| Literature DB >> 21904541 |
Shu Yan1, Cui Zheng, Zhi-qi Chen, Rong Liu, Gui-gang Li, Wei-kun Hu, Han Pei, Bin Li.
Abstract
Recent reports show that ER stress plays an important role in diabetic retinopathy (DR), but ER stress is a complicated process involving a network of signaling pathways and hundreds of factors, What factors involved in DR are not yet understood. We selected 89 ER stress factors from more than 200, A rat diabetes model was established by intraperitoneal injection of streptozotocin (STZ). The expression of 89 ER stress-related factors was found in the retinas of diabetic rats, at both 1- and 3-months after development of diabetes, by quantitative real-time polymerase chain reaction arrays. There were significant changes in expression levels of 13 and 12 ER stress-related factors in the diabetic rat retinas in the first and third month after the development of diabetes, Based on the array results, homocysteine- inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1(HERP), and synoviolin(HRD1) were studied further by immunofluorescence and Western blot. Immunofluorescence and Western blot analyses showed that the expression of HERP was reduced in the retinas of diabetic rats in first and third month. The expression of Hrd1 did not change significantly in the retinas of diabetic rats in the first month but was reduced in the third month.Entities:
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Year: 2011 PMID: 21904541 PMCID: PMC3166715 DOI: 10.1155/2012/743780
Source DB: PubMed Journal: Exp Diabetes Res ISSN: 1687-5214
Figure 1Assessment of the expression of ER stress-related factors in diabetic retinas in the first and third months after the development of diabetes by Q-PCR arrays. (a) the histogram of the expression of different genes in 11 signaling pathways related to ER stress after the first month; (b) the histogram of the expression of different genes in 11 signaling pathways related to ER stress after the third month. Unfolded Protein Binding: UPB, ER Protein Folding Quality Control: ERPFQC, Regulation of Cholesterol Metabolism: RCM, ER-associated degradation: ERAD, Ubiquitination: Ub, Transcription Factors: TF, Protein Folding: PF, Protein Disulfide Isomerization: PDI, Heat Shock Proteins: HSP, Apoptosis: Ap°.
Q-PCR arrays showed that the expression of the ER stress factor had significant differences in the first and the third month in diabetic rat retina: the ER stress factor of significant differences belongs to different ER stress signaling pathways.
| Signaling pathway | First month | Third month |
|---|---|---|
| Unfolded protein binding |
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| ER protein folding quality control |
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| Regulation of cholesterol Metabolism |
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| Regulation of translation |
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| ERAD |
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| Ubiquitination |
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| Transcription factors |
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| Protein folding |
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| Protein disulfide isomerization |
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| Heat shock proteins |
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| Apoptosis |
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Q-PCR array gene table. We selected 89 ER stress-related factors, and other 6 genes as a quality control a total; of 96 genes were detected in Q-PCR arrays.
| A01 | Rn.107561 | XM_341644 | AMFR | Autocrine motility factor receptor |
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| A02 | Rn.161941 | NM_001108183 | ARMET | Arginine rich, mutated in early-stage tumors |
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| A03 | Rn.2423 | NM_024403 | ATF4 | Activating transcription factor 4 (tax-responsive enhancer element B67) |
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| A04 | Rn.222130 | NM_001107196 | ATF6 | Activating transcription factor 6 |
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| A05 | Rn.18179 | NM_001002809 | ATF6B | Activating transcription factor 6 beta |
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| A06 | Rn.42932 | NM_021702 | ATXN3 | Ataxin 3 |
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| A07 | Rn.10668 | NM_017059 | BAX | BCL2-associated X protein |
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| A08 | Rn.974 | NM_022399 | CALR | Calreticulin |
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| A09 | Rn.1762 | NM_172008.2 | CANX | Calnexin |
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| A10 | Rn.97889 | NM_182814.2 | CCT4 | Chaperonin containing TCP1, subunit 4 (delta) |
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| A11 | Rn.62267 | NM_001106603.1 | CCT7 | Chaperonin containing TCP1, subunit 7 (eta) |
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| A12 | Rn.6479 | NM_024125.4 | CEBPB | CCAAT/enhancer binding protein (C/EBP), beta |
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| B01 | Rn.104043 | NM_001013092.1 | CREB3 | CAMP responsive element binding protein 3 |
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| B02 | Rn.20059 | NM_001012115.1 | CREB3L3 | CAMP responsive element binding protein 3-like 3 |
