Literature DB >> 21909082

A reversibly photoswitchable GFP-like protein with fluorescence excitation decoupled from switching.

Tanja Brakemann1, Andre C Stiel, Gert Weber, Martin Andresen, Ilaria Testa, Tim Grotjohann, Marcel Leutenegger, Uwe Plessmann, Henning Urlaub, Christian Eggeling, Markus C Wahl, Stefan W Hell, Stefan Jakobs.   

Abstract

Photoswitchable fluorescent proteins have enabled new approaches for imaging cells, but their utility has been limited either because they cannot be switched repeatedly or because the wavelengths for switching and fluorescence imaging are strictly coupled. We report a bright, monomeric, reversibly photoswitchable variant of GFP, Dreiklang, whose fluorescence excitation spectrum is decoupled from that for optical switching. Reversible on-and-off switching in living cells is accomplished at illumination wavelengths of ∼365 nm and ∼405 nm, respectively, whereas fluorescence is elicited at ∼515 nm. Mass spectrometry and high-resolution crystallographic analysis of the same protein crystal in the photoswitched on- and off-states demonstrate that switching is based on a reversible hydration/dehydration reaction that modifies the chromophore. The switching properties of Dreiklang enable far-field fluorescence nanoscopy in living mammalian cells using both a coordinate-targeted and a stochastic single molecule switching approach.

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Year:  2011        PMID: 21909082     DOI: 10.1038/nbt.1952

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  44 in total

Review 1.  Kinetic modelling approaches to in vivo imaging.

Authors:  R D Phair; T Misteli
Journal:  Nat Rev Mol Cell Biol       Date:  2001-12       Impact factor: 94.444

2.  PRODRG: a tool for high-throughput crystallography of protein-ligand complexes.

Authors:  Alexander W Schüttelkopf; Daan M F van Aalten
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-07-21

3.  1.8 A bright-state structure of the reversibly switchable fluorescent protein Dronpa guides the generation of fast switching variants.

Authors:  Andre C Stiel; Simon Trowitzsch; Gert Weber; Martin Andresen; Christian Eggeling; Stefan W Hell; Stefan Jakobs; Markus C Wahl
Journal:  Biochem J       Date:  2007-02-15       Impact factor: 3.857

4.  Structural basis for reversible photobleaching of a green fluorescent protein homologue.

Authors:  J Nathan Henderson; Hui-Wang Ai; Robert E Campbell; S James Remington
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-09       Impact factor: 11.205

5.  Generation of monomeric reversibly switchable red fluorescent proteins for far-field fluorescence nanoscopy.

Authors:  Andre C Stiel; Martin Andresen; Hannes Bock; Michael Hilbert; Jessica Schilde; Andreas Schönle; Christian Eggeling; Alexander Egner; Stefan W Hell; Stefan Jakobs
Journal:  Biophys J       Date:  2008-07-25       Impact factor: 4.033

6.  Microscopy and its focal switch.

Authors:  Stefan W Hell
Journal:  Nat Methods       Date:  2009-01       Impact factor: 28.547

7.  Reversible single-molecule photoswitching in the GFP-like fluorescent protein Dronpa.

Authors:  Satoshi Habuchi; Ryoko Ando; Peter Dedecker; Wendy Verheijen; Hideaki Mizuno; Atsushi Miyawaki; Johan Hofkens
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-22       Impact factor: 11.205

8.  Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications.

Authors:  O Griesbeck; G S Baird; R E Campbell; D A Zacharias; R Y Tsien
Journal:  J Biol Chem       Date:  2001-05-31       Impact factor: 5.157

9.  Photoactivatable mCherry for high-resolution two-color fluorescence microscopy.

Authors:  Fedor V Subach; George H Patterson; Suliana Manley; Jennifer M Gillette; Jennifer Lippincott-Schwartz; Vladislav V Verkhusha
Journal:  Nat Methods       Date:  2009-01-25       Impact factor: 28.547

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  78 in total

Review 1.  Diversity in genetic in vivo methods for protein-protein interaction studies: from the yeast two-hybrid system to the mammalian split-luciferase system.

Authors:  Bram Stynen; Hélène Tournu; Jan Tavernier; Patrick Van Dijck
Journal:  Microbiol Mol Biol Rev       Date:  2012-06       Impact factor: 11.056

Review 2.  Neuro at the Nanoscale: Diffraction-Unlimited Imaging with STED Nanoscopy.

Authors:  Jason B Castro; Travis J Gould
Journal:  J Histochem Cytochem       Date:  2015-09-21       Impact factor: 2.479

3.  Single-molecule evaluation of fluorescent protein photoactivation efficiency using an in vivo nanotemplate.

Authors:  Nela Durisic; Lara Laparra-Cuervo; Angel Sandoval-Álvarez; Joseph Steven Borbely; Melike Lakadamyali
Journal:  Nat Methods       Date:  2014-01-05       Impact factor: 28.547

Review 4.  Super-resolution localization microscopy with photoactivatable fluorescent marker proteins.

Authors:  Per Niklas Hedde; G Ulrich Nienhaus
Journal:  Protoplasma       Date:  2013-10-27       Impact factor: 3.356

5.  A fast- and positively photoswitchable fluorescent protein for ultralow-laser-power RESOLFT nanoscopy.

Authors:  Dhermendra K Tiwari; Yoshiyuki Arai; Masahito Yamanaka; Tomoki Matsuda; Masakazu Agetsuma; Masahiro Nakano; Katsumasa Fujita; Takeharu Nagai
Journal:  Nat Methods       Date:  2015-04-20       Impact factor: 28.547

6.  LED Thermo Flow - Combining Optogenetics with Flow Cytometry.

Authors:  Kathrin Brenker; Kerstin Osthof; Jianying Yang; Michael Reth
Journal:  J Vis Exp       Date:  2016-12-30       Impact factor: 1.355

Review 7.  Photostable and photoswitching fluorescent dyes for super-resolution imaging.

Authors:  Masafumi Minoshima; Kazuya Kikuchi
Journal:  J Biol Inorg Chem       Date:  2017-01-12       Impact factor: 3.358

8.  STAQ: A route toward low power, multicolor nanoscopy.

Authors:  Tilman Rosales; Dan L Sackett; Jianhua Xu; Zhen-Dan Shi; Biying Xu; Haitao Li; Gurpreet Kaur; Erin Frohart; Nalini Shenoy; Sarah M Cheal; Haitao Wu; Andrés E Dulcey; Yulin Hu; Changhui Li; Kelly Lane; Gary L Griffiths; Jay R Knutson
Journal:  Microsc Res Tech       Date:  2015-03-12       Impact factor: 2.769

Review 9.  Chromophore chemistry of fluorescent proteins controlled by light.

Authors:  Daria M Shcherbakova; Vladislav V Verkhusha
Journal:  Curr Opin Chem Biol       Date:  2014-05-13       Impact factor: 8.822

Review 10.  Light Microscopy of Mitochondria at the Nanoscale.

Authors:  Stefan Jakobs; Till Stephan; Peter Ilgen; Christian Brüser
Journal:  Annu Rev Biophys       Date:  2020-02-24       Impact factor: 12.981

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