Literature DB >> 21860079

Computerized three-class classification of MRI-based prognostic markers for breast cancer.

Neha Bhooshan1, Maryellen Giger, Darrin Edwards, Yading Yuan, Sanaz Jansen, Hui Li, Li Lan, Husain Sattar, Gillian Newstead.   

Abstract

The purpose of this study is to investigate whether computerized analysis using three-class Bayesian artificial neural network (BANN) feature selection and classification can characterize tumor grades (grade 1, grade 2 and grade 3) of breast lesions for prognostic classification on DCE-MRI. A database of 26 IDC grade 1 lesions, 86 IDC grade 2 lesions and 58 IDC grade 3 lesions was collected. The computer automatically segmented the lesions, and kinetic and morphological lesion features were automatically extracted. The discrimination tasks-grade 1 versus grade 3, grade 2 versus grade 3, and grade 1 versus grade 2 lesions-were investigated. Step-wise feature selection was conducted by three-class BANNs. Classification was performed with three-class BANNs using leave-one-lesion-out cross-validation to yield computer-estimated probabilities of being grade 3 lesion, grade 2 lesion and grade 1 lesion. Two-class ROC analysis was used to evaluate the performances. We achieved AUC values of 0.80 ± 0.05, 0.78 ± 0.05 and 0.62 ± 0.05 for grade 1 versus grade 3, grade 1 versus grade 2, and grade 2 versus grade 3, respectively. This study shows the potential for (1) applying three-class BANN feature selection and classification to CADx and (2) expanding the role of DCE-MRI CADx from diagnostic to prognostic classification in distinguishing tumor grades.

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Mesh:

Year:  2011        PMID: 21860079      PMCID: PMC4134441          DOI: 10.1088/0031-9155/56/18/014

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  43 in total

1.  Ideal observer approximation using Bayesian classification neural networks.

Authors:  M A Kupinski; D C Edwards; M L Giger; C E Metz
Journal:  IEEE Trans Med Imaging       Date:  2001-09       Impact factor: 10.048

2.  Estimating three-class ideal observer decision variables for computerized detection and classification of mammographic mass lesions.

Authors:  Darrin C Edwards; Li Lan; Charles E Metz; Maryellen L Giger; Robert M Nishikawa
Journal:  Med Phys       Date:  2004-01       Impact factor: 4.071

3.  Textural analysis of contrast-enhanced MR images of the breast.

Authors:  Peter Gibbs; Lindsay W Turnbull
Journal:  Magn Reson Med       Date:  2003-07       Impact factor: 4.668

4.  Computerized interpretation of breast MRI: investigation of enhancement-variance dynamics.

Authors:  Weijie Chen; Maryellen L Giger; Li Lan; Ulrich Bick
Journal:  Med Phys       Date:  2004-05       Impact factor: 4.071

5.  Time-dependent effects on survival in breast carcinoma: results of 20 years of follow-up from the Swedish Two-County Study.

Authors:  Jane Warwick; Lazlo Tabàr; Bedrich Vitak; Stephen W Duffy
Journal:  Cancer       Date:  2004-04-01       Impact factor: 6.860

6.  Evaluation of clinical breast MR imaging performed with prototype computer-aided diagnosis breast MR imaging workstation: reader study.

Authors:  Akiko Shimauchi; Maryellen L Giger; Neha Bhooshan; Li Lan; Lorenzo L Pesce; John K Lee; Hiroyuki Abe; Gillian M Newstead
Journal:  Radiology       Date:  2011-01-06       Impact factor: 11.105

7.  Potential of computer-aided diagnosis to reduce variability in radiologists' interpretations of mammograms depicting microcalcifications.

Authors:  Y Jiang; R M Nishikawa; R A Schmidt; A Y Toledano; K Doi
Journal:  Radiology       Date:  2001-09       Impact factor: 11.105

8.  Observer variability and applicability of BI-RADS terminology for breast MR imaging: invasive carcinomas as focal masses.

Authors:  S J Kim; E A Morris; L Liberman; D J Ballon; L R La Trenta; O Hadar; A Abramson; D D Dershaw
Journal:  AJR Am J Roentgenol       Date:  2001-09       Impact factor: 3.959

9.  Invasive breast cancer: correlation of dynamic MR features with prognostic factors.

Authors:  Botond K Szabó; Peter Aspelin; Maria Kristoffersen Wiberg; Tibor Tot; Beata Boné
Journal:  Eur Radiol       Date:  2003-07-26       Impact factor: 5.315

10.  Vascular grading of angiogenesis: prognostic significance in breast cancer.

Authors:  S Hansen; D A Grabau; F B Sørensen; M Bak; W Vach; C Rose
Journal:  Br J Cancer       Date:  2000-01       Impact factor: 7.640

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  18 in total

1.  Contrast-Enhanced Mammography and Radiomics Analysis for Noninvasive Breast Cancer Characterization: Initial Results.

