Literature DB >> 21880814

Mounting Caenorhabditis elegans embryos for live imaging of embryogenesis.

Zhirong Bao, John I Murray.   

Abstract

Caenorhabditis elegans has been a key model organism for biomedical research. Light microscopy has played a central role in C. elegans biology. C. elegans is transparent throughout its life cycle, and its physical size, from 50 µm (embryos) to 1 mm (adults), is well suited for light microscopy. Furthermore, it has an invariant body plan that arises from an invariant cell lineage. A wide range of biological processes, from patterns of gene expression to cell migration to neuronal activity, can be readily observed in single cells with a well-defined developmental context. This protocol describes how to collect and mount young C. elegans embryos for live imaging throughout embryogenesis.

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Year:  2011        PMID: 21880814     DOI: 10.1101/pdb.prot065599

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  27 in total

1.  Isotropic Light-Sheet Microscopy and Automated Cell Lineage Analyses to Catalogue Caenorhabditis elegans Embryogenesis with Subcellular Resolution.

Authors:  Leighton H Duncan; Mark W Moyle; Lin Shao; Titas Sengupta; Richard Ikegami; Abhishek Kumar; Min Guo; Ryan Christensen; Anthony Santella; Zhirong Bao; Hari Shroff; William Mohler; Daniel A Colón-Ramos
Journal:  J Vis Exp       Date:  2019-06-06       Impact factor: 1.355

2.  Systematic quantification of developmental phenotypes at single-cell resolution during embryogenesis.

Authors:  Julia L Moore; Zhuo Du; Zhirong Bao
Journal:  Development       Date:  2013-08       Impact factor: 6.868

3.  Deep reinforcement learning of cell movement in the early stage of C.elegans embryogenesis.

Authors:  Zi Wang; Dali Wang; Chengcheng Li; Yichi Xu; Husheng Li; Zhirong Bao
Journal:  Bioinformatics       Date:  2018-09-15       Impact factor: 6.937

4.  A 4D single-cell protein atlas of transcription factors delineates spatiotemporal patterning during embryogenesis.

Authors:  Xuehua Ma; Zhiguang Zhao; Long Xiao; Weina Xu; Yahui Kou; Yanping Zhang; Gang Wu; Yangyang Wang; Zhuo Du
Journal:  Nat Methods       Date:  2021-07-26       Impact factor: 28.547

5.  An In Toto Approach to Dissecting Cellular Interactions in Complex Tissues.

Authors:  Pavak Kirit Shah; Anthony Santella; Adrian Jacobo; Kimberly Siletti; A J Hudspeth; Zhirong Bao
Journal:  Dev Cell       Date:  2017-11-20       Impact factor: 12.270

6.  A quantitative model of normal Caenorhabditis elegans embryogenesis and its disruption after stress.

Authors:  Julia L Richards; Amanda L Zacharias; Travis Walton; Joshua T Burdick; John Isaac Murray
Journal:  Dev Biol       Date:  2012-12-07       Impact factor: 3.582

7.  Gene transcription is coordinated with, but not dependent on, cell divisions during C. elegans embryonic fate specification.

Authors:  Gautham Nair; Travis Walton; John Isaac Murray; Arjun Raj
Journal:  Development       Date:  2013-07-17       Impact factor: 6.868

8.  Mechanical cues in the early embryogenesis of Caenorhabditis elegans.

Authors:  Rolf Fickentscher; Philipp Struntz; Matthias Weiss
Journal:  Biophys J       Date:  2013-10-15       Impact factor: 4.033

9.  Construction of a system for single-cell transgene induction in Caenorhabditis elegans using a pulsed infrared laser.

Authors:  Matthew A Churgin; Liping He; John I Murray; Christopher Fang-Yen
Journal:  Methods       Date:  2014-05-14       Impact factor: 3.608

10.  Physically asymmetric division of the C. elegans zygote ensures invariably successful embryogenesis.

Authors:  Radek Jankele; Rob Jelier; Pierre Gönczy
Journal:  Elife       Date:  2021-02-23       Impact factor: 8.140

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