| Literature DB >> 21853245 |
John R Davies1, Yu-Mei Chang, Helen Snowden, May Chan, Susan Leake, Birute Karpavicius, Sue Haynes, Kairen Kukalizch, Juliette Randerson-Moor, Faye Elliott, Julian Barth, Peter A Kanetsky, Mark Harland, D Timothy Bishop, Jennifer H Barrett, Julia A Newton-Bishop.
Abstract
BACKGROUND: We report the determinants of serum levels of vitamin D in a U.K. melanoma case-control study benefitting from detailed exposure and genotyping data.Entities:
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Year: 2011 PMID: 21853245 PMCID: PMC3176401 DOI: 10.1007/s10552-011-9827-3
Source DB: PubMed Journal: Cancer Causes Control ISSN: 0957-5243 Impact factor: 2.506
Mean vitamin D levels and distribution of age, sex, sensitivity, BMI, Townsend score, and sunscreen usage in cases, population controls, and sibling controls
| Risk factor | Cases | Population controls | Sibling controls |
|
|---|---|---|---|---|
| Vitamin D (nmol/L) | ||||
| Mean (SD) | 53.5 (21.9) | 57.3 (19.4) | 60.1 (25.2) | 0.0008* |
| Mean vitamin D by season | ||||
| 1 (Jan–Mar) | 45.5 (19.4) | 52.3 (22.8) | 46.6 (19.4) | 0.3* |
| 2 | 50.8 (20.4) | 55.3 (16.2) | 61.8 (28.5) | 0.05* |
| 3 | 65.3 (21.1) | 61.0 (18.9) | 65.6 (25.3) | 0.6* |
| 4 | 52.0 (21.3) | 55.0 (20.2) | 64.7 (22.2) | 0.008* |
| Sex | ||||
| Male | 350 (39.8%) | 78 (40.2%) | 40 (31.0%) | 0.2** |
| Female | 530 (60.2%) | 116 (59.8%) | 89 (69.0%) | |
| Age at diagnosis/interview | ||||
| <40 | 196 (22.2%) | 19 (9.8%) | 25 (19.4%) | <0.0001*** |
| 40–50 | 186 (21.1%) | 27 (13.9%) | 38 (29.5%) | |
| 50–60 | 213 (24.2%) | 63 (32.5%) | 29 (22.5%) | |
| 60–70 | 195 (22.2%) | 42 (21.6%) | 30 (23.2%) | |
| >70 | 90 (10.2%) | 43 (22.2%) | 7 (5.4%) | |
| Sun sensitivity score | ||||
| Not sensitive | 384 (43.8%) | 111 (57.2%) | 72 (56.3%) | 0.0003** |
| Sensitive | 493 (56.2%) | 83 (42.8%) | 56 (43.8%) | |
| BMI | ||||
| <18.5 | 8 (0.9%) | 1 (0.5%) | 2 (1.6%) | 0.02*** |
| 18.5–25 | 345 (39.8%) | 98 (50.5%) | 54 (42.2%) | |
| 25–30 | 338 (39.0%) | 74 (38.1%) | 52 (40.6%) | |
| >30 | 175 (20.2%) | 21 (10.8%) | 20 (15.6%) | |
| Townsend | ||||
| 1 (lowest quartile) | 149 (17.2%) | 39 (20.4%) | 29 (23.2%) | 0.05** |
| 2 | 246 (28.5%) | 63 (33.0%) | 38 (30.4%) | |
| 3 | 243 (28.1%) | 59 (30.9%) | 33 (26.4%) | |
| 4 (highest quartile) | 226 (26.2%) | 30 (15.7%) | 25 (20.0%) | |
| Recent sunscreen usage | ||||
| None | 326 (38.2%) | 66 (34.0%) | 60 (46.9%) | 0.1** |
| SPF low | 133 (15.6%) | 26 (13.4%) | 13 (10.2%) | |
| SPF high | 395 (46.3%) | 102 (52.6%) | 55 (43.0%) |
Vitamin D levels are reported both stratified by season and overall. Sun sensitivity is a dichotomous measure generated using factor analysis of six correlated variables related to sun sensitivity (see Supplementary Data). Values are given as absolute numbers of individuals belonging to each class and the percentage of the total. For vitamin D levels, the mean and standard deviation for each group is given
* Differences between vitamin D levels in cases, population, and sibling controls tested using a Kruskal–Wallis test
