Literature DB >> 21952539

The genome of the plant growth-promoting rhizobacterium Paenibacillus polymyxa M-1 contains nine sites dedicated to nonribosomal synthesis of lipopeptides and polyketides.

Ben Niu1, Christian Rueckert, Jochen Blom, Qi Wang, Rainer Borriss.   

Abstract

The genome of Paenibacillus polymyxa M-1 consisted of a 5.8-Mb chromosome and a 360-kb plasmid. Nine sites were dedicated to nonribosomal synthesis of lipopeptides and polyketides. Eight of them were located at the chromosome, while one gene cluster predicted to encode an unknown secondary metabolite was present on the plasmid.

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Year:  2011        PMID： 21952539      PMCID： PMC3187208          DOI： 10.1128/JB.05806-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  29 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  Polymyxin b: controlled biosynthesis.

Authors:  L Withander; H Heding
Journal:  J Antibiot (Tokyo)       Date:  1976-07       Impact factor: 2.649

3.  Polymyxin E, a new peptide antibiotic.

Authors:  W L Parker; M L Rathnum; L D Dean; M W Nimeck; W E Brown; E Meyers
Journal:  J Antibiot (Tokyo)       Date:  1977-09       Impact factor: 2.649

4.  A new antibiotic, gatavalin. I. Isolation and characterization.

Authors:  N Nakajima; S Chihara; Y Koyama
Journal:  J Antibiot (Tokyo)       Date:  1972-04       Impact factor: 2.649

5.  Polymyxin P, new antibiotics of polymyxin group.

Authors:  Y Kimura; E Murai; M Fujisawa; T Tatsuki; F Nobue
Journal:  J Antibiot (Tokyo)       Date:  1969-09       Impact factor: 2.649

6.  Jokipeptin, a new peptide antibiotic. I. Isolation, physico-chemical and biological characteristics.

Authors:  M Ito; Y Koyama
Journal:  J Antibiot (Tokyo)       Date:  1972-05       Impact factor: 2.649

7.  Isolation and structural characterization of colistin components.

Authors:  J A Orwa; C Govaerts; R Busson; E Roets; A Van Schepdael; J Hoogmartens
Journal:  J Antibiot (Tokyo)       Date:  2001-07       Impact factor: 2.649

8.  Paenibacillus polymyxa produces fusaricidin-type antifungal antibiotics active against Leptosphaeria maculans, the causative agent of blackleg disease of canola.

Authors:  Perrin H Beatty; Susan E Jensen
Journal:  Can J Microbiol       Date:  2002-02       Impact factor: 2.419

9.  Genome sequence of the polymyxin-producing plant-probiotic rhizobacterium Paenibacillus polymyxa E681.

Authors:  Jihyun F Kim; Haeyoung Jeong; Soo-Young Park; Seong-Bin Kim; Yon Kyoung Park; Soo-Keun Choi; Choong-Min Ryu; Cheol-Goo Hur; Sa-Youl Ghim; Tae Kwang Oh; Jae Jong Kim; Chang Seuk Park; Seung-Hwan Park
Journal:  J Bacteriol       Date:  2010-09-17       Impact factor: 3.490

10.  Isolation, structural characterization, and properties of mattacin (polymyxin M), a cyclic peptide antibiotic produced by Paenibacillus kobensis M.

Authors:  Nathaniel I Martin; Haijing Hu; Matthew M Moake; John J Churey; Randy Whittal; Randy W Worobo; John C Vederas
Journal:  J Biol Chem       Date:  2003-02-04       Impact factor: 5.157
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  25 in total

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Authors:  Steven D Brown; Sagar M Utturkar; Dawn M Klingeman; Courtney M Johnson; Stanton L Martin; Miriam L Land; Tse-Yuan S Lu; Christopher W Schadt; Mitchel J Doktycz; Dale A Pelletier
Journal:  J Bacteriol       Date:  2012-11       Impact factor: 3.490

2.  Characterization of Novel Fusaricidins Produced by Paenibacillus polymyxa-M1 Using MALDI-TOF Mass Spectrometry.

Authors:  Joachim Vater; Ben Niu; Kristin Dietel; Rainer Borriss
Journal:  J Am Soc Mass Spectrom       Date:  2015-06-23       Impact factor: 3.109

3.  Paenibacillus polymyxa Associated with the Stingless Bee Melipona scutellaris Produces Antimicrobial Compounds against Entomopathogens.

Authors:  Carla Menegatti; Weilan Gomes Da Paixão Melo; Daniel Blascke Carrão; Anderson Rodrigo Moraes De Oliveira; Fabio Santos Do Nascimento; Norberto Peporine Lopes; Mônica Tallarico Pupo
Journal:  J Chem Ecol       Date:  2018-10-23       Impact factor: 2.626

4.  Draft genome sequence of Paenibacillus polymyxa OSY-DF, which coproduces a lantibiotic, paenibacillin, and polymyxin E1.

Authors:  En Huang; Ahmed E Yousef
Journal:  J Bacteriol       Date:  2012-09       Impact factor: 3.490

5.  MALDI-FTICR MS imaging as a powerful tool to identify Paenibacillus antibiotics involved in the inhibition of plant pathogens.

Authors:  Delphine Debois; Marc Ongena; Hélène Cawoy; Edwin De Pauw
Journal:  J Am Soc Mass Spectrom       Date:  2013-05-01       Impact factor: 3.109

6.  Pan-genome analysis of Paenibacillus polymyxa strains reveals the mechanism of plant growth promotion and biocontrol.

Authors:  Liangliang Zhou; Ting Zhang; Shan Tang; Xueqin Fu; Shuijing Yu
Journal:  Antonie Van Leeuwenhoek       Date:  2020-08-20       Impact factor: 2.271

7.  A Simplified Method for Gene Knockout and Direct Screening of Recombinant Clones for Application in Paenibacillus polymyxa.

Authors:  Seong-Bin Kim; Salme Timmusk
Journal:  PLoS One       Date:  2013-06-27       Impact factor: 3.240

8.  Lipopeptides as main ingredients for inhibition of fungal phytopathogens by Bacillus subtilis/amyloliquefaciens.

Authors:  Hélène Cawoy; Delphine Debois; Laurent Franzil; Edwin De Pauw; Philippe Thonart; Marc Ongena
Journal:  Microb Biotechnol       Date:  2014-12-19       Impact factor: 5.813

9.  Precursor Amino Acids Inhibit Polymyxin E Biosynthesis in Paenibacillus polymyxa, Probably by Affecting the Expression of Polymyxin E Biosynthesis-Associated Genes.

Authors:  Zhiliang Yu; Chenglin Guo; Juanping Qiu
Journal:  Biomed Res Int       Date:  2015-05-21       Impact factor: 3.411

10.  Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park.

Authors:  David A Mead; Susan Lucas; Alex Copeland; Alla Lapidus; Jan-Feng Cheng; David C Bruce; Lynne A Goodwin; Sam Pitluck; Olga Chertkov; Xiaojing Zhang; John C Detter; Cliff S Han; Roxanne Tapia; Miriam Land; Loren J Hauser; Yun-Juan Chang; Nikos C Kyrpides; Natalia N Ivanova; Galina Ovchinnikova; Tanja Woyke; Catherine Brumm; Rebecca Hochstein; Thomas Schoenfeld; Phillip Brumm
Journal:  Stand Genomic Sci       Date:  2012-07-27
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