Literature DB >> 21917964

Solution properties of murine leukemia virus gag protein: differences from HIV-1 gag.

Siddhartha A K Datta1, Xiaobing Zuo, Patrick K Clark, Stephen J Campbell, Yun-Xing Wang, Alan Rein.   

Abstract

Immature retrovirus particles are assembled from the multidomain Gag protein. In these particles, the Gag proteins are arranged radially as elongated rods. We have previously characterized the properties of HIV-1 Gag in solution. In the absence of nucleic acid, HIV-1 Gag displays moderately weak interprotein interactions, existing in monomer-dimer equilibrium. Neutron scattering and hydrodynamic studies suggest that the protein is compact, and biochemical studies indicate that the two ends can approach close in three-dimensional space, implying the need for a significant conformational change during assembly. We now describe the properties of the Gag protein of Moloney murine leukemia virus (MLV), a gammaretrovirus. We found that this protein is very different from HIV-1 Gag: it has much weaker protein-protein interaction and is predominantly monomeric in solution. This has allowed us to study the protein by small-angle X-ray scattering and to build a low-resolution molecular envelope for the protein. We found that MLV Gag is extended in solution, with an axial ratio of ∼7, comparable to its dimensions in immature particles. Mutational analysis suggests that runs of prolines in its matrix and p12 domains and the highly charged stretch at the C terminus of its capsid domain all contribute to this extended conformation. These differences between MLV Gag and HIV-1 Gag and their implications for retroviral assembly are discussed.

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Year:  2011        PMID: 21917964      PMCID: PMC3209342          DOI: 10.1128/JVI.05889-11

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  53 in total

1.  RNA is a structural element in retrovirus particles.

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-24       Impact factor: 11.205

2.  Compactness of the denatured state of a fast-folding protein measured by submillisecond small-angle x-ray scattering.

Authors:  L Pollack; M W Tate; N C Darnton; J B Knight; S M Gruner; W A Eaton; R H Austin
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

3.  A survey of left-handed polyproline II helices.

Authors:  B J Stapley; T P Creamer
Journal:  Protein Sci       Date:  1999-03       Impact factor: 6.725

4.  Structures of the HIV-1 capsid protein dimerization domain at 2.6 A resolution.

Authors:  D K Worthylake; H Wang; S Yoo; W I Sundquist; C P Hill
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-01-01

5.  Modulation of HIV-like particle assembly in vitro by inositol phosphates.

Authors:  S Campbell; R J Fisher; E M Towler; S Fox; H J Issaq; T Wolfe; L R Phillips; A Rein
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-28       Impact factor: 11.205

6.  Image reconstructions of helical assemblies of the HIV-1 CA protein.

Authors:  S Li; C P Hill; W I Sundquist; J T Finch
Journal:  Nature       Date:  2000-09-21       Impact factor: 49.962

7.  Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing.

Authors:  D I Svergun
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

8.  Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling.

Authors:  P Schuck
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

9.  Mutations altering the moloney murine leukemia virus p12 Gag protein affect virion production and early events of the virus life cycle.

Authors:  B Yuan; X Li; S P Goff
Journal:  EMBO J       Date:  1999-09-01       Impact factor: 11.598

10.  Sequence-specific interaction between HIV-1 matrix protein and viral genomic RNA revealed by in vitro genetic selection.

Authors:  P Purohit; S Dupont; M Stevenson; M R Green
Journal:  RNA       Date:  2001-04       Impact factor: 4.942

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  16 in total

1.  In vitro assembly of virus-like particles of a gammaretrovirus, the murine leukemia virus XMRV.

Authors:  Romana Hadravová; Alex de Marco; Pavel Ulbrich; Jitka Stokrová; Michal Dolezal; Iva Pichová; Tomás Ruml; John A G Briggs; Michaela Rumlová
Journal:  J Virol       Date:  2011-11-16       Impact factor: 5.103

2.  Membrane Binding of the Rous Sarcoma Virus Gag Protein Is Cooperative and Dependent on the Spacer Peptide Assembly Domain.

Authors:  Robert A Dick; Marilia Barros; Danni Jin; Mathias Lösche; Volker M Vogt
Journal:  J Virol       Date:  2015-12-16       Impact factor: 5.103

3.  Nucleic Acid Binding by Mason-Pfizer Monkey Virus CA Promotes Virus Assembly and Genome Packaging.

Authors:  Tibor Füzik; Růžena Píchalová; Florian K M Schur; Karolína Strohalmová; Ivana Křížová; Romana Hadravová; Michaela Rumlová; John A G Briggs; Pavel Ulbrich; Tomáš Ruml
Journal:  J Virol       Date:  2016-04-14       Impact factor: 5.103

4.  Higher-order structure of the Rous sarcoma virus SP assembly domain.

Authors:  Di L Bush; Eric B Monroe; Gregory J Bedwell; Peter E Prevelige; Judith M Phillips; Volker M Vogt
Journal:  J Virol       Date:  2014-03-05       Impact factor: 5.103

5.  Solution Conformation of Bovine Leukemia Virus Gag Suggests an Elongated Structure.

Authors:  Dominic F Qualley; Sarah E Cooper; James L Ross; Erik D Olson; William A Cantara; Karin Musier-Forsyth
Journal:  J Mol Biol       Date:  2019-02-04       Impact factor: 5.469

6.  A non-cleavable hexahistidine affinity tag at the carboxyl-terminus of the HIV-1 Pr55Gag polyprotein alters nucleic acid binding properties.

Authors:  Maria C Bewley; Lisa Reinhart; Matthew S Stake; Shorena Nadaraia-Hoke; Leslie J Parent; John M Flanagan
Journal:  Protein Expr Purif       Date:  2016-10-06       Impact factor: 1.650

Review 7.  Retroviral Gag protein-RNA interactions: Implications for specific genomic RNA packaging and virion assembly.

Authors:  Erik D Olson; Karin Musier-Forsyth
Journal:  Semin Cell Dev Biol       Date:  2018-04-01       Impact factor: 7.727

8.  Hydrodynamic and Membrane Binding Properties of Purified Rous Sarcoma Virus Gag Protein.

Authors:  Robert A Dick; Siddhartha A K Datta; Hirsh Nanda; Xianyang Fang; Yi Wen; Marilia Barros; Yun-Xing Wang; Alan Rein; Volker M Vogt
Journal:  J Virol       Date:  2015-08-05       Impact factor: 5.103

9.  Structural Determinants of Virion Assembly and Release in the C Terminus of the Mason-Pfizer Monkey Virus Capsid Protein.

Authors:  Marlene V Buckmaster; Kaneil K Zadrozny; Barbie K Ganser-Pornillos; Owen Pornillos; Stephen P Goff
Journal:  J Virol       Date:  2021-07-21       Impact factor: 5.103

10.  Cholesterol depletion inactivates XMRV and leads to viral envelope protein release from virions: evidence for role of cholesterol in XMRV infection.

Authors:  Yuyang Tang; Alvin George; Thyneice Taylor; James E K Hildreth
Journal:  PLoS One       Date:  2012-10-26       Impact factor: 3.240

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