** Differences between groups (cases, population, and sibling controls) tested using a chi-squared test
*** Differences between groups (cases, population, and sibling controls) tested using Fisher’s exact test
Predictors of blood vitamin D concentration (nmol/L) in multiple linear regression models for cases, controls, and both cases and controls combined
| Factor | Cases | Controls | Cases + controls | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Estimate | SE |
|
| Estimate | SE |
| Estimate | SE |
| |
| Season | |||||||||||
| 1 (Jan to March-baseline) | 239 | 0 | 53 | 0 | 0 | ||||||
| 2 | 183 | 5.56 | 1.98 | 0.005 | 71 | 9.00 | 3.89 | 0.02 | 6.41 | 1.76 | 0.0003 |
| 3 | 231 | 19.74 | 1.86 | <0.0001 | 115 | 14.04 | 3.65 | 0.0001 | 18.0 | 1.64 | <0.0001 |
| 4 | 197 | 5.83 | 1.94 | 0.003 | 76 | 9.67 | 3.85 | 0.01 | 6.94 | 1.73 | <0.0001 |
| BMI | 850 | −0.50 | 0.15 | 0.0007 | 315 | −0.62 | 0.24 | 0.01 | −0.52 | 0.12 | <0.0001 |
| Sex | |||||||||||
| Female (baseline) | 512 | 0 | 197 | 0 | 0 | ||||||
| Male | 338 | 0.86 | 1.44 | 0.5 | 118 | −1.00 | 2.60 | 0.7 | 0.69 | 1.25 | 0.6 |
| Age (per year) | 850 | 0.22 | 0.05 | <0.0001 | 315 | 0.1 | 0.10 | 0.6 | 0.20 | 0.05 | <0.0001 |
| Townsend | 850 | −0.26 | 0.23 | 0.2 | 315 | −0.46 | 0.49 | 0.3 | −0.32 | 0.21 | 0.1 |
| Case–control status | |||||||||||
| Case | – | – | – | – | – | – | – | – | 0 (baseline) | ||
| Population control | – | – | – | – | 191 | 0 (baseline) | −0.33 | 1.69 | 0.9 | ||
| Sibling control | – | – | – | – | 124 | 4.87 | 2.59 | 0.06 | 5.73 | 1.98 | 0.004 |
| Supplementation status | |||||||||||
| No (baseline) | 552 | 0 | – | – | – | – | – | – | – | ||
| Yes | 246 | 10.6* | 1.48 | <0.0001 | – | – | – | – | – | – | – |
| Sun sensitivity index | |||||||||||
| Non-sun-sensitive (baseline) | 373 | 0 | 180 | 0 | 0 | ||||||
| Sun sensitive | 476 | −2.74* | 1.38 | 0.05 | 135 | −1.71* | 2.40 | 0.5 | −2.61* | 1.20 | 0.03 |
| Nevus number | |||||||||||
| 0–9 (baseline) | 78 | 0 | 68 | 0 | 0 | ||||||
| 10–24 | 170 | 5.39* | 2.74 | 0.05 | 95 | 4.35* | 3.31 | 0.2 | 5.36* | 2.09 | 0.01 |
| >24 | 601 | 3.80* | 2.41 | 0.1 | 131 | 8.89* | 3.11 | 0.004 | 5.29* | 1.84 | 0.004 |
| Freckling total (%) | |||||||||||
| 0–16.7 (baseline) | 228 | 0 | 104 | 0 | 0 | ||||||
| 16.7–41.7 | 274 | 2.75* | 1.77 | 0.1 | 88 | 6.23* | 2.99 | 0.04 | 3.60* | 1.53 | 0.02 |
| >41.7 | 336 | 4.44* | 1.70 | 0.009 | 97 | 10.94* | 2.91 | 0.0002 | 5.88* | 1.47 | <0.0001 |
| Freckling shoulders (%) | |||||||||||
| 0–10 (baseline) | 185 | 0 | 98 | 0 | 0 | ||||||
| 10–60 | 390 | 5.77* | 1.75 | 0.001 | 113 | 7.18* | 2.82 | 0.01 | 6.11* | 1.48 | <0.0001 |
| >60 | 265 | 7.56* | 1.88 | <0.0001 | 80 | 13.37* | 3.07 | <0.0001 | 8.87* | 1.60 | <0.0001 |
| Sunscreen usage | |||||||||||
| None (baseline) | 318 | 0 | 125 | 0 | 0 | ||||||
| SPF low | 126 | 3.67* | 2.10 | 0.08 | 39 | 11.75* | 3.80 | 0.002 | 5.72* | 1.85 | 0.002 |
| SPF high | 385 | 0.54* | 1.51 | 0.7 | 151 | 3.61* | 2.50 | 0.2 | 1.32* | 1.30 | 0.3 |
| Daily sun exposure (per tertile) | 822 | 2.22** | 0.86 | 0.01 | 308 | 2.94** | 1.50 | 0.05 | 2.48** | 0.75 | 0.0009 |
| Weekend sun exposure | |||||||||||
| Overall (per tertile) | 831 | 3.21** | 0.88 | 0.0002 | 310 | 5.98** | 1.49 | <0.0001 | 3.97** | 0.76 | <0.0001 |
| Cooler months (per tertile) | 831 | 2.39** | 0.83 | 0.004 | 311 | 3.19** | 1.32 | 0.02 | 2.72** | 0.70 | 0.0001 |