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| B03 | Rn.11183 | NM_001109986 | DDIT3 | DNA-damage-inducible transcript 3 |
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| B04 | Rn.110990 | NM_001014202.1 | DERL1 | Der1-like domain family, member 1 |
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| B05 | Rn.11209 | NM_031627 | CHOP | Rattus norvegicus nuclear receptor subfamily 1, group H, member 3 |
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| B06 | Rn.40780 | NM_001109541 | DNAJB2 | DnaJ (Hsp40) homolog, subfamily B, member 2 |
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| B07 | Rn.29778 | NM_012699 | DNAJB9 | DnaJ (Hsp40) homolog, subfamily B, member 9 |
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| B08 | Rn.8642 | NM_001106486 | DNAJC10 | DnaJ (Hsp40) homolog, subfamily C, member 10 |
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| B09 | Rn.162234 | NM_022232 | DNAJC3 | DnaJ (Hsp40) homolog, subfamily C, member 3 |
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| B10 | Rn.91398 | NM_001013196 | DNAJC4 | DnaJ (Hsp40) homolog, subfamily C, member 4 |
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| B11 | Rn.107459 | NM_001033909 | Elf2 | E74-like factor 2 |
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| B12 | Rn.81078 | NM_130422 | Casp12 | Caspase 12 |
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| C01 | Rn.198593 | NM_001109339 | eIF2A | Eukaryotic translation initiation factor 2A, 65 kDa |
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| C02 | Rn.24897 | NM_031599 | EIF2AK3 | Eukaryotic translation initiation factor 2-alpha kinase 3 |
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| C03 | Rn.19198 | NM_001037208 | CRELD2 | cysteine-rich with EGF-like domains 2 |
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| C04 | Rn.218563 | XM_344959.3 | ERN2 | Endoplasmic reticulum to nucleus signaling 2 |
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| C05 | Rn.64648 | NM_138528 | ERO1L | ERO1-like ( |
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| C06 | Rn.22325 | NM_144755 | TRB3 | Tribbles homolog 3 |
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| C07 | Rn.2459 | NM_001008317 | ERP44 | Thioredoxin domain containing 4 (endoplasmic reticulum) |
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| C08 | Rn.57325 | NM_138917 | FBXO6 | F-box protein 6 |
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| C09 | Rn.99241 | NM_001106334 | GANAB | Glucosidase, alpha; neutral AB |
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| C10 | Rn.23744 | NM_001145840 | GANC | Glucosidase, alpha; neutral C |
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| C11 | Rn.4028 | NM_053523 | HERPUD1 | Homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 |
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| C12 | Rn.1950 | NM_212504 | HSPA1B | Heat shock 70 kDa protein 1B |
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| D01 | Rn.187184 | NM_212546 | HSPA1L | heat shock protein 1-like |
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| D02 | Rn.211303 | NM_021863 | HSPA2 | Heat shock protein 2 |
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| D03 | Rn.163092 | NM_153629 | HSPA4 | Heat shock protein 4 |
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| D04 | Rn.144829 | NM_001106428 | HSPA4L | Heat shock protein 4-like |
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| D05 | Rn.11088 | NM_013083 | HSPA5 | Heat shock 70 kDa protein 5 (glucose-regulated protein, 78 kDa) |
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| D06 | Rn.37805 | NM_001011901 | HSPH1 | Heat shock 105 kDa/110 kDa protein 1 |
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| D07 | Rn.107325 | NM_001106599 | HTRA2 | HtrA serine peptidase 2 |
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| D08 | Rn.163330 | NM_001107321 | HTRA4 | HtrA serine peptidase 4 |
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| D09 | Rn.772 | NM_022392 | INSIG1 | Insulin-induced gene 1 |
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| D10 | Rn.16736 | NM_178091 | INSIG2 | Insulin-induced gene 2 |
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| D11 | Rn.9911 | NM_012806 | MAPK10 | Mitogen-activated protein kinase 10 |
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| D12 | Rn.4090 | XM_001056513 | MAPK8 | Mitogen-activated protein kinase 8 |
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| E01 | Rn.9910 | NM_017322 | MAPK9 | Mitogen-activated protein kinase 9 |
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| E02 | Rn.2362 | NM_053569 | MBTPS1 | Membrane-bound transcription factor peptidase, site 1 |
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| E03 | Rn.212224 | NM_001035007 | MBTPS2 | Membrane-bound transcription factor peptidase, site 2 |
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| E04 | Rn.144645 | NM_080577 | NPLOC4 | Nuclear protein localization 4 homolog ( |
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| E05 | Rn.1492 | NM_053463 | NUCB1 | Nucleobindin 1 |
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| E06 | Rn.1579 | NM_001007265 | OS9 | Osteosarcoma amplified 9, endoplasmic reticulum associated protein |
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| E07 | Rn.11527 | NM_017319 | PDIA3 | Protein disulfide isomerase family A, member 3 |
