Literature DB >> 21862385

Inside the 40S ribosome assembly machinery.

Katrin Karbstein1.   

Abstract

Ribosome assembly involves rRNA transcription, modification, folding and cleavage from precursor transcripts, and association of ribosomal proteins (Rps). In bacteria, this complex process requires only a handful of proteins in addition to those needed for rRNA transcription, modification and cleavage, while in eukaryotes a large machinery comprising ∼200 proteins in the yeast S. cerevisiae has been identified. Furthermore, while the bacterial assembly factors generally produce only cold-sensitive phenotypes upon deletion, most of the eukaryotic assembly factors are essential, comprising ∼20% of essential yeast proteins. This review explores recent rapid progress in the structural and functional dissection of the 40S assembly machinery.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21862385      PMCID: PMC3329787          DOI: 10.1016/j.cbpa.2011.07.023

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  62 in total

1.  Visualizing ribosome biogenesis: parallel assembly pathways for the 30S subunit.

Authors:  Anke M Mulder; Craig Yoshioka; Andrea H Beck; Anne E Bunner; Ronald A Milligan; Clinton S Potter; Bridget Carragher; James R Williamson
Journal:  Science       Date:  2010-10-29       Impact factor: 47.728

2.  Why Dom34 stimulates growth of cells with defects of 40S ribosomal subunit biosynthesis.

Authors:  Arpita Bhattacharya; Kerri B McIntosh; Ian M Willis; Jonathan R Warner
Journal:  Mol Cell Biol       Date:  2010-09-27       Impact factor: 4.272

3.  Yeast pre-rRNA processing and modification occur cotranscriptionally.

Authors:  Martin Kos; David Tollervey
Journal:  Mol Cell       Date:  2010-03-26       Impact factor: 17.970

4.  Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.

Authors:  Kai-Yin Lo; Zhihua Li; Cyril Bussiere; Stefan Bresson; Edward M Marcotte; Arlen W Johnson
Journal:  Mol Cell       Date:  2010-07-30       Impact factor: 17.970

5.  Utp25p, a nucleolar Saccharomyces cerevisiae protein, interacts with U3 snoRNP subunits and affects processing of the 35S pre-rRNA.

Authors:  Mauricio B Goldfeder; Carla C Oliveira
Journal:  FEBS J       Date:  2010-05-27       Impact factor: 5.542

6.  The DEAD-box RNA helicase-like Utp25 is an SSU processome component.

Authors:  J Michael Charette; Susan J Baserga
Journal:  RNA       Date:  2010-09-30       Impact factor: 4.942

7.  An RNA conformational switch regulates pre-18S rRNA cleavage.

Authors:  Allison C Lamanna; Katrin Karbstein
Journal:  J Mol Biol       Date:  2010-10-08       Impact factor: 5.469

Review 8.  Maturation of eukaryotic ribosomes: acquisition of functionality.

Authors:  Vikram Govind Panse; Arlen W Johnson
Journal:  Trends Biochem Sci       Date:  2010-05       Impact factor: 13.807

9.  Cracking pre-40S ribosomal subunit structure by systematic analyses of RNA-protein cross-linking.

Authors:  Sander Granneman; Elisabeth Petfalski; Agata Swiatkowska; David Tollervey
Journal:  EMBO J       Date:  2010-05-07       Impact factor: 11.598

10.  The C-terminus of Utp4, mutated in childhood cirrhosis, is essential for ribosome biogenesis.

Authors:  Emily F Freed; Susan J Baserga
Journal:  Nucleic Acids Res       Date:  2010-04-12       Impact factor: 16.971

View more
  38 in total

1.  Trm112 is required for Bud23-mediated methylation of the 18S rRNA at position G1575.

Authors:  Sabine Figaro; Ludivine Wacheul; Stéphanie Schillewaert; Marc Graille; Emmeline Huvelle; Rémi Mongeard; Christiane Zorbas; Denis L J Lafontaine; Valérie Heurgué-Hamard
Journal:  Mol Cell Biol       Date:  2012-04-09       Impact factor: 4.272

Review 2.  One core, two shells: bacterial and eukaryotic ribosomes.

Authors:  Sergey Melnikov; Adam Ben-Shem; Nicolas Garreau de Loubresse; Lasse Jenner; Gulnara Yusupova; Marat Yusupov
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

3.  A translation-like cycle is a quality control checkpoint for maturing 40S ribosome subunits.

Authors:  Bethany S Strunk; Megan N Novak; Crystal L Young; Katrin Karbstein
Journal:  Cell       Date:  2012-07-06       Impact factor: 41.582

4.  Utp14 Recruits and Activates the RNA Helicase Dhr1 To Undock U3 snoRNA from the Preribosome.

Authors:  Jieyi Zhu; Xin Liu; Margarida Anjos; Carl C Correll; Arlen W Johnson
Journal:  Mol Cell Biol       Date:  2016-01-04       Impact factor: 4.272

Review 5.  Paradigms of ribosome synthesis: Lessons learned from ribosomal proteins.

Authors:  Michael Gamalinda; John L Woolford
Journal:  Translation (Austin)       Date:  2015-02-02

6.  Ribosomal proteins L7 and L8 function in concert with six A₃ assembly factors to propagate assembly of domains I and II of 25S rRNA in yeast 60S ribosomal subunits.

Authors:  Jelena Jakovljevic; Uli Ohmayer; Michael Gamalinda; Jason Talkish; Lisa Alexander; Jan Linnemann; Philipp Milkereit; John L Woolford
Journal:  RNA       Date:  2012-08-14       Impact factor: 4.942

7.  Dissecting macromolecular recognition sites in ribosome: implication to its self-assembly.

Authors:  Smita P Pilla; Amal Thomas; Ranjit Prasad Bahadur
Journal:  RNA Biol       Date:  2019-06-17       Impact factor: 4.652

8.  Interaction between ribosome assembly factors Krr1 and Faf1 is essential for formation of small ribosomal subunit in yeast.

Authors:  Sanduo Zheng; Pengfei Lan; Ximing Liu; Keqiong Ye
Journal:  J Biol Chem       Date:  2014-07-02       Impact factor: 5.157

9.  Increased replicative fitness can lead to decreased drug sensitivity of hepatitis C virus.

Authors:  Julie Sheldon; Nathan M Beach; Elena Moreno; Isabel Gallego; David Piñeiro; Encarnación Martínez-Salas; Josep Gregori; Josep Quer; Juan Ignacio Esteban; Charles M Rice; Esteban Domingo; Celia Perales
Journal:  J Virol       Date:  2014-08-13       Impact factor: 5.103

10.  Ribosomal RNA Biogenesis and Its Response to Chilling Stress in Oryza sativa.

Authors:  Runlai Hang; Zhen Wang; Xian Deng; Chunyan Liu; Bin Yan; Chao Yang; Xianwei Song; Beixin Mo; Xiaofeng Cao
Journal:  Plant Physiol       Date:  2018-03-19       Impact factor: 8.340

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.