| Warmer months (per tertile) | 831 | 3.11** | 0.90 | 0.0006 | 310 | 7.27** | 1.55 | <0.0001 | 4.17** | 1.19 | <0.0001 |
| Holiday sun exposure | |||||||||||
| Overall (per tertile) | 834 | 3.21** | 0.88 | 0.0003 | 312 | 4.25** | 1.44 | 0.003 | 3.56** | 0.75 | <0.0001 |
| Lower than 45o (per tertile) | 834 | 4.70** | 0.82 | <0.0001 | 312 | 3.99** | 1.39 | 0.004 | 4.47** | 1.18 | <0.0001 |
| rs2282679 (GC) | |||||||||||
| TT (baseline) | 426 | 0 | 158 | 0 | 0 | ||||||
| GT | 335 | −5.58* | 1.43 | 0.0001 | 138 | −5.85* | 2.44 | 0.01 | −5.79* | 1.24 | <0.0001 |
| GG | 85 | −12.57* | 2.34 | <0.0001 | 15 | −2.09* | 5.65 | 0.7 | −10.80* | 2.18 | <0.0001 |
| rs7944926 (NADSYN1) | |||||||||||
| GG (baseline) | 493 | 0 | 178 | 0 | 0 | ||||||
| AG | 300 | −3.65* | 1.46 | 0.01 | 120 | 0.86* | 2.47 | 0.7 | −2.50* | 1.26 | 0.05 |
| AA | 47 | −4.60* | 3.05 | 0.1 | 12 | −10.9* | 6.23 | 0.08 | −6.00* | 2.76 | 0.03 |
| rs10741657 (CYP2R1) | |||||||||||
| GG (baseline) | 287 | 0 | 125 | 0 | 0 | ||||||
| AG | 383 | −3.47* | 1.56 | 0.03 | 139 | 5.05* | 2.56 | 0.04 | −0.84* | 1.34 | 0.5 |
| AA | 154 | 0.66* | 2.00 | 0.7 | 45 | 9.03* | 3.60 | 0.01 | 3.21* | 1.76 | 0.07 |
Season, age, sex, BMI, case–control status (where appropriate), and Townsend score were included together in the multivariable model described in the top part of the table
* Corrected for season, age, sex, case–control status (where appropriate), BMI, and Townsend score. Adjusted estimates used as a baseline the estimated vitamin D level of a 54 year old case woman with a BMI score of 25, living in an area with a Townsend score of 0 (neither deprived nor affluent), whose blood was sampled in winter. In the control group only, the baseline was calculated using the estimated vitamin D level of a population control instead of a case
** Corrected for sun sensitivity status in addition to season, age, sex, case–control status (where appropriate), BMI, and Townsend score
Fig. 1Influence of sensitivity, supplementation and sun exposure on vitamin D levels. For each subject recent weekend sun exposure in warmer months is plotted against serum vitamin D levels by skin sensitivity. Individuals who are sun-sensitive are in red, individuals who are not sun-sensitive are in green. LOESS curves are plotted to show how vitamin D levels vary with exposure for each group. In the second panel, only cases who have not taken vitamin D supplements are shown and in the third panel only cases who have taken vitamin D supplements are shown
Fig. 2Influence of SNP genotype and sun exposure on vitamin D levels. For each subject, recent weekend sun exposure in warmer months is plotted against adjusted serum vitamin D levels for the cases by presence of rare alleles for two SNPs under a dominant model (0, 1+) or as three distinct genotypes (0, 1, 2); a rs2282679, b rs7944926. LOESS curves are plotted to show how vitamin D levels vary with exposure for each group. Vitamin D levels adjusted by BMI, age, season the sample was taken, sex, case–control status, vitamin D supplementation, and Townsend score
Proportion of variation explained (r 2) by environmental and genetic determinants for seasonally adjusted levels of vitamin D