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| E08 | Rn.7627 | NM_001109476 | PFDN2 | Prefoldin subunit 2 |
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| E09 | Rn.3401 | NM_001106794 | PFDN5 | Prefoldin subunit 5 |
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| E10 | Rn.1463 | NM_017101 | PPIA | Peptidylprolyl isomerase A (cyclophilin A) |
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| E11 | Rn.2232 | NM_133546 | PPP1R15A | Protein phosphatase 1, regulatory (inhibitor) subunit 15A |
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| E12 | Rn.104417 | NM_001106806 | PRKCSH | Protein kinase C substrate 80K-H |
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| F01 | Rn.209127 | NM_001127545 | RNF139 | Ring finger protein 139 |
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| F02 | Rn.209127 | NM_006913 | RNF5 | Ring finger protein 5 |
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| F03 | Rn.4224 | NM_013067 | RPN1 | Ribophorin I |
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| F04 | Rn.99548 | NM_001100966 | SCAP | SREBF chaperone |
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| F05 | Rn.98327 | NM_001034129 | SEC62 | SEC62 homolog ( |
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| F06 | Rn.24233 | NM_001107637 | SEC63 | SEC63 homolog ( |
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| F07 | Rn.20802 | NM_177933 | SEL1L | Sel-1 suppressor of lin-12-like ( |
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| F08 | Rn.4197 | NM_173120 | SELS | Selenoprotein S |
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| F09 | Rn.2119 | NM_030835 | SERP1 | Stress-associated endoplasmic reticulum protein 1 |
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| F10 | Rn.103851 | NM_199376 | SIL1 | SIL1 homolog, endoplasmic reticulum chaperone ( |
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| F11 | Rn.221929 | XM_001075680 | SREBF1 | Sterol regulatory element binding transcription factor 1 |
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| F12 | Rn.41063 | NM_001033694 | SREBF2 | Sterol regulatory element binding transcription factor 2 |
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| G01 | Rn.162486 | NM_001100739 | SYVN1 | Synovial apoptosis inhibitor 1, synoviolin |
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| G02 | Rn.7102 | NM_012670 | TCP1 | T-complex 1 |
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| G03 | Rn.20041 | NM_153303 | TOR1A | Torsin family 1, member A (torsin A) |
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| G04 | Rn.139603 | NM_001106380 | UBE2G2 | Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) |
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| G05 | Rn.106299 | NM_001007655 | UBE2J2 | Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) |
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| G06 | Rn.2022 | NM_001012025 | UBXN4 | UBX domain protein 4 |
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| G07 | Rn.11946 | NM_053418 | UFD1L | Ubiquitin fusion degradation 1-like (yeast) |
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| G08 | Rn.162227 | NM_133596 | UGCGL1 | UDP-glucose ceramide glucosyltransferase-like 1 |
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| G09 | Rn.107678 | NM_019381 | BI-1 | Transmembrane BAX inhibitor motif containing 6 |
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| G10 | Rn.11790 | NM_001008301 | USP14 | Ubiquitin-specific peptidase 14 (tRNA-guanine transglycosylase) |
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| G11 | Rn.98891 | NM_053864 | VCP | Valosin-containing protein |
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| G12 | Rn.101044 | NM_001004210 | XBP1 | X-box binding protein 1 |
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| H01 | Rn.973 | NM_001007604 | Rplp1 | Ribosomal protein, large, P1 |
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| H02 | Rn.47 | NM_012583 | Hprt | Hypoxanthine guanine phosphoribosyl transferase |
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| H03 | Rn.92211 | NM_173340 | Rpl13a | Ribosomal protein L13A |
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| H04 | Rn.107896 | NM_017025 | Ldha | Lactate dehydrogenase A |
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| H05 | Rn.94978 | NM_031144 | Actb | Actin, beta |
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| H06 | N/A | U26919 | RGDC | Rat genomic DNA contamination |
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| H07 | N/A | SA_00104 | RTC | Reverse Transcription Control |
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| H08 | N/A | SA_00104 | RTC | Reverse transcription control |
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| H09 | N/A | SA_00104 | RTC | Reverse transcription control |
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| H10 | N/A | SA_00103 | PPC | Positive PCR control |
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| H11 | N/A | SA_00103 | PPC | Positive PCR control |
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| H12 | N/A | SA_00103 | PPC | Positive PCR control |
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Q-PCR arrays showed that the expression of the ER stress factor had significant differences in the first and the third month in diabetic rat retina: The ER stress factor of differential gene expression in the first month.
