Literature DB >> 21926394

The emerging genetics of primary ciliary dyskinesia.

Maimoona A Zariwala1, Heymut Omran, Thomas W Ferkol.   

Abstract

Primary ciliary dyskinesia (PCD) is an autosomal recessive, rare, genetically heterogeneous condition characterized by oto-sino-pulmonary disease together with situs abnormalities (Kartagener syndrome) owing to abnormal ciliary structure and function. Most patients are currently diagnosed with PCD based on the presence of defective ciliary ultrastructure. However, diagnosis often remains challenging due to variability in the clinical phenotype and ciliary ultrastructural changes. Some patients with PCD have normal ciliary ultrastructure, which further confounds the diagnosis. A genetic test for PCD exists but is of limited value because it investigates only a limited number of mutations in only two genes. The genetics of PCD is complicated owing to the complexity of axonemal structure that is highly conserved through evolution, which is comprised of multiple proteins. Identifying a PCD-causing gene is challenging due to locus and allelic heterogeneity. Despite genetic heterogeneity, multiple tools have been used, and there are 11 known PCD-causing genes. All of these genes combined explain approximately 50% of PCD cases; hence, more genes need to be identified. This review briefly describes the current knowledge regarding the genetics of PCD and focuses on the methodologies used to identify novel PCD-causing genes, including a candidate gene approach using model organisms, next-generation massively parallel sequencing techniques, and the use of genetically isolated populations. In conclusion, we demonstrate the multipronged approach that is necessary to circumvent challenges due to genetic heterogeneity to uncover genetic causes of PCD.

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Year:  2011        PMID: 21926394      PMCID: PMC3209577          DOI: 10.1513/pats.201103-023SD

Source DB:  PubMed          Journal:  Proc Am Thorac Soc        ISSN: 1546-3222


  24 in total

1.  Primary ciliary dyskinesia in Amish communities.

Authors:  Hauw Lie; Maimoona A Zariwala; Cynthia Helms; Anne M Bowcock; John L Carson; David E Brown; Milan J Hazucha; James Forsen; David Molter; Michael R Knowles; Margaret W Leigh; Thomas W Ferkol
Journal:  J Pediatr       Date:  2010-03-29       Impact factor: 4.406

2.  High prevalence of primary ciliary dyskinesia in a British Asian population.

Authors:  C O'Callaghan; P Chetcuti; E Moya
Journal:  Arch Dis Child       Date:  2009-08-30       Impact factor: 3.791

Review 3.  Sequencing technologies - the next generation.

Authors:  Michael L Metzker
Journal:  Nat Rev Genet       Date:  2009-12-08       Impact factor: 53.242

4.  DNAI2 mutations cause primary ciliary dyskinesia with defects in the outer dynein arm.

Authors:  Niki Tomas Loges; Heike Olbrich; Lale Fenske; Huda Mussaffi; Judit Horvath; Manfred Fliegauf; Heiner Kuhl; Gyorgy Baktai; Erzsebet Peterffy; Rahul Chodhari; Eddie M K Chung; Andrew Rutman; Christopher O'Callaghan; Hannah Blau; Laszlo Tiszlavicz; Katarzyna Voelkel; Michal Witt; Ewa Zietkiewicz; Juergen Neesen; Richard Reinhardt; Hannah M Mitchison; Heymut Omran
Journal:  Am J Hum Genet       Date:  2008-10-23       Impact factor: 11.025

5.  Deletions and point mutations of LRRC50 cause primary ciliary dyskinesia due to dynein arm defects.

Authors:  Niki Tomas Loges; Heike Olbrich; Anita Becker-Heck; Karsten Häffner; Angelina Heer; Christina Reinhard; Miriam Schmidts; Andreas Kispert; Maimoona A Zariwala; Margaret W Leigh; Michael R Knowles; Hanswalter Zentgraf; Horst Seithe; Gudrun Nürnberg; Peter Nürnberg; Richard Reinhardt; Heymut Omran
Journal:  Am J Hum Genet       Date:  2009-12       Impact factor: 11.025

6.  Loss-of-function mutations in the human ortholog of Chlamydomonas reinhardtii ODA7 disrupt dynein arm assembly and cause primary ciliary dyskinesia.

Authors:  Philippe Duquesnoy; Estelle Escudier; Laetitia Vincensini; Judy Freshour; Anne-Marie Bridoux; André Coste; Antoine Deschildre; Jacques de Blic; Marie Legendre; Guy Montantin; Henrique Tenreiro; Anne-Marie Vojtek; Céline Loussert; Annick Clément; Denise Escalier; Philippe Bastin; David R Mitchell; Serge Amselem
Journal:  Am J Hum Genet       Date:  2009-12       Impact factor: 11.025

7.  Congenital heart disease and other heterotaxic defects in a large cohort of patients with primary ciliary dyskinesia.