| Factor | Seasonally adjusted only | Adjusted | Adjusted also with supplementation | Seasonally adjusted only | Adjusted | Seasonally adjusted only | Adjusted |
|---|---|---|---|---|---|---|---|
| Cases | Controls | Cases + controls | |||||
| BMI | 1.0 | – | – | 2.1 | – | 1.3 | – |
| Sex | 0.06 | – | – | 0.2 | – | 0.02 | – |
| Age (per year) | 2.1 | – | – | 0.03 | – | 1.4 | – |
| Townsend | 0.5 | – | – | 0.3 | – | 0.6 | – |
| Case–control status | – | – | – | 1.0 | – | 0.7 | – |
| Supplementation | 7.0 | 6.0 | – | – | – | – | |
| Sun sensitivity index | 0.6 | 0.5 | 0.9 | 0.3 | 0.2 | 0.6 | 0.4 |
| Nevus number | 0.4 | 0.5 | 0.4 | 3.2 | 2.8 | 0.3 | 0.8 |
| Freckling total (%) | 0.9 | 0.8 | 0.9 | 4.0 | 4.8 | 1.3 | 1.4 |
| Freckling shoulders (%) | 1.9 | 2.0 | 1.9 | 5.7 | 6.2 | 2.4 | 2.7 |
| Sunscreen usage | 0.5 | 0.4 | 0.3 | 3.5 | 3.0 | 0.9 | 0.8 |
| Sun exposure** | – | 5.2 | 5.4 | – | 8.7 | – | 6.0 |
| Daily sun exposure* | 0.4 | 0.8 | 1.0 | 1.3 | 1.2 | 0.6 | 1.0 |
| Weekend sun exposure* | |||||||
| Overall* | 2.3 | 1.7 | 2.1 | 5.1 | 5.1 | 3.2 | 2.4 |
| Weekend exposure cooler months* | 1.4 | 1.1 | 1.1 | 1.7 | 1.9 | 1.7 | 1.4 |
| Weekend exposure warmer months* | 2.0 | 1.5 | 2.0 | 6.7 | 6.7 | 3.1 | 2.5 |
| Holiday exposure* | |||||||
| Overall* | 2.0 | 1.6 | 1.8 | 2.3 | 2.7 | 2.3 | 2.0 |
| Holiday exposure lower than 45o* | 3.6 | 3.7 | 3.6 | 2.4 | 2.5 | 3.2 | 3.3 |
| rs_2282679 | 3.9 | 4.0 | 4.9 | 2.6 | 1.8 | 3.3 | 3.1 |
| rs_7944926 | 0.6 | 0.9 | 1.0 | 1.2 | 1.1 | 0.5 | 0.6 |
| rs_10741657 | 0.7 | 0.9 | 0.8 | 2.3 | 2.4 | 0.4 | 0.5 |
Adjusted models were corrected for age, sex, case–control status, vitamin D supplementation(where appropriate), BMI, and Townsend score
* Corrected for sun sensitivity status in addition to season, age, sex, vitamin D supplementation, BMI, and Townsend score in multivariable models
** Model includes daily sun exposure, weekend sun exposure in warmer months, weekend sun exposure in cooler months, holiday sun exposure and holiday sun exposure at low latitudes and is also corrected for sun sensitivity
Mean seasonally adjusted vitamin D levels stratified by rs2282679 (GC protein) genotype
| Mean vitamin D level (SD) | TT | GT | GG |
|---|---|---|---|
| 49.6 (21.4) | 43.7 (20.2) | 37.8 (16.8) | |
| Weekend exposure in warmer months (h/day) | |||
| ≤3 | 44.7 (20.8) | 40.0 (19.5) | 34.7 (14.4) |
| 3–5 | 51.3 (20.8) | 45.6 (20.5) | 40.2 (18.7) |
| >5 | 54.2 (22.4) | 48.1 (19.6) | 39.5 (18.7) |
| Holiday exposure <45N (h) | |||
| 0 | 47.2 (21.1) | 37.9 (18.0) | 35.5 (14.8) |
| 0–87.5 | 49.8 (21.3) | 45.8 (20.0) | 41.5 (17.8) |
| >87.5 | 52.8 (21.7) | 52.3 (20.8) | 36.7 (18.9) |
| Supplementation | |||
| No | 44.9 (20.1) | 38.9 (19.0) | 33.9 (14.5) |
| Yes | 56.7 (20.3) | 52.4 (19.1) | 37.9 (16.4) |
| Sensitivity | |||
| Non-sun-sensitive | 50.8 (21.7) | 45.6 (20.4) | 41.7 (17.1) |
| Sun-sensitive | 48.5 (21.2) | 41.9 (19.9) | 33.9 (15.8) |
Inheritance of less common variants in rs 2282679 (vitamin D-binding protein) is associated with lower levels of vitamin D. Here we show the effects of exposures moderating seasonally adjusted vitamin D level and the differences in levels achieved as a result of those exposures by genotype. The adjusted estimate assumes that blood was drawn in winter