Literature DB >> 23265998

TAL effectors: function, structure, engineering and applications.

Amanda Nga-Sze Mak1, Philip Bradley, Adam J Bogdanove, Barry L Stoddard.   

Abstract

TAL effectors are proteins secreted by bacterial pathogens into plant cells, where they enter the nucleus and activate expression of individual genes. TAL effectors display a modular architecture that includes a central DNA-binding region comprising a tandem array of nearly identical repeats that are almost all 34 residues long. Residue number 13 in each TAL repeat (one of two consecutive polymorphic amino acids that are termed 'repeat variable diresidues', or 'RVDs') specifies the identity of a single base; collectively the sequential repeats and their RVDs dictate the recognition of sequential bases along one of the two DNA strands. The modular architecture of TAL effectors has facilitated their extremely rapid development and application as artificial gene targeting reagents, particularly in the form of site-specific nucleases. Recent crystallographic and biochemical analyses of TAL effectors have established the structural basis of their DNA recognition properties and provide clear directions for future research.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23265998      PMCID: PMC3572262          DOI: 10.1016/j.sbi.2012.11.001

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  51 in total

1.  The C terminus of AvrXa10 can be replaced by the transcriptional activation domain of VP16 from the herpes simplex virus.

Authors:  W Zhu; B Yang; N Wills; L B Johnson; F F White
Journal:  Plant Cell       Date:  1999-09       Impact factor: 11.277

2.  Identification of a family of avirulence genes from Xanthomonas oryzae pv. oryzae.

Authors:  C M Hopkins; F F White; S H Choi; A Guo; J E Leach
Journal:  Mol Plant Microbe Interact       Date:  1992 Nov-Dec       Impact factor: 4.171

3.  Avoidance of host recognition by alterations in the repetitive and C-terminal regions of AvrXa7, a type III effector of Xanthomonas oryzae pv. oryzae.

Authors:  Bing Yang; Akiko Sugio; Frank F White
Journal:  Mol Plant Microbe Interact       Date:  2005-02       Impact factor: 4.171

4.  The rice bacterial blight resistance gene xa5 encodes a novel form of disease resistance.

Authors:  Anjali S Iyer; Susan R McCouch
Journal:  Mol Plant Microbe Interact       Date:  2004-12       Impact factor: 4.171

5.  R gene expression induced by a type-III effector triggers disease resistance in rice.

Authors:  Keyu Gu; Bing Yang; Dongsheng Tian; Lifang Wu; Dongjiang Wang; Chellamma Sreekala; Fan Yang; Zhaoqing Chu; Guo-Liang Wang; Frank F White; Zhongchao Yin
Journal:  Nature       Date:  2005-06-23       Impact factor: 49.962

6.  AvrXa10 contains an acidic transcriptional activation domain in the functionally conserved C terminus.

Authors:  W Zhu; B Yang; J M Chittoor; L B Johnson; F F White
Journal:  Mol Plant Microbe Interact       Date:  1998-08       Impact factor: 4.171

7.  Recognition of the bacterial avirulence protein AvrBs3 occurs inside the host plant cell.

Authors:  G Van den Ackerveken; E Marois; U Bonas
Journal:  Cell       Date:  1996-12-27       Impact factor: 41.582

8.  Xanthomonas avirulence/pathogenicity gene family encodes functional plant nuclear targeting signals.

Authors:  Y Yang; D W Gabriel
Journal:  Mol Plant Microbe Interact       Date:  1995 Jul-Aug       Impact factor: 4.171

9.  Gene-for-genes interactions between cotton R genes and Xanthomonas campestris pv. malvacearum avr genes.

Authors:  R De Feyter; Y Yang; D W Gabriel
Journal:  Mol Plant Microbe Interact       Date:  1993 Mar-Apr       Impact factor: 4.171

10.  An Xanthomonas citri pathogenicity gene, pthA, pleiotropically encodes gratuitous avirulence on nonhosts.

Authors:  S Swarup; Y Yang; M T Kingsley; D W Gabriel
Journal:  Mol Plant Microbe Interact       Date:  1992 May-Jun       Impact factor: 4.171

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  35 in total

1.  Pluripotent and somatic stem cells: from basic science to utilization in disease modeling and therapeutic application. Meeting report on the 7th International Meeting of the Stem Cell Network North Rhine Westphalia.

Authors:  Stefan Radtke; Peter A Horn
Journal:  Cell Reprogram       Date:  2013-09-10       Impact factor: 1.987

Review 2.  Application of TALEs, CRISPR/Cas and sRNAs as trans-acting regulators in prokaryotes.

Authors:  Matthew F Copeland; Mark C Politz; Brian F Pfleger
Journal:  Curr Opin Biotechnol       Date:  2014-03-12       Impact factor: 9.740

3.  Consensus design of a NOD receptor leucine rich repeat domain with binding affinity for a muramyl dipeptide, a bacterial cell wall fragment.

Authors:  Rachael Parker; Ana Mercedes-Camacho; Tijana Z Grove
Journal:  Protein Sci       Date:  2014-04-17       Impact factor: 6.725

Review 4.  Type II restriction endonucleases--a historical perspective and more.

Authors:  Alfred Pingoud; Geoffrey G Wilson; Wolfgang Wende
Journal:  Nucleic Acids Res       Date:  2014-05-30       Impact factor: 16.971

5.  Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.

Authors:  Abigail R Lambert; Jazmine P Hallinan; Betty W Shen; Jennifer K Chik; Jill M Bolduc; Nadia Kulshina; Lori I Robins; Brett K Kaiser; Jordan Jarjour; Kyle Havens; Andrew M Scharenberg; Barry L Stoddard
Journal:  Structure       Date:  2016-04-28       Impact factor: 5.006

Review 6.  New and TALENted genome engineering toolbox.

Authors:  Jarryd M Campbell; Katherine A Hartjes; Timothy J Nelson; Xiaolei Xu; Stephen C Ekker
Journal:  Circ Res       Date:  2013-08-16       Impact factor: 17.367

7.  Divalent cations promote TALE DNA-binding specificity.

Authors:  Luke Cuculis; Chuankai Zhao; Zhanar Abil; Huimin Zhao; Diwakar Shukla; Charles M Schroeder
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

Review 8.  On the front line: structural insights into plant-pathogen interactions.

Authors:  Lennart Wirthmueller; Abbas Maqbool; Mark J Banfield
Journal:  Nat Rev Microbiol       Date:  2013-10-08       Impact factor: 60.633

9.  TAL effectors and activation of predicted host targets distinguish Asian from African strains of the rice pathogen Xanthomonas oryzae pv. oryzicola while strict conservation suggests universal importance of five TAL effectors.

Authors:  Katherine E Wilkins; Nicholas J Booher; Li Wang; Adam J Bogdanove
Journal:  Front Plant Sci       Date:  2015-07-21       Impact factor: 5.753

Review 10.  MorTAL Kombat: the story of defense against TAL effectors through loss-of-susceptibility.

Authors:  Mathilde Hutin; Alvaro L Pérez-Quintero; Camilo Lopez; Boris Szurek
Journal:  Front Plant Sci       Date:  2015-07-14       Impact factor: 5.753

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