Authors:  Maria Adele Marino; Katja Pinker; Doris Leithner; Janice Sung; Daly Avendano; Elizabeth A Morris; Maxine Jochelson
Journal:  Mol Imaging Biol       Date:  2020-06       Impact factor: 3.488

2.  Classification of small lesions on dynamic breast MRI: Integrating dimension reduction and out-of-sample extension into CADx methodology.

Authors:  Mahesh B Nagarajan; Markus B Huber; Thomas Schlossbauer; Gerda Leinsinger; Andrzej Krol; Axel Wismüller
Journal:  Artif Intell Med       Date:  2013-11-23       Impact factor: 5.326

Review 3.  Using quantitative image analysis to classify axillary lymph nodes on breast MRI: a new application for the Z 0011 Era.

Authors:  David V Schacht; Karen Drukker; Iris Pak; Hiroyuki Abe; Maryellen L Giger
Journal:  Eur J Radiol       Date:  2014-12-15       Impact factor: 3.528

4.  Predicting Breast Cancer Molecular Subtype with MRI Dataset Utilizing Convolutional Neural Network Algorithm.

Authors:  Richard Ha; Simukayi Mutasa; Jenika Karcich; Nishant Gupta; Eduardo Pascual Van Sant; John Nemer; Mary Sun; Peter Chang; Michael Z Liu; Sachin Jambawalikar
Journal:  J Digit Imaging       Date:  2019-04       Impact factor: 4.056

5.  Using computer-extracted image phenotypes from tumors on breast magnetic resonance imaging to predict breast cancer pathologic stage.

Authors:  Elizabeth S Burnside; Karen Drukker; Hui Li; Ermelinda Bonaccio; Margarita Zuley; Marie Ganott; Jose M Net; Elizabeth J Sutton; Kathleen R Brandt; Gary J Whitman; Suzanne D Conzen; Li Lan; Yuan Ji; Yitan Zhu; Carl C Jaffe; Erich P Huang; John B Freymann; Justin S Kirby; Elizabeth A Morris; Maryellen L Giger
Journal:  Cancer       Date:  2015-11-30       Impact factor: 6.860

6.  Quantitative ultrasound image analysis of axillary lymph node status in breast cancer patients.

Authors:  Karen Drukker; Maryellen Giger; Lina Arbash Meinel; Adam Starkey; Jyothi Janardanan; Hiroyuki Abe
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-03-24       Impact factor: 2.924

7.  MR Imaging Radiomics Signatures for Predicting the Risk of Breast Cancer Recurrence as Given by Research Versions of MammaPrint, Oncotype DX, and PAM50 Gene Assays.

Authors:  Hui Li; Yitan Zhu; Elizabeth S Burnside; Karen Drukker; Katherine A Hoadley; Cheng Fan; Suzanne D Conzen; Gary J Whitman; Elizabeth J Sutton; Jose M Net; Marie Ganott; Erich Huang; Elizabeth A Morris; Charles M Perou; Yuan Ji; Maryellen L Giger
Journal:  Radiology       Date:  2016-05-05       Impact factor: 11.105

8.  Statistical Learning Algorithm for in situ and invasive breast carcinoma segmentation.

Authors:  Jagadeesan Jayender; Eva Gombos; Sona Chikarmane; Donnette Dabydeen; Ferenc A Jolesz; Kirby G Vosburgh
Journal:  Comput Med Imaging Graph       Date:  2013-05-19       Impact factor: 4.790

9.  Prediction of clinical phenotypes in invasive breast carcinomas from the integration of radiomics and genomics data.

Authors:  Wentian Guo; Hui Li; Yitan Zhu; Li Lan; Shengjie Yang; Karen Drukker; Elizabeth Morris; Elizabeth Burnside; Gary Whitman; Maryellen L Giger; Yuan Ji
Journal:  J Med Imaging (Bellingham)       Date:  2015-09-23

10.  Relationships Between Human-Extracted MRI Tumor Phenotypes of Breast Cancer and Clinical Prognostic Indicators Including Receptor Status and Molecular Subtype.

Authors:  Jose M Net; Gary J Whitman; Elizabteh Morris; Kathleen R Brandt; Elizabeth S Burnside; Maryellen L Giger; Marie Ganott; Elizabeth J Sutton; Margarita L Zuley; Arvind Rao
Journal:  Curr Probl Diagn Radiol       Date:  2018-08-23
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