Literature DB >> 21877686

A prebiotic role for 8-oxoguanosine as a flavin mimic in pyrimidine dimer photorepair.

Khiem Van Nguyen1, Cynthia J Burrows.   

Abstract

Redox-active enzyme cofactors derived from ribonucleotides have been called "fossils of the RNA world," suggesting that early catalysts employed modified nucleobases to facilitate redox chemistry in primitive metabolism. Here, we show that the common oxidative damage product 8-oxo-7,8-dihydroguanine (OG), when incorporated into a DNA or RNA strand in proximity to a cyclobutane pyrimidine dimer, can mimic the function of a flavin in photorepair. The OG nucleotide acts catalytically in a mechanism consistent with that of photolyase in which the photoexcited state of the purine donates an electron to a pyrimidine dimer to initiate bond cleavage; subsequent back electron transfer regenerates OG. This unusual example of one form of DNA damage, oxidation, functioning to repair another, photodimerization, may provide insight into the origins of prebiotic redox processes.

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Year:  2011        PMID: 21877686     DOI: 10.1021/ja2072252

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Refining the genetic alphabet: a late-period selection pressure?

Authors:  Andro C Rios; Yitzhak Tor
Journal:  Astrobiology       Date:  2012-09       Impact factor: 4.335

Review 2.  Chemical and biological consequences of oxidatively damaged guanine in DNA.

Authors:  Sarah Delaney; Daniel A Jarem; Catherine B Volle; Craig J Yennie
Journal:  Free Radic Res       Date:  2012-02-22

3.  Excited state proton-coupled electron transfer in 8-oxoG-C and 8-oxoG-A base pairs: a time dependent density functional theory (TD-DFT) study.

Authors:  Anil Kumar; Michael D Sevilla
Journal:  Photochem Photobiol Sci       Date:  2013-08       Impact factor: 3.982

4.  On the Origin of the Canonical Nucleobases: An Assessment of Selection Pressures across Chemical and Early Biological Evolution.

Authors:  Andro C Rios; Yitzhak Tor
Journal:  Isr J Chem       Date:  2013-06       Impact factor: 3.333

5.  Sequence-dependent thymine dimer formation and photoreversal rates in double-stranded DNA.

Authors:  Yu Kay Law; Robert A Forties; Xin Liu; Michael G Poirier; Bern Kohler
Journal:  Photochem Photobiol Sci       Date:  2013-08       Impact factor: 3.982

6.  Efficient UV-induced charge separation and recombination in an 8-oxoguanine-containing dinucleotide.

Authors:  Yuyuan Zhang; Jordan Dood; Ashley A Beckstead; Xi-Bo Li; Khiem V Nguyen; Cynthia J Burrows; Roberto Improta; Bern Kohler
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-28       Impact factor: 11.205

7.  2,6-diaminopurine promotes repair of DNA lesions under prebiotic conditions.

Authors:  Rafał Szabla; Magdalena Zdrowowicz; Paulina Spisz; Nicholas J Green; Petr Stadlbauer; Holger Kruse; Jiří Šponer; Janusz Rak
Journal:  Nat Commun       Date:  2021-05-21       Impact factor: 17.694

8.  Single-molecule analysis of thymine dimer-containing G-quadruplexes formed from the human telomere sequence.

Authors:  Anna H Wolna; Aaron M Fleming; Cynthia J Burrows
Journal:  Biochemistry       Date:  2014-11-26       Impact factor: 3.162

9.  Divergent prebiotic synthesis of pyrimidine and 8-oxo-purine ribonucleotides.

Authors:  Shaun Stairs; Arif Nikmal; Dejan-Krešimir Bučar; Shao-Liang Zheng; Jack W Szostak; Matthew W Powner
Journal:  Nat Commun       Date:  2017-05-19       Impact factor: 14.919

10.  Effect of sequence and metal ions on UVB-induced anti cyclobutane pyrimidine dimer formation in human telomeric DNA sequences.

Authors:  Jillian E Smith; Chen Lu; John-Stephen Taylor
Journal:  Nucleic Acids Res       Date:  2014-03-04       Impact factor: 16.971

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