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Literature DB >> 21922058

Prioritizing the repair of DNA damage that is encountered by RNA polymerase.

Abstract

Transcription-coupled DNA repair pathways enable lesions that block transcription to be repaired more quickly than similar lesions in other parts of the genome. Here I consider the recent progress that has been made in understanding how bacteria prioritize certain lesions for nucleotide excision repair.

Year: 2011 PMID： 21922058 PMCID： PMC3173683 DOI： 10.4161/trns.2.4.16146

Source DB: PubMed Journal: Transcription ISSN： 2154-1272

30 in total

1. Post-incision steps of nucleotide excision repair in Escherichia coli. Disassembly of the UvrBC-DNA complex by helicase II and DNA polymerase I.

Authors: D K Orren; C P Selby; J E Hearst; A Sancar
Journal: J Biol Chem Date: 1992-01-15 Impact factor: 5.157

2. Structural basis for transcription-coupled repair: the N terminus of Mfd resembles UvrB with degenerate ATPase motifs.

Authors: Nora Assenmacher; Katja Wenig; Alfred Lammens; Karl-Peter Hopfner
Journal: J Mol Biol Date: 2005-11-08 Impact factor: 5.469

3. Crystal structure of Bacillus stearothermophilus UvrA provides insight into ATP-modulated dimerization, UvrB interaction, and DNA binding.

Authors: Danaya Pakotiprapha; Yoshihiko Inuzuka; Brian R Bowman; Geri F Moolenaar; Nora Goosen; David Jeruzalmi; Gregory L Verdine
Journal: Mol Cell Date: 2007-12-27 Impact factor: 17.970

4. A structural model for the damage-sensing complex in bacterial nucleotide excision repair.

Authors: Danaya Pakotiprapha; Yi Liu; Gregory L Verdine; David Jeruzalmi
Journal: J Biol Chem Date: 2009-03-13 Impact factor: 5.157

5. Roles for the transcription elongation factor NusA in both DNA repair and damage tolerance pathways in Escherichia coli.

Authors: Susan E Cohen; Cindi A Lewis; Rachel A Mooney; Michael A Kohanski; James J Collins; Robert Landick; Graham C Walker
Journal: Proc Natl Acad Sci U S A Date: 2010-08-09 Impact factor: 11.205

6. The alkyltransferase-like ybaZ gene product enhances nucleotide excision repair of O(6)-alkylguanine adducts in E. coli.

Authors: Gerard Mazon; Gaëlle Philippin; Jean Cadet; Didier Gasparutto; Robert P Fuchs
Journal: DNA Repair (Amst) Date: 2009-03-09

Review 7. Transcription-coupled DNA repair: two decades of progress and surprises.

Authors: Philip C Hanawalt; Graciela Spivak
Journal: Nat Rev Mol Cell Biol Date: 2008-12 Impact factor: 94.444

8. The molecular mechanism of transcription-coupled DNA repair.

Authors: Nigel J Savery
Journal: Trends Microbiol Date: 2007-06-14 Impact factor: 17.079

9. Controlling the motor activity of a transcription-repair coupling factor: autoinhibition and the role of RNA polymerase.

Authors: Abigail J Smith; Mark D Szczelkun; Nigel J Savery
Journal: Nucleic Acids Res Date: 2007-02-28 Impact factor: 16.971

10. RNA polymerase mutants defective in the initiation of transcription-coupled DNA repair.

Authors: A J Smith; N J Savery
Journal: Nucleic Acids Res Date: 2005-02-01 Impact factor: 16.971

5 in total

1. Mfd as a central partner of transcription coupled repair.

Authors: Jordan Monnet; Wilfried Grange; Terence R Strick; Nicolas Joly
Journal: Transcription Date: 2013-05-16

2. UvrD facilitates DNA repair by pulling RNA polymerase backwards.

Authors: Vitaly Epshtein; Venu Kamarthapu; Katelyn McGary; Vladimir Svetlov; Beatrix Ueberheide; Sergey Proshkin; Alexander Mironov; Evgeny Nudler
Journal: Nature Date: 2014-01-08 Impact factor: 49.962

Review 3. Regulation of Transcript Elongation.

Authors: Georgiy A Belogurov; Irina Artsimovitch
Journal: Annu Rev Microbiol Date: 2015-06-24 Impact factor: 15.500

Review 4. Prokaryotic nucleotide excision repair.

Authors: Caroline Kisker; Jochen Kuper; Bennett Van Houten
Journal: Cold Spring Harb Perspect Biol Date: 2013-03-01 Impact factor: 10.005

5. Multipartite control of the DNA translocase, Mfd.

Authors: Abigail J Smith; Christian Pernstich; Nigel J Savery
Journal: Nucleic Acids Res Date: 2012-08-16 Impact factor: 16.971

5 in total