Literature DB >> 21904977

The dual role of ubiquitin-like protein Urm1 as a protein modifier and sulfur carrier.

Fengbin Wang1, Meiruo Liu, Rui Qiu, Chaoneng Ji.   

Abstract

The ubiquitin-related modifier Urm1 can be covalently conjugated to lysine residues of other proteins, such as yeast Ahp1 and human MOCS3, through a mechanism involving the E1-like protein Uba4 (MOCS3 in humans). Similar to ubiquitination, urmylation requires a thioester intermediate and forms isopeptide bonds between Urm1 and its substrates. In addition, the urmylation process can be significantly enhanced by oxidative stress. Recent findings have demonstrated that Urm1 also acts as a sulfur carrier in the thiolation of eukaryotic tRNA via a mechanism that requires the formation of a thiocarboxylated Urm1. This role is very similar to that of prokaryotic sulfur carriers such as MoaD and ThiS. Evidence strongly supports the hypothesis that Urm1 is the molecular fossil in the evolutionary link between prokaryotic sulfur carriers and eukaryotic ubiquitin-like proteins. In the present review, we discuss the dual role of Urm1 in protein and tRNA modification.

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Year:  2011        PMID: 21904977      PMCID: PMC4875326          DOI: 10.1007/s13238-011-1074-6

Source DB:  PubMed          Journal:  Protein Cell        ISSN: 1674-800X            Impact factor:   14.870


  54 in total

1.  Attachment of the ubiquitin-related protein Urm1p to the antioxidant protein Ahp1p.

Authors:  April S Goehring; David M Rivers; George F Sprague
Journal:  Eukaryot Cell       Date:  2003-10

2.  Role of the ubiquitin-like protein Urm1 as a noncanonical lysine-directed protein modifier.

Authors:  Annemarthe G Van der Veen; Kenji Schorpp; Christian Schlieker; Ludovico Buti; Jadyn R Damon; Eric Spooner; Hidde L Ploegh; Stefan Jentsch
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-05       Impact factor: 11.205

3.  E1- and ubiquitin-like proteins provide a direct link between protein conjugation and sulfur transfer in archaea.

Authors:  Hugo V Miranda; Nikita Nembhard; Dan Su; Nathaniel Hepowit; David J Krause; Jonathan R Pritz; Cortlin Phillips; Dieter Söll; Julie A Maupin-Furlow
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-28       Impact factor: 11.205

4.  A new antioxidant with alkyl hydroperoxide defense properties in yeast.

Authors:  J Lee; D Spector; C Godon; J Labarre; M B Toledano
Journal:  J Biol Chem       Date:  1999-02-19       Impact factor: 5.157

5.  Thio-modification of yeast cytosolic tRNA requires a ubiquitin-related system that resembles bacterial sulfur transfer systems.

Authors:  Yumi Nakai; Masato Nakai; Hideyuki Hayashi
Journal:  J Biol Chem       Date:  2008-07-29       Impact factor: 5.157

Review 6.  Trafficking in persulfides: delivering sulfur in biosynthetic pathways.

Authors:  Eugene G Mueller
Journal:  Nat Chem Biol       Date:  2006-04       Impact factor: 15.040

Review 7.  CSE1L/CAS: its role in proliferation and apoptosis.

Authors:  P Behrens; U Brinkmann; A Wellmann
Journal:  Apoptosis       Date:  2003-01       Impact factor: 4.677

8.  The prokaryotic antecedents of the ubiquitin-signaling system and the early evolution of ubiquitin-like beta-grasp domains.

Authors:  Lakshminarayan M Iyer; A Maxwell Burroughs; L Aravind
Journal:  Genome Biol       Date:  2006       Impact factor: 13.583

9.  Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions.

Authors:  Akiko Noma; Yuriko Sakaguchi; Tsutomu Suzuki
Journal:  Nucleic Acids Res       Date:  2009-01-16       Impact factor: 16.971

10.  Kluyveromyces lactis gamma-toxin, a ribonuclease that recognizes the anticodon stem loop of tRNA.

Authors:  Jian Lu; Anders Esberg; Bo Huang; Anders S Byström
Journal:  Nucleic Acids Res       Date:  2007-12-20       Impact factor: 16.971

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  19 in total

Review 1.  The dispersed archaeal eukaryome and the complex archaeal ancestor of eukaryotes.

Authors:  Eugene V Koonin; Natalya Yutin
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-04-01       Impact factor: 10.005

Review 2.  Proteasomes and protein conjugation across domains of life.

Authors:  Julie Maupin-Furlow
Journal:  Nat Rev Microbiol       Date:  2011-12-19       Impact factor: 60.633

Review 3.  Ubiquitin-like proteins and their roles in archaea.

Authors:  Julie A Maupin-Furlow
Journal:  Trends Microbiol       Date:  2012-11-08       Impact factor: 17.079

4.  Urm1: an essential regulator of JNK signaling and oxidative stress in Drosophila melanogaster.

Authors:  B Khoshnood; I Dacklin; C Grabbe
Journal:  Cell Mol Life Sci       Date:  2015-12-29       Impact factor: 9.261

Review 5.  Post-translation modification in Archaea: lessons from Haloferax volcanii and other haloarchaea.

Authors:  Jerry Eichler; Julie Maupin-Furlow
Journal:  FEMS Microbiol Rev       Date:  2012-12-20       Impact factor: 16.408

6.  Archaeal ubiquitin-like SAMP3 is isopeptide-linked to proteins via a UbaA-dependent mechanism.

Authors:  Hugo V Miranda; Haike Antelmann; Nathaniel Hepowit; Nikita E Chavarria; David J Krause; Jonathan R Pritz; Katrin Bäsell; Dörte Becher; Matthew A Humbard; Luciano Brocchieri; Julie A Maupin-Furlow
Journal:  Mol Cell Proteomics       Date:  2013-10-04       Impact factor: 5.911

7.  Mechanistic insight into protein modification and sulfur mobilization activities of noncanonical E1 and associated ubiquitin-like proteins of Archaea.

Authors:  Nathaniel L Hepowit; Ian Mitchelle S de Vera; Shiyun Cao; Xian Fu; Yifei Wu; Sivakumar Uthandi; Nikita E Chavarria; Markus Englert; Dan Su; Dieter Sӧll; Douglas J Kojetin; Julie A Maupin-Furlow
Journal:  FEBS J       Date:  2016-10       Impact factor: 5.542

8.  Involvement of a eukaryotic-like ubiquitin-related modifier in the proteasome pathway of the archaeon Sulfolobus acidocaldarius.

Authors:  Rana S Anjum; Sian M Bray; John K Blackwood; Mairi L Kilkenny; Matthew A Coelho; Benjamin M Foster; Shurong Li; Julie A Howard; Luca Pellegrini; Sonja-Verena Albers; Michael J Deery; Nicholas P Robinson
Journal:  Nat Commun       Date:  2015-09-08       Impact factor: 14.919

Review 9.  Origin of eukaryotes from within archaea, archaeal eukaryome and bursts of gene gain: eukaryogenesis just made easier?

Authors:  Eugene V Koonin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-09-26       Impact factor: 6.237

10.  Ubiquitin-related modifiers of Arabidopsis thaliana influence root development.

Authors:  Florian John; Matthias Philipp; Ruth-Maria Leiber; Sanae Errafi; Christoph Ringli
Journal:  PLoS One       Date:  2014-01-22       Impact factor: 3.240

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