| Symbol | Gene name | The average ratio of gene expression |
| |
|---|---|---|---|---|
| DR | control |
| ||
| CCT4 |
| 9.50E − 02 | 5.90 | 0.0134 |
| DNAJB9 |
| 4.10E − 02 | 6.20 | 0.0125 |
| DNAJC3 |
| 1.70E − 02 | 3.00 | 0.0173 |
| Casp12 |
| 3.20E − 04 | 1.30 | 0.002 |
| ERP44 |
| 2.10E − 02 | 2.50 | 0.0337 |
| GANAB |
| 8.10E − 02 | 1.40 | 0.045 |
| HERPUD1 |
| 1.50E − 01 | 2.60 | 0.0006 |
| HSPA1L |
| 6.30E − 04 | 1.00 | 0.0183 |
| HSPA2 |
| 7.30E − 03 | 1.30 | 0.0183 |
| MAPK8 |
| 1.10E − 02 | 2.00 | 0.0391 |
| NUCB1 |
| 2.80E − 02 | 5.60 | 0.0289 |
| OS9 |
| 9.10E − 02 | 1.50 | 0.0272 |
| SELS |
| 7.00E − 02 | 9.30 | 0.0486 |
Q-PCR arrays showed that the expression of the ER stress factor had significant differences in the first and the third month in diabetic rat retina: The ER stress factor of differential gene expression in the third month.
| Symbol | Gene name | The average ratio of gene expression |
| |
|---|---|---|---|---|
| DR | control |
| ||
| ATF4 |
| 8.80E − 01 | 1.60E + 00 | 0.0178 |
| DNAJB9 |
| 4.10E − 02 | 5.40E − 02 | 0.0106 |
| ERO1L |
| 9.50E − 03 | 1.20E − 02 | 0.0492 |
| TRB3 |
| 5.80E − 03 | 6.10E − 02 | 0.0024 |
| HERPUD1 |
| 7.20E − 02 | 2.80E − 01 | 0.0008 |
| HTRA2 |
| 2.20E − 02 | 4.00E − 02 | 0.0064 |
| PPIA |
| 4.30E − 01 | 6.50E − 01 | 0.0238 |
| SREBF1 |
| 2.10E − 02 | 2.80E − 02 | 0.0187 |
| SYVN1/Hrd1 |
| 7.90E − 02 | 1.20E − 01 | 0.0067 |
| UFD1L |
| 1.60E − 01 | 8.00E − 02 | 0.0463 |
| UGCGL1 |
| 9.80E − 03 | 2.10E − 02 | 0.0833 |
| USP14 |
| 7.30E − 02 | 4.80E − 02 | 0.0405 |
Figure 2Western blot and immunofluorescence detected the expression of HERP and HRD1 in the first month after the development of diabetes: (a) Western blot detection of the expression of HERP and HRD1 in the first month. The expression of HERP in the diabetic group was less than that of the control group (P = 0.004); Hrd1 expression was similar in both groups (P = 0.338). (b) Immunofluorescence detection of the expression of HERP and HRD1 in the first month. The expression of HERP in the diabetic group was less than that of the control group (P = 0.008) Hrd1 expression was similar in both groups (P = 0.572).
Figure 3Western blot and immunofluorescence detected the expression of HERP and Hrd1 in the third month after the development of diabetes: (a) Western blot detection of the expression of HERP and Hrd1 in the third month. The expression of HERP and Hrd1in the diabetic group was less than that of the control group (P = 0.012 and P = 0.001, resp.). (b) immunofluorescence detection of the expression of HERP and HRD1 in the third month. The expression of HERP and Hrd1 in the diabetic group was less than that of the control group (P = 0.007 and P = 0.003, resp.).
Figure 4Immunofluorescence detection of the expression of HERP and HRD1 in RRCECs. The expression of HERP in the high glucose group was decreased compared to the control group, P = 0.013. The expression of HRD1 in the high glucose group was also decreased compared to the control group, P = 0.024.