Literature DB >> 21929364

A TALE of two nucleases: gene targeting for the masses?

Karl J Clark1, Daniel F Voytas, Stephen C Ekker.   

Abstract

Genome editing appears poised to enter an exciting new era. Targeted double-stranded breaks due to custom restriction enzymes are powerful nucleating events for the induction of local changes in the genome. The zinc finger nuclease (ZFN) platform established the potential of this approach for the zebrafish, but access to high quality reagents has been a major bottleneck for the field. However, two groups recently report successful somatic and germline gene modification using a new nuclease architecture, transcription activator-like effector nucleases (TALENs). TALEN construction is simpler, potentially more reliable, and in the few cases examined, shows fewer off-target effects than corresponding ZFNs. TALENs promise to bring gene targeting to the majority of zebrafish laboratories.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21929364      PMCID: PMC3174730          DOI: 10.1089/zeb.2011.9993

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  17 in total

1.  A simple cipher governs DNA recognition by TAL effectors.

Authors:  Matthew J Moscou; Adam J Bogdanove
Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

Review 2.  Forward and reverse genetic approaches for the analysis of vertebrate development in the zebrafish.

Authors:  Nathan D Lawson; Scot A Wolfe
Journal:  Dev Cell       Date:  2011-07-19       Impact factor: 12.270

3.  Breaking the code of DNA binding specificity of TAL-type III effectors.

Authors:  Jens Boch; Heidi Scholze; Sebastian Schornack; Angelika Landgraf; Simone Hahn; Sabine Kay; Thomas Lahaye; Anja Nickstadt; Ulla Bonas
Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

4.  Zinc finger protein-dependent and -independent contributions to the in vivo off-target activity of zinc finger nucleases.

Authors:  Ankit Gupta; Xiangdong Meng; Lihua J Zhu; Nathan D Lawson; Scot A Wolfe
Journal:  Nucleic Acids Res       Date:  2010-09-14       Impact factor: 16.971

5.  Assembly of custom TALE-type DNA binding domains by modular cloning.

Authors:  Robert Morbitzer; Janett Elsaesser; Jens Hausner; Thomas Lahaye
Journal:  Nucleic Acids Res       Date:  2011-03-18       Impact factor: 16.971

6.  Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting.

Authors:  Tomas Cermak; Erin L Doyle; Michelle Christian; Li Wang; Yong Zhang; Clarice Schmidt; Joshua A Baller; Nikunj V Somia; Adam J Bogdanove; Daniel F Voytas
Journal:  Nucleic Acids Res       Date:  2011-04-14       Impact factor: 16.971

7.  Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription.

Authors:  Feng Zhang; Le Cong; Simona Lodato; Sriram Kosuri; George M Church; Paola Arlotta
Journal:  Nat Biotechnol       Date:  2011-01-19       Impact factor: 54.908

8.  A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity.

Authors:  Claudio Mussolino; Robert Morbitzer; Fabienne Lütge; Nadine Dannemann; Thomas Lahaye; Toni Cathomen
Journal:  Nucleic Acids Res       Date:  2011-08-03       Impact factor: 16.971

9.  Rapid mutation of endogenous zebrafish genes using zinc finger nucleases made by Oligomerized Pool ENgineering (OPEN).

Authors:  Jonathan E Foley; Jing-Ruey J Yeh; Morgan L Maeder; Deepak Reyon; Jeffry D Sander; Randall T Peterson; J Keith Joung
Journal:  PLoS One       Date:  2009-02-09       Impact factor: 3.240

10.  Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases.

Authors:  Yannick Doyon; Jasmine M McCammon; Jeffrey C Miller; Farhoud Faraji; Catherine Ngo; George E Katibah; Rainier Amora; Toby D Hocking; Lei Zhang; Edward J Rebar; Philip D Gregory; Fyodor D Urnov; Sharon L Amacher
Journal:  Nat Biotechnol       Date:  2008-05-25       Impact factor: 54.908

View more
  32 in total

Review 1.  Zebrafish models of human liver development and disease.

Authors:  Benjamin J Wilkins; Michael Pack
Journal:  Compr Physiol       Date:  2013-07       Impact factor: 9.090

2.  Technical advances in the generation of transgenic animals and in their applications. Nantes, France, June 7th 2013.

Authors:  Séverine Ménoret; Laurent Tesson; Séverine Rémy; Reynald Thinard; Claire Usal; Laure-Hélène Ouisse; Virginie Thepenier; Ignacio Anegon
Journal:  Transgenic Res       Date:  2013-08-02       Impact factor: 2.788

3.  Manipulating galectin expression in zebrafish (Danio rerio).

Authors:  Chiguang Feng; Mihai Nita-Lazar; Nuria González-Montalbán; Jingyu Wang; Justin Mancini; Chinnarajan Ravindran; Hafiz Ahmed; Gerardo R Vasta
Journal:  Methods Mol Biol       Date:  2015

4.  The Critical Role of the Cytoskeleton in the Pathogenesis of Giardia.

Authors:  Christopher Nosala; Scott C Dawson
Journal:  Curr Clin Microbiol Rep       Date:  2015-10-08

Review 5.  Zebrafish as an emerging model for studying complex brain disorders.

Authors:  Allan V Kalueff; Adam Michael Stewart; Robert Gerlai
Journal:  Trends Pharmacol Sci       Date:  2014-01-09       Impact factor: 14.819

6.  The necessity for in vivo functional analysis in human medical genetics.

Authors:  Anita M Quintana
Journal:  Med Res Arch       Date:  2015-11

7.  Nuclease-mediated double-strand break (DSB) enhancement of small fragment homologous recombination (SFHR) gene modification in human-induced pluripotent stem cells (hiPSCs).

Authors:  R Geoffrey Sargent; Shingo Suzuki; Dieter C Gruenert
Journal:  Methods Mol Biol       Date:  2014

Review 8.  TAL effectors: function, structure, engineering and applications.

Authors:  Amanda Nga-Sze Mak; Philip Bradley; Adam J Bogdanove; Barry L Stoddard
Journal:  Curr Opin Struct Biol       Date:  2012-12-22       Impact factor: 6.809

9.  Activities and specificities of homodimeric TALENs in Saccharomyces cerevisiae.

Authors:  Mustapha Aouida; Marek J Piatek; Dhinoth K Bangarusamy; Magdy M Mahfouz
Journal:  Curr Genet       Date:  2013-10-01       Impact factor: 3.886

10.  Changing the Scale and Efficiency of Chemical Warfare Countermeasure Discovery Using the Zebrafish.

Authors:  Randall T Peterson; Calum A Macrae
Journal:  Drug Discov Today Dis Models       Date:  2013
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.