Literature DB >> 21912923

Theory of excitonic couplings in dielectric media : foundation of Poisson-TrEsp method and application to photosystem I trimers.

Thomas Renger1, Frank Müh.   

Abstract

The Poisson-TrEsp method (where TrEsp stands for transition charges from electrostatic potentials) has been successfully applied to calculate excitonic couplings in a variety of pigment-protein complexes. It relies on an isomorphism that allows for relating the excitonic coupling between transition densities in dielectric media to their Coulomb coupling. This isomorphism was derived by Hsu et al. (J. Chem. Phys. 114, 3065, (2001)) using time-dependent density functional response theory. In this article, we provide an alternative and simple derivation by first-order perturbation theory. An application of Poisson-TrEsp to photosystem I trimers reveals that the local field correction/screening factor depends on the mutual orientation of the pigments and on the dielectric boundaries rather than on distance. A mean correction factor of f = 0.69 is determined for this system.

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Year:  2011        PMID: 21912923     DOI: 10.1007/s11120-011-9685-6

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  12 in total

1.  Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.

Authors:  P Jordan; P Fromme; H T Witt; O Klukas; W Saenger; N Krauss
Journal:  Nature       Date:  2001-06-21       Impact factor: 49.962

2.  Dipole strengths in the chlorophylls.

Authors:  Robert S Knox; Bryan Q Spring
Journal:  Photochem Photobiol       Date:  2003-05       Impact factor: 3.421

3.  Electronic Energy Transfer in Condensed Phase Studied by a Polarizable QM/MM Model.

Authors:  Carles Curutchet; Aurora Muñoz-Losa; Susanna Monti; Jacob Kongsted; Gregory D Scholes; Benedetta Mennucci
Journal:  J Chem Theory Comput       Date:  2009-06-04       Impact factor: 6.006

4.  Intermolecular coulomb couplings from ab initio electrostatic potentials: application to optical transitions of strongly coupled pigments in photosynthetic antennae and reaction centers.

Authors:  M E Madjet; A Abdurahman; T Renger
Journal:  J Phys Chem B       Date:  2006-08-31       Impact factor: 2.991

5.  How solvent controls electronic energy transfer and light harvesting.

Authors:  Gregory D Scholes; Carles Curutchet; Benedetta Mennucci; Roberto Cammi; Jacopo Tomasi
Journal:  J Phys Chem B       Date:  2007-06-06       Impact factor: 2.991

6.  Structure-based calculations of optical spectra of photosystem I suggest an asymmetric light-harvesting process.

Authors:  Julian Adolphs; Frank Müh; Mohamed El-Amine Madjet; Marcel Schmidt am Busch; Thomas Renger
Journal:  J Am Chem Soc       Date:  2010-03-17       Impact factor: 15.419

7.  Theory of solvatochromic shifts in nonpolar solvents reveals a new spectroscopic rule.

Authors:  Thomas Renger; Bernhard Grundkötter; Mohamed El-Amine Madjet; Frank Müh
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-29       Impact factor: 11.205

8.  The role of the environment in electronic energy transfer: a molecular modeling perspective.

Authors:  Benedetta Mennucci; Carles Curutchet
Journal:  Phys Chem Chem Phys       Date:  2011-05-19       Impact factor: 3.676

9.  Extinction coefficients and critical solubilisation concentrations of photosystems I and II from Thermosynechococcus elongatus.

Authors:  Frank Müh; Athina Zouni
Journal:  Biochim Biophys Acta       Date:  2005-04-01

10.  Thermally activated superradiance and intersystem crossing in the water-soluble chlorophyll binding protein.

Authors:  T Renger; M E Madjet; F Müh; I Trostmann; F-J Schmitt; C Theiss; H Paulsen; H J Eichler; A Knorr; G Renger
Journal:  J Phys Chem B       Date:  2009-07-23       Impact factor: 2.991

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  9 in total

Review 1.  Structure-based modeling of energy transfer in photosynthesis.

Authors:  Thomas Renger; Mohamed El-Amine Madjet; Marcel Schmidt am Busch; Julian Adolphs; Frank Müh
Journal:  Photosynth Res       Date:  2013-08-07       Impact factor: 3.573

Review 2.  Recent progress in atomistic modeling of light-harvesting complexes: a mini review.

Authors:  Sayan Maity; Ulrich Kleinekathöfer
Journal:  Photosynth Res       Date:  2022-10-07       Impact factor: 3.429

3.  Normal mode analysis of the spectral density of the Fenna-Matthews-Olson light-harvesting protein: how the protein dissipates the excess energy of excitons.

Authors:  Thomas Renger; Alexander Klinger; Florian Steinecker; Marcel Schmidt am Busch; Jorge Numata; Frank Müh
Journal:  J Phys Chem B       Date:  2012-12-10       Impact factor: 2.991

4.  Structure Prediction of Self-Assembled Dye Aggregates from Cryogenic Transmission Electron Microscopy, Molecular Mechanics, and Theory of Optical Spectra.

Authors:  Christian Friedl; Thomas Renger; Hans V Berlepsch; Kai Ludwig; Marcel Schmidt Am Busch; Jörg Megow
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2016-08-03       Impact factor: 4.126

5.  Theory of FRET "Spectroscopic Ruler" for Short Distances: Application to Polyproline.

Authors:  Ekaterina Sobakinskaya; Marcel Schmidt Am Busch; Thomas Renger
Journal:  J Phys Chem B       Date:  2017-12-22       Impact factor: 2.991

6.  Quantum Chemical Modeling of the Photoinduced Activity of Multichromophoric Biosystems.

Authors:  Francesco Segatta; Lorenzo Cupellini; Marco Garavelli; Benedetta Mennucci
Journal:  Chem Rev       Date:  2019-07-05       Impact factor: 60.622

7.  Anharmonic Molecular Motion Drives Resonance Energy Transfer in peri-Arylene Dyads.

Authors:  Vladislav Sláma; Václav Perlík; Heinz Langhals; Andreas Walter; Tomáš Mančal; Jürgen Hauer; František Šanda
Journal:  Front Chem       Date:  2020-11-23       Impact factor: 5.221

8.  Towards a quantitative description of excitonic couplings in photosynthetic pigment-protein complexes: quantum chemistry driven multiscale approaches.

Authors:  Christian Friedl; Dmitri G Fedorov; Thomas Renger
Journal:  Phys Chem Chem Phys       Date:  2022-02-23       Impact factor: 3.676

9.  Determination of FRET orientation factor between artificial fluorophore and photosynthetic light-harvesting 2 complex (LH2).

Authors:  Kazuhiro J Fujimoto; Tomoya Miyashita; Takehisa Dewa; Takeshi Yanai
Journal:  Sci Rep       Date:  2022-09-05       Impact factor: 4.996

  9 in total

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