Literature DB >> 21941122

Transcriptional activators enhance polyadenylation of mRNA precursors.

Takashi Nagaike1, James L Manley.   

Abstract

3' processing of mRNA precursors is frequently coupled to transcription by RNA polymerase II (RNAP II). This coupling is well known to involve the C-terminal domain of the RNAP II largest subunit, but a variety of other transcription-associated factors have also been suggested to mediate coupling. Our recent studies have provided direct evidence that transcriptional activators can enhance the efficiency of transcription-coupled 3' processing. In this point-of-view, we discuss the mechanisms that underlie coupling, and their implications for control of alternative polyadenylation, which is emerging as a significant regulator of cell growth control.

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Year:  2011        PMID: 21941122      PMCID: PMC3256420          DOI: 10.4161/rna.8.6.17210

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  48 in total

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Authors:  Y Hirose; J L Manley
Journal:  Genes Dev       Date:  2000-06-15       Impact factor: 11.361

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Authors:  E J Cho; M S Kobor; M Kim; J Greenblatt; S Buratowski
Journal:  Genes Dev       Date:  2001-12-15       Impact factor: 11.361

3.  Transcription termination by nuclear RNA polymerases.

Authors:  Patricia Richard; James L Manley
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4.  Molecular architecture of the human pre-mRNA 3' processing complex.

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Journal:  Mol Cell       Date:  2009-02-13       Impact factor: 17.970

5.  A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity.

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Journal:  Cell Stem Cell       Date:  2009-04-02       Impact factor: 24.633

6.  Progressive lengthening of 3' untranslated regions of mRNAs by alternative polyadenylation during mouse embryonic development.

Authors:  Zhe Ji; Ju Youn Lee; Zhenhua Pan; Bingjun Jiang; Bin Tian
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-16       Impact factor: 11.205

7.  Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells.

Authors:  Christine Mayr; David P Bartel
Journal:  Cell       Date:  2009-08-21       Impact factor: 41.582

8.  The tumor suppressor Cdc73 functionally associates with CPSF and CstF 3' mRNA processing factors.

Authors:  Orit Rozenblatt-Rosen; Takashi Nagaike; Joshua M Francis; Syuzo Kaneko; Karen A Glatt; Christina M Hughes; Thomas LaFramboise; James L Manley; Matthew Meyerson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-09       Impact factor: 11.205

9.  Transcription elongation factor ELL2 directs immunoglobulin secretion in plasma cells by stimulating altered RNA processing.

Authors:  Kathleen Martincic; Serkan A Alkan; Alys Cheatle; Lisa Borghesi; Christine Milcarek
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10.  HITS-CLIP yields genome-wide insights into brain alternative RNA processing.

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Journal:  Nature       Date:  2008-11-02       Impact factor: 49.962

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  8 in total

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Journal:  Nucleus       Date:  2014-10-31       Impact factor: 4.197

Review 2.  The RNA polymerase II CTD coordinates transcription and RNA processing.

Authors:  Jing-Ping Hsin; James L Manley
Journal:  Genes Dev       Date:  2012-10-01       Impact factor: 11.361

3.  Threonine-4 of the budding yeast RNAP II CTD couples transcription with Htz1-mediated chromatin remodeling.

Authors:  Emanuel Rosonina; Nathan Yurko; Wencheng Li; Mainul Hoque; Bin Tian; James L Manley
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-28       Impact factor: 11.205

Review 4.  Noncoding RNA and its associated proteins as regulatory elements of the immune system.

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Journal:  Nat Immunol       Date:  2014-06       Impact factor: 25.606

5.  Epitope-tagged yeast strains reveal promoter driven changes to 3'-end formation and convergent antisense-transcription from common 3' UTRs.

Authors:  Angavai Swaminathan; Traude H Beilharz
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6.  Overexpressed HSF1 cancer signature genes cluster in human chromosome 8q.

Authors:  Christopher Q Zhang; Heinric Williams; Thomas L Prince; Eric S Ho
Journal:  Hum Genomics       Date:  2017-12-21       Impact factor: 4.639

7.  CPEB2 Is Necessary for Proper Porcine Meiotic Maturation and Embryonic Development.

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Journal:  Int J Mol Sci       Date:  2018-10-12       Impact factor: 5.923

Review 8.  Specificity factors in cytoplasmic polyadenylation.

Authors:  Amanda Charlesworth; Hedda A Meijer; Cornelia H de Moor
Journal:  Wiley Interdiscip Rev RNA       Date:  2013 Jul-Aug       Impact factor: 9.957

  8 in total

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