinetic rates into changes of activation energy versus tension, we show that the results closely match expressions for thermal activation derived from a combination of meso-scale theory and molecular-scale simulations of hole formation. Moreover, we demonstrate a generic approach to transform analytical fits of activation energies obtained from rupture experiments into energy landscapes characterizing the process hole nucleation along the reaction coordinate defined by hole size.

Entities:  

Year:  2011        PMID: 21966242      PMCID: PMC3182099          DOI: 10.1088/1367-2630/13/9/095010

Source DB:  PubMed          Journal:  New J Phys        ISSN: 1367-2630            Impact factor:   3.729


  14 in total

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2.  Cascades of transient pores in giant vesicles: line tension and transport.

Authors:  Erdem Karatekin; Olivier Sandre; Hicham Guitouni; Nicolas Borghi; Pierre-Henri Puech; Françoise Brochard-Wyart
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3.  Nucleation free energy of pore formation in an amphiphilic bilayer studied by molecular dynamics simulations.

Authors:  T V Tolpekina; W K den Otter; W J Briels
Journal:  J Chem Phys       Date:  2004-12-15       Impact factor: 3.488

4.  Free energy of a trans-membrane pore calculated from atomistic molecular dynamics simulations.

Authors:  J Wohlert; W K den Otter; O Edholm; W J Briels
Journal:  J Chem Phys       Date:  2006-04-21       Impact factor: 3.488

5.  Reversible electrical breakdown of lipid bilayers: formation and evolution of pores.

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Journal:  Biochim Biophys Acta       Date:  1988-05-24

6.  Tension-stabilized pores in giant vesicles: determination of pore size and pore line tension.

Authors:  D V Zhelev; D Needham
Journal:  Biochim Biophys Acta       Date:  1993-04-08

7.  Elastic deformation and failure of lipid bilayer membranes containing cholesterol.

Authors:  D Needham; R S Nunn
Journal:  Biophys J       Date:  1990-10       Impact factor: 4.033

8.  Effect of chain length and unsaturation on elasticity of lipid bilayers.

Authors:  W Rawicz; K C Olbrich; T McIntosh; D Needham; E Evans
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

9.  A systematically coarse-grained solvent-free model for quantitative phospholipid bilayer simulations.

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Journal:  J Phys Chem B       Date:  2010-09-02       Impact factor: 2.991

10.  Elasticity, strength, and water permeability of bilayers that contain raft microdomain-forming lipids.

Authors:  W Rawicz; B A Smith; T J McIntosh; S A Simon; E Evans
Journal:  Biophys J       Date:  2008-03-13       Impact factor: 4.033

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  21 in total

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2.  Effects of electrically-induced constant tension on giant unilamellar vesicles using irreversible electroporation.

Authors:  Mohammad Abu Sayem Karal; Md Kabir Ahamed; Mostafizur Rahman; Marzuk Ahmed; Md Mostofa Shakil; Khondkar Siddique-E-Rabbani
Journal:  Eur Biophys J       Date:  2019-09-24       Impact factor: 1.733

3.  Spontaneous and Stress-Induced Pore Formation in Membranes: Theory, Experiments and Simulations.

Authors:  Edel Cunill-Semanat; Jesús Salgado
Journal:  J Membr Biol       Date:  2019-07-30       Impact factor: 1.843

4.  Pulsatile Lipid Vesicles under Osmotic Stress.

Authors:  Morgan Chabanon; James C S Ho; Bo Liedberg; Atul N Parikh; Padmini Rangamani
Journal:  Biophys J       Date:  2017-04-25       Impact factor: 4.033

5.  Low energy cost for optimal speed and control of membrane fusion.

Authors:  Claire François-Martin; James E Rothman; Frederic Pincet
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-23       Impact factor: 11.205

6.  Experimental Estimation of Membrane Tension Induced by Osmotic Pressure.

Authors:  Sayed Ul Alam Shibly; Chiranjib Ghatak; Mohammad Abu Sayem Karal; Md Moniruzzaman; Masahito Yamazaki
Journal:  Biophys J       Date:  2016-11-15       Impact factor: 4.033

7.  Effect of membrane potential on entry of lactoferricin B-derived 6-residue antimicrobial peptide into single Escherichia coli cells and lipid vesicles.

Authors:  Farzana Hossain; Hideo Dohra; Masahito Yamazaki
Journal:  J Bacteriol       Date:  2021-02-08       Impact factor: 3.490

8.  Role of Membrane Potential on Entry of Cell-Penetrating Peptide Transportan 10 into Single Vesicles.

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Review 9.  The role of membrane tension in the action of antimicrobial peptides and cell-penetrating peptides in biomembranes.

Authors:  Moynul Hasan; Md Mizanur Rahman Moghal; Samiron Kumar Saha; Masahito Yamazaki
Journal:  Biophys Rev       Date:  2019-05-15

10.  An investigation into the critical tension of electroporation in anionic lipid vesicles.

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Journal:  Eur Biophys J       Date:  2020-11-27       Impact factor: 1.733

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