Authors:  Marcus P Kennedy; Heymut Omran; Margaret W Leigh; Sharon Dell; Lucy Morgan; Paul L Molina; Blair V Robinson; Susan L Minnix; Heike Olbrich; Thomas Severin; Peter Ahrens; Lars Lange; Hilda N Morillas; Peadar G Noone; Maimoona A Zariwala; Michael R Knowles
Journal:  Circulation       Date:  2007-05-21       Impact factor: 29.690

8.  The Chlamydomonas genome reveals the evolution of key animal and plant functions.

Authors:  Sabeeha S Merchant; Simon E Prochnik; Olivier Vallon; Elizabeth H Harris; Steven J Karpowicz; George B Witman; Astrid Terry; Asaf Salamov; Lillian K Fritz-Laylin; Laurence Maréchal-Drouard; Wallace F Marshall; Liang-Hu Qu; David R Nelson; Anton A Sanderfoot; Martin H Spalding; Vladimir V Kapitonov; Qinghu Ren; Patrick Ferris; Erika Lindquist; Harris Shapiro; Susan M Lucas; Jane Grimwood; Jeremy Schmutz; Pierre Cardol; Heriberto Cerutti; Guillaume Chanfreau; Chun-Long Chen; Valérie Cognat; Martin T Croft; Rachel Dent; Susan Dutcher; Emilio Fernández; Hideya Fukuzawa; David González-Ballester; Diego González-Halphen; Armin Hallmann; Marc Hanikenne; Michael Hippler; William Inwood; Kamel Jabbari; Ming Kalanon; Richard Kuras; Paul A Lefebvre; Stéphane D Lemaire; Alexey V Lobanov; Martin Lohr; Andrea Manuell; Iris Meier; Laurens Mets; Maria Mittag; Telsa Mittelmeier; James V Moroney; Jeffrey Moseley; Carolyn Napoli; Aurora M Nedelcu; Krishna Niyogi; Sergey V Novoselov; Ian T Paulsen; Greg Pazour; Saul Purton; Jean-Philippe Ral; Diego Mauricio Riaño-Pachón; Wayne Riekhof; Linda Rymarquis; Michael Schroda; David Stern; James Umen; Robert Willows; Nedra Wilson; Sara Lana Zimmer; Jens Allmer; Janneke Balk; Katerina Bisova; Chong-Jian Chen; Marek Elias; Karla Gendler; Charles Hauser; Mary Rose Lamb; Heidi Ledford; Joanne C Long; Jun Minagawa; M Dudley Page; Junmin Pan; Wirulda Pootakham; Sanja Roje; Annkatrin Rose; Eric Stahlberg; Aimee M Terauchi; Pinfen Yang; Steven Ball; Chris Bowler; Carol L Dieckmann; Vadim N Gladyshev; Pamela Green; Richard Jorgensen; Stephen Mayfield; Bernd Mueller-Roeber; Sathish Rajamani; Richard T Sayre; Peter Brokstein; Inna Dubchak; David Goodstein; Leila Hornick; Y Wayne Huang; Jinal Jhaveri; Yigong Luo; Diego Martínez; Wing Chi Abby Ngau; Bobby Otillar; Alexander Poliakov; Aaron Porter; Lukasz Szajkowski; Gregory Werner; Kemin Zhou; Igor V Grigoriev; Daniel S Rokhsar; Arthur R Grossman
Journal:  Science       Date:  2007-10-12       Impact factor: 47.728

Review 9.  Clinical and genetic aspects of primary ciliary dyskinesia/Kartagener syndrome.

Authors:  Margaret W Leigh; Jessica E Pittman; Johnny L Carson; Thomas W Ferkol; Sharon D Dell; Stephanie D Davis; Michael R Knowles; Maimoona A Zariwala
Journal:  Genet Med       Date:  2009-07       Impact factor: 8.822

10.  Mutations in radial spoke head protein genes RSPH9 and RSPH4A cause primary ciliary dyskinesia with central-microtubular-pair abnormalities.

Authors:  Victoria H Castleman; Leila Romio; Rahul Chodhari; Robert A Hirst; Sandra C P de Castro; Keith A Parker; Patricia Ybot-Gonzalez; Richard D Emes; Stephen W Wilson; Colin Wallis; Colin A Johnson; Rene J Herrera; Andrew Rutman; Mellisa Dixon; Amelia Shoemark; Andrew Bush; Claire Hogg; R Mark Gardiner; Orit Reish; Nicholas D E Greene; Christopher O'Callaghan; Saul Purton; Eddie M K Chung; Hannah M Mitchison
Journal:  Am J Hum Genet       Date:  2009-02-05       Impact factor: 11.025

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  43 in total

Review 1.  Genetics and biology of primary ciliary dyskinesia.

