Literature DB >> 21937342

Incompressible deformation estimation algorithm (IDEA) from tagged MR images.

Xiaofeng Liu1, Khaled Z Abd-Elmoniem, Maureen Stone, Emi Z Murano, Jiachen Zhuo, Rao P Gullapalli, Jerry L Prince.   

Abstract

Measuring the 3D motion of muscular tissues, e.g., the heart or the tongue, using magnetic resonance (MR) tagging is typically carried out by interpolating the 2D motion information measured on orthogonal stacks of images. The incompressibility of muscle tissue is an important constraint on the reconstructed motion field and can significantly help to counter the sparsity and incompleteness of the available motion information. Previous methods utilizing this fact produced incompressible motions with limited accuracy. In this paper, we present an incompressible deformation estimation algorithm (IDEA) that reconstructs a dense representation of the 3D displacement field from tagged MR images and the estimated motion field is incompressible to high precision. At each imaged time frame, the tagged images are first processed to determine components of the displacement vector at each pixel relative to the reference time. IDEA then applies a smoothing, divergence-free, vector spline to interpolate velocity fields at intermediate discrete times such that the collection of velocity fields integrate over time to match the observed displacement components. Through this process, IDEA yields a dense estimate of a 3D displacement field that matches our observations and also corresponds to an incompressible motion. The method was validated with both numerical simulation and in vivo human experiments on the heart and the tongue.

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Mesh:

Year:  2011        PMID: 21937342      PMCID: PMC3683312          DOI: 10.1109/TMI.2011.2168825

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  48 in total

1.  Spatio-temporal tracking of myocardial deformations with a 4-D B-spline model from tagged MRI.

Authors:  J Huang; D Abendschein; V G Dávila-Román; A A Amini
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

2.  Description of the deformation of the left ventricle by a kinematic model.

Authors:  T Arts; W C Hunter; A Douglas; A M Muijtjens; R S Reneman
Journal:  J Biomech       Date:  1992-10       Impact factor: 2.712

3.  DENSE: displacement encoding with stimulated echoes in cardiac functional MRI.

Authors:  A H Aletras; S Ding; R S Balaban; H Wen
Journal:  J Magn Reson       Date:  1999-03       Impact factor: 2.229

4.  Fast tracking of cardiac motion using 3D-HARP.

Authors:  Li Pan; Jerry L Prince; João A C Lima; Nael F Osman
Journal:  IEEE Trans Biomed Eng       Date:  2005-08       Impact factor: 4.538

5.  Extended harmonic phase tracking of myocardial motion: improved coverage of myocardium and its effect on strain results.

Authors:  Sandra R R Tecelão; Jaco J M Zwanenburg; Joost P A Kuijer; J Tim Marcus
Journal:  J Magn Reson Imaging       Date:  2006-05       Impact factor: 4.813

Review 6.  Anatomical basis of lingual hydrostatic deformation.

Authors:  Richard J Gilbert; Vitaly J Napadow; Terry A Gaige; Van J Wedeen
Journal:  J Exp Biol       Date:  2007-12       Impact factor: 3.312

7.  Estimating Motion From MRI Data.

Authors:  Cengizhan Ozturk; J Andrew Derbyshire; Elliot R McVeigh
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2003-10       Impact factor: 10.961

8.  Three-dimensional myocardial deformations: calculation with displacement field fitting to tagged MR images.

Authors:  W G O'Dell; C C Moore; W C Hunter; E A Zerhouni; E R McVeigh
Journal:  Radiology       Date:  1995-06       Impact factor: 11.105

9.  Shortest path refinement for motion estimation from tagged MR images.

Authors:  Xiaofeng Liu; Jerry L Prince
Journal:  IEEE Trans Med Imaging       Date:  2010-03-18       Impact factor: 10.048

10.  Automated 3D motion tracking using Gabor filter bank, robust point matching, and deformable models.

Authors:  Ting Chen; Xiaoxu Wang; Sohae Chung; Dimitris Metaxas; Leon Axel
Journal:  IEEE Trans Med Imaging       Date:  2009-04-14       Impact factor: 10.048

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  18 in total

1.  Tissue-point motion tracking in the tongue from cine MRI and tagged MRI.

Authors:  Jonghye Woo; Maureen Stone; Yuanming Suo; Emi Z Murano; Jerry L Prince
Journal:  J Speech Lang Hear Res       Date:  2014-04-01       Impact factor: 2.297

2.  Semi-automatic segmentation for 3D motion analysis of the tongue with dynamic MRI.

Authors:  Junghoon Lee; Jonghye Woo; Fangxu Xing; Emi Z Murano; Maureen Stone; Jerry L Prince
Journal:  Comput Med Imaging Graph       Date:  2014-08-01       Impact factor: 4.790

3.  Atlas-Based Tongue Muscle Correlation Analysis From Tagged and High-Resolution Magnetic Resonance Imaging.

Authors:  Fangxu Xing; Maureen Stone; Tessa Goldsmith; Jerry L Prince; Georges El Fakhri; Jonghye Woo
Journal:  J Speech Lang Hear Res       Date:  2019-07-02       Impact factor: 2.297

4.  Strain Map of the Tongue in Normal and ALS Speech Patterns from Tagged and Diffusion MRI.

Authors:  Fangxu Xing; Jerry L Prince; Maureen Stone; Timothy G Reese; Nazem Atassi; Van J Wedeen; Georges El Fakhri; Jonghye Woo
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03-02

5.  Variability in muscle activation of simple speech motions: A biomechanical modeling approach.

Authors:  Negar M Harandi; Jonghye Woo; Maureen Stone; Rafeef Abugharbieh; Sidney Fels
Journal:  J Acoust Soc Am       Date:  2017-04       Impact factor: 1.840

6.  3D tongue motion from tagged and cine MR images.

Authors:  Fangxu Xing; Jonghye Woo; Emi Z Murano; Junghoon Lee; Maureen Stone; Jerry L Prince
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

7.  SEMI-AUTOMATIC SEGMENTATION OF THE TONGUE FOR 3D MOTION ANALYSIS WITH DYNAMIC MRI.

Authors:  Junghoon Lee; Jonghye Woo; Fangxu Xing; Emi Z Murano; Maureen Stone; Jerry L Prince
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2013-12-31

8.  MRI ANALYSIS OF 3D NORMAL AND POST-GLOSSECTOMY TONGUE MOTION IN SPEECH.

Authors:  Fangxu Xing; Emi Z Murano; Junghoon Lee; Jonghye Woo; Maureen Stone; Jerry L Prince
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2013-12-31

9.  Phase Vector Incompressible Registration Algorithm for Motion Estimation From Tagged Magnetic Resonance Images.

Authors:  Fangxu Xing; Jonghye Woo; Arnold D Gomez; Dzung L Pham; Philip V Bayly; Maureen Stone; Jerry L Prince
Journal:  IEEE Trans Med Imaging       Date:  2017-07-04       Impact factor: 10.048

10.  A robust and accurate center-frequency estimation (RACE) algorithm for improving motion estimation performance of SinMod on tagged cardiac MR images without known tagging parameters.

Authors:  Hong Liu; Jie Wang; Xiangyang Xu; Enmin Song; Qian Wang; Renchao Jin; Chih-Cheng Hung; Baowei Fei
Journal:  Magn Reson Imaging       Date:  2014-08-01       Impact factor: 2.546

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