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Literature DB >> 2185457

Compilation of DNA sequences of Escherichia coli (update 1990).

Abstract

We have compiled the DNA sequence data for E.coli available from the GENBANK and EMBL data libraries and over a period of several years independently from the literature. This is the second listing replacing and increasing the former listing roughly by one third. After deletion of all detected overlaps a total of 1 248 696 individual bp is found to be determined till the beginning of 1990. This corresponds to a total of 26.46% of the entire E. coli chromosome consisting of about 4,720 kbp. This number may actually be higher by some extra 2% derived from the sequence of lysogenic bacteriophage lambda and various insertion sequences. This compilation is now available in machine readable form from the EMBL data library.

Entities: Species

Mesh：

Substances：
DNA, Bacterial

Year: 1990 PMID： 2185457 PMCID： PMC331880 DOI： 10.1093/nar/18.suppl.2549

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

37 in total

1. Cell cycle-dependent regulation of histone precursor mRNA processing by modulation of U7 snRNA accessibility.

Authors: I Hoffmann; M L Birnstiel
Journal: Nature Date: 1990-08-16 Impact factor: 49.962

2. Histone-specific RNA 3' processing in nuclear extracts from mammalian cells.

Authors: C Stauber; D Soldati; B Lüscher; D Schümperli
Journal: Methods Enzymol Date: 1990 Impact factor: 1.600

3. Completion of the detailed restriction map of the E. coli genome by the isolation of overlapping cosmid clones.

Authors: V Knott; D J Blake; G G Brownlee
Journal: Nucleic Acids Res Date: 1989-08-11 Impact factor: 16.971

4. Conserved terminal hairpin sequences of histone mRNA precursors are not involved in duplex formation with the U7 RNA but act as a target site for a distinct processing factor.

Authors: A P Vasserot; F J Schaufele; M L Birnstiel
Journal: Proc Natl Acad Sci U S A Date: 1989-06 Impact factor: 11.205

5. Each of the conserved sequence elements flanking the cleavage site of mammalian histone pre-mRNAs has a distinct role in the 3'-end processing reaction.

Authors: K L Mowry; R Oh; J A Steitz
Journal: Mol Cell Biol Date: 1989-07 Impact factor: 4.272

6. Rapid and efficient site-specific mutagenesis without phenotypic selection.

Authors: T A Kunkel; J D Roberts; R A Zakour
Journal: Methods Enzymol Date: 1987 Impact factor: 1.600

7. Mapping of sequenced genes (700 kbp) in the restriction map of the Escherichia coli chromosome.

Authors: C Médigue; J P Bouché; A Hénaut; A Danchin
Journal: Mol Microbiol Date: 1990-02 Impact factor: 3.501

8. Alignment of Escherichia coli K12 DNA sequences to a genomic restriction map.

Authors: K E Rudd; W Miller; J Ostell; D A Benson
Journal: Nucleic Acids Res Date: 1990-01-25 Impact factor: 16.971

9. Complete maps of IS1, IS2, IS3, IS4, IS5, IS30 and IS150 locations in Escherichia coli K12.

Authors: R P Birkenbihl; W Vielmetter
Journal: Mol Gen Genet Date: 1989-12

10. Multiple processing-defective mutations in a mammalian histone pre-mRNA are suppressed by compensatory changes in U7 RNA both in vivo and in vitro.

Authors: U M Bond; T A Yario; J A Steitz
Journal: Genes Dev Date: 1991-09 Impact factor: 11.361

16 in total

1. Localization of the glnD gene on a revised map of the 200-kilobase region of the Escherichia coli chromosome.

Authors: W van Heeswijk; O Kuppinger; M Merrick; D Kahn
Journal: J Bacteriol Date: 1992-03 Impact factor: 3.490

2. A novel repeated DNA sequence located in the intergenic regions of bacterial chromosomes.

Authors: G J Sharples; R G Lloyd
Journal: Nucleic Acids Res Date: 1990-11-25 Impact factor: 16.971

3. The tdh and serA operons of Escherichia coli: mutational analysis of the regulatory elements of leucine-responsive genes.

Authors: J H Rex; B D Aronson; R L Somerville
Journal: J Bacteriol Date: 1991-10 Impact factor: 3.490

4. Compilation of DNA sequences of Escherichia coli (update 1992).

Authors: M Kröger; R Wahl; G Schachtel; P Rice
Journal: Nucleic Acids Res Date: 1992-05-11 Impact factor: 16.971

5. Compilation of DNA sequences of Escherichia coli K12: description of the interactive databases ECD and ECDC (update 1996).

Authors: M Kröger; R Wahl
Journal: Nucleic Acids Res Date: 1997-01-01 Impact factor: 16.971

Review 9. Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: codon usage, map position, and concerted evolution.

Authors: P M Sharp
Journal: J Mol Evol Date: 1991-07 Impact factor: 2.395

10. ECD--a totally integrated database of Escherichia coli K12.

Authors: R Wahl; P Rice; C M Rice; M Kröger
Journal: Nucleic Acids Res Date: 1994-09 Impact factor: 16.971