Authors:  Amjad Horani; Thomas W Ferkol; Susan K Dutcher; Steven L Brody
Journal:  Paediatr Respir Rev       Date:  2015-09-11       Impact factor: 2.726

2.  A novel mutation of DNAH5 in chronic rhinosinusitis and primary ciliary dyskinesia in a Chinese family.

Authors:  Jing Zhang; Liping Guan; Weiping Wen; Yu Lu; Qianyan Zhu; Huijun Yuan; Yulan Chen; Hongtian Wang; Jianguo Zhang; Huabin Li
Journal:  Eur Arch Otorhinolaryngol       Date:  2013-10-23       Impact factor: 2.503

3.  c21orf59/kurly Controls Both Cilia Motility and Polarization.

Authors:  Kimberly M Jaffe; Daniel T Grimes; Jodi Schottenfeld-Roames; Michael E Werner; Tse-Shuen J Ku; Sun K Kim; Jose L Pelliccia; Nicholas F C Morante; Brian J Mitchell; Rebecca D Burdine
Journal:  Cell Rep       Date:  2016-02-18       Impact factor: 9.423

4.  ATP4a is required for development and function of the Xenopus mucociliary epidermis - a potential model to study proton pump inhibitor-associated pneumonia.

Authors:  Peter Walentek; Tina Beyer; Cathrin Hagenlocher; Christina Müller; Kerstin Feistel; Axel Schweickert; Richard M Harland; Martin Blum
Journal:  Dev Biol       Date:  2015-04-04       Impact factor: 3.582

5.  Whole-exome capture and sequencing identifies HEATR2 mutation as a cause of primary ciliary dyskinesia.

Authors:  Amjad Horani; Todd E Druley; Maimoona A Zariwala; Anand C Patel; Benjamin T Levinson; Laura G Van Arendonk; Katherine C Thornton; Joe C Giacalone; Alison J Albee; Kate S Wilson; Emily H Turner; Deborah A Nickerson; Jay Shendure; Philip V Bayly; Margaret W Leigh; Michael R Knowles; Steven L Brody; Susan K Dutcher; Thomas W Ferkol
Journal:  Am J Hum Genet       Date:  2012-10-05       Impact factor: 11.025

6.  The ciliary inner dynein arm, I1 dynein, is assembled in the cytoplasm and transported by IFT before axonemal docking.

Authors:  Rasagnya Viswanadha; Emily L Hunter; Ryosuke Yamamoto; Maureen Wirschell; Lea M Alford; Susan K Dutcher; Winfield S Sale
Journal:  Cytoskeleton (Hoboken)       Date:  2014-10-30

Review 7.  What we can learn from a tadpole about ciliopathies and airway diseases: Using systems biology in Xenopus to study cilia and mucociliary epithelia.

Authors:  Peter Walentek; Ian K Quigley
Journal:  Genesis       Date:  2017-01       Impact factor: 2.487

8.  Zebrafish Ciliopathy Screen Plus Human Mutational Analysis Identifies C21orf59 and CCDC65 Defects as Causing Primary Ciliary Dyskinesia.

Authors:  Christina Austin-Tse; Jan Halbritter; Maimoona A Zariwala; Renée M Gilberti; Heon Yung Gee; Nathan Hellman; Narendra Pathak; Yan Liu; Jennifer R Panizzi; Ramila S Patel-King; Douglas Tritschler; Raqual Bower; Eileen O'Toole; Jonathan D Porath; Toby W Hurd; Moumita Chaki; Katrina A Diaz; Stefan Kohl; Svjetlana Lovric; Daw-Yang Hwang; Daniela A Braun; Markus Schueler; Rannar Airik; Edgar A Otto; Margaret W Leigh; Peadar G Noone; Johnny L Carson; Stephanie D Davis; Jessica E Pittman; Thomas W Ferkol; Jeffry J Atkinson; Kenneth N Olivier; Scott D Sagel; Sharon D Dell; Margaret Rosenfeld; Carlos E Milla; Niki T Loges; Heymut Omran; Mary E Porter; Stephen M King; Michael R Knowles; Iain A Drummond; Friedhelm Hildebrandt
Journal:  Am J Hum Genet       Date:  2013-10-03       Impact factor: 11.025

9.  Primary ciliary dyskinesia-causing mutations in Amish and Mennonite communities.

Authors:  Thomas W Ferkol; Erik G Puffenberger; Hauw Lie; Cynthia Helms; Kevin A Strauss; Anne Bowcock; John L Carson; Milan Hazucha; D Holmes Morton; Anand C Patel; Margaret W Leigh; Michael R Knowles; Maimoona A Zariwala
Journal:  J Pediatr       Date:  2013-03-07       Impact factor: 4.406

10.  Cilia gene mutations cause atrioventricular septal defects by multiple mechanisms.

Authors:  Ozanna Burnicka-Turek; Jeffrey D Steimle; Wenhui Huang; Lindsay Felker; Anna Kamp; Junghun Kweon; Michael Peterson; Roger H Reeves; Cheryl L Maslen; Peter J Gruber; Xinan H Yang; Jay Shendure; Ivan P Moskowitz
Journal:  Hum Mol Genet       Date:  2016-06-23       Impact factor: 6.150

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