Literature DB >> 31363808

Spontaneous and Stress-Induced Pore Formation in Membranes: Theory, Experiments and Simulations.

Edel Cunill-Semanat1, Jesús Salgado2.   

Abstract

The large plasticity, dynamics and adaptability of biological membranes allow different modes of intrinsic and inducible permeability. These phenomena are of physiological importance for a number of natural functions related to cell death and can also be manipulated artificially for practical purposes like gene transfer, drug delivery, prevention of infections or anticancer therapy. For these advances to develop in a controllable and specific way, we need a sufficient understanding of the membrane permeability phenomena. Since the formulation of early concepts of pore formation, there has been an enormous effort to describe membrane permeability by using theory, simulations and experiments. A major breakthrough has come recently through theoretical developments that allow building continuous trajectories of pore formation both in the absence and presence of stress conditions. The new model provides a coherent quantitative view of membrane permeabilization, useful to test the impact of known lipid properties, make predictions and postulate specific pore intermediates that can be studied by simulations. For example, this theory predicts unprecedented dependencies of the line tension on the pore radius and on applied lateral tension which explain previous puzzling results. In parallel, important concepts have also come from molecular dynamics simulations, of which the role of water for membrane permeabilization is of special interest. These advances open new challenges and perspectives for future progress in the study of membrane permeability, as experiments and simulations will need to test the theoretical predictions, while theory achieves new refinements that provide a physical ground for observations.

Entities:  

Keywords:  Electroporation; Lateral tension; Line tension; Lipid pore; Molecular dynamics simulations; Single GUV experiments

Mesh:

Substances:

Year:  2019        PMID: 31363808     DOI: 10.1007/s00232-019-00083-4

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  73 in total

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Journal:  J Am Chem Soc       Date:  2001-09-05       Impact factor: 15.419

2.  Simulation of pore formation in lipid bilayers by mechanical stress and electric fields.

Authors:  D Peter Tieleman; Hari Leontiadou; Alan E Mark; Siewert-Jan Marrink
Journal:  J Am Chem Soc       Date:  2003-05-28       Impact factor: 15.419

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Authors:  S Jonathan Singer
Journal:  Annu Rev Physiol       Date:  2004       Impact factor: 19.318

Review 4.  Defect-mediated trafficking across cell membranes: insights from in silico modeling.

Authors:  Andrey A Gurtovenko; Jamshed Anwar; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2010-10-13       Impact factor: 60.622

5.  Life cycle of an electropore: field-dependent and field-independent steps in pore creation and annihilation.

Authors:  Zachary A Levine; P Thomas Vernier
Journal:  J Membr Biol       Date:  2010-07-11       Impact factor: 1.843

6.  Free energy of a trans-membrane pore calculated from atomistic molecular dynamics simulations.

Authors:  J Wohlert; W K den Otter; O Edholm; W J Briels
Journal:  J Chem Phys       Date:  2006-04-21       Impact factor: 3.488

7.  Atomistic simulations of pore formation and closure in lipid bilayers.

Authors:  W F Drew Bennett; Nicolas Sapay; D Peter Tieleman
Journal:  Biophys J       Date:  2014-01-07       Impact factor: 4.033

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Authors:  A D Bangham; M M Standish; J C Watkins
Journal:  J Mol Biol       Date:  1965-08       Impact factor: 5.469

9.  Tension-stabilized pores in giant vesicles: determination of pore size and pore line tension.

Authors:  D V Zhelev; D Needham
Journal:  Biochim Biophys Acta       Date:  1993-04-08

10.  Correlating antimicrobial activity and model membrane leakage induced by nylon-3 polymers and detergents.

Authors:  Sara G Hovakeemian; Runhui Liu; Samuel H Gellman; Heiko Heerklotz
Journal:  Soft Matter       Date:  2015-08-03       Impact factor: 3.679

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  5 in total

1.  Special Issue: Membrane and Receptor Dynamics.

Authors:  Shikha Prakash; Durba Sengupta
Journal:  J Membr Biol       Date:  2019-10       Impact factor: 1.843

2.  Cholesterol promotes clustering of PI(4,5)P2 driving unconventional secretion of FGF2.

Authors:  Fabio Lolicato; Roberto Saleppico; Alessandra Griffo; Annalena Meyer; Federica Scollo; Bianca Pokrandt; Hans-Michael Müller; Helge Ewers; Hendrik Hähl; Jean-Baptiste Fleury; Ralf Seemann; Martin Hof; Britta Brügger; Karin Jacobs; Ilpo Vattulainen; Walter Nickel
Journal:  J Cell Biol       Date:  2022-09-29       Impact factor: 8.077

Review 3.  Recent developments in the kinetics of ruptures of giant vesicles under constant tension.

Authors:  Mohammad Abu Sayem Karal; Md Kabir Ahamed; Marzuk Ahmed; Zaid Bin Mahbub
Journal:  RSC Adv       Date:  2021-09-02       Impact factor: 4.036

4.  Propidium uptake and ATP release in A549 cells share similar transport mechanisms.

Authors:  Francis Boudreault; Ju Jing Tan; Ryszard Grygorczyk
Journal:  Biophys J       Date:  2022-04-06       Impact factor: 3.699

5.  Cholesterol: Enhancing FGF2 translocation in unconventional secretion.

Authors:  Haodong Wang; Min Zhang; Liang Ge
Journal:  J Cell Biol       Date:  2022-10-18       Impact factor: 8.077

  5 in total

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