Literature DB >> 21852535

Lineage-specific function of the noncoding Tsix RNA for Xist repression and Xi reactivation in mice.

Tatsuya Ohhata1, Claire E Senner, Myriam Hemberger, Anton Wutz.   

Abstract

The noncoding Tsix RNA is an antisense repressor of Xist and regulates X inactivation in mice. Tsix is essential for preventing the inactivation of the maternally inherited X chromosome in extraembryonic lineages where imprinted X-chromosome inactivation (XCI) occurs. Here we establish an inducible Tsix expression system for investigating Tsix function in development. We show that Tsix has a clear functional window in extraembryonic development. Within this window, Tsix can repress Xist, which is accompanied by DNA methylation of the Xist promoter. As a consequence of Xist repression, reactivation of the inactive X chromosome (Xi) is widely observed. In the parietal endoderm, Tsix represses Xist and causes reactivation of an Xi-linked GFP transgene throughout development, whereas Tsix progressively loses its Xist-repressing function from embryonic day 9.5 (E9.5) onward in trophoblast giant cells and spongiotrophoblast, suggesting that Tsix function depends on a lineage-specific environment. Our data also demonstrate that the maintenance of imprinted XCI requires Xist expression in specific extraembryonic tissues throughout development. This finding shows that reversible XCI is not exclusive to pluripotent cells, and that in some lineages cell differentiation is not accompanied by a stabilization of the Xi.

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Year:  2011        PMID: 21852535      PMCID: PMC3165935          DOI: 10.1101/gad.16997911

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  48 in total

1.  Targeted mutagenesis of Tsix leads to nonrandom X inactivation.

Authors:  J T Lee; N Lu
Journal:  Cell       Date:  1999-10-01       Impact factor: 41.582

2.  Disruption of imprinted X inactivation by parent-of-origin effects at Tsix.

Authors:  J T Lee
Journal:  Cell       Date:  2000-09-29       Impact factor: 41.582

3.  Establishment of histone h3 methylation on the inactive X chromosome requires transient recruitment of Eed-Enx1 polycomb group complexes.

Authors:  Jose Silva; Winifred Mak; Ilona Zvetkova; Ruth Appanah; Tatyana B Nesterova; Zoe Webster; Antoine H F M Peters; Thomas Jenuwein; Arie P Otte; Neil Brockdorff
Journal:  Dev Cell       Date:  2003-04       Impact factor: 12.270

4.  DNA methylation is dispensable for the growth and survival of the extraembryonic lineages.

Authors:  Morito Sakaue; Hiroshi Ohta; Yuichi Kumaki; Masaaki Oda; Yuko Sakaide; Chisa Matsuoka; Akiko Yamagiwa; Hitoshi Niwa; Teruhiko Wakayama; Masaki Okano
Journal:  Curr Biol       Date:  2010-07-15       Impact factor: 10.834

5.  Tsix silences Xist through modification of chromatin structure.

Authors:  Takashi Sado; Yuko Hoki; Hiroyuki Sasaki
Journal:  Dev Cell       Date:  2005-07       Impact factor: 12.270

Review 6.  Regulatory roles of natural antisense transcripts.

Authors:  Mohammad Ali Faghihi; Claes Wahlestedt
Journal:  Nat Rev Mol Cell Biol       Date:  2009-07-29       Impact factor: 94.444

7.  Transcriptional activation by tetracyclines in mammalian cells.

Authors:  M Gossen; S Freundlieb; G Bender; G Müller; W Hillen; H Bujard
Journal:  Science       Date:  1995-06-23       Impact factor: 47.728

8.  The Polycomb group protein EED is dispensable for the initiation of random X-chromosome inactivation.

Authors:  Sundeep Kalantry; Terry Magnuson
Journal:  PLoS Genet       Date:  2006-05-05       Impact factor: 5.917

9.  X chromosome reactivation initiates in nascent primordial germ cells in mice.

Authors:  Michihiko Sugimoto; Kuniya Abe
Journal:  PLoS Genet       Date:  2007-07       Impact factor: 5.917

10.  Promotion of reprogramming to ground state pluripotency by signal inhibition.

Authors:  Jose Silva; Ornella Barrandon; Jennifer Nichols; Jitsutaro Kawaguchi; Thorold W Theunissen; Austin Smith
Journal:  PLoS Biol       Date:  2008-10-21       Impact factor: 8.029

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  25 in total

1.  Failure of extra-embryonic progenitor maintenance in the absence of dosage compensation.

Authors:  Joshua W Mugford; Della Yee; Terry Magnuson
Journal:  Development       Date:  2012-05-09       Impact factor: 6.868

2.  Chromatin-Mediated Reversible Silencing of Sense-Antisense Gene Pairs in Embryonic Stem Cells Is Consolidated upon Differentiation.

Authors:  Friedemann Loos; Agnese Loda; Louise van Wijk; J Anton Grootegoed; Joost Gribnau
Journal:  Mol Cell Biol       Date:  2015-05-11       Impact factor: 4.272

Review 3.  New and Xisting regulatory mechanisms of X chromosome inactivation.

Authors:  Yesu Jeon; Kavitha Sarma; Jeannie T Lee
Journal:  Curr Opin Genet Dev       Date:  2012-03-16       Impact factor: 5.578

4.  Coupling of X-chromosome reactivation with the pluripotent stem cell state.

Authors:  Bernhard Payer; Jeannie T Lee
Journal:  RNA Biol       Date:  2014-08-19       Impact factor: 4.652

Review 5.  Advances in understanding chromosome silencing by the long non-coding RNA Xist.

Authors:  Takashi Sado; Neil Brockdorff
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-05       Impact factor: 6.237

6.  Uncoupling of X-linked gene silencing from XIST binding by DICER1 and chromatin modulation on human inactive X chromosome.

Authors:  Satya Keerthi Kota; Debabani Roy Chowdhury; Lakshmi K Rao; Venkata Padmalatha; Lalji Singh; Utpal Bhadra
Journal:  Chromosoma       Date:  2014-11-27       Impact factor: 4.316

7.  Epigenetic and transcriptional features of the novel human imprinted lncRNA GPR1AS suggest it is a functional ortholog to mouse Zdbf2linc.

Authors:  Hisato Kobayashi; Eikichi Yanagisawa; Akihiko Sakashita; Naoko Sugawara; Shiori Kumakura; Hidehiko Ogawa; Hidenori Akutsu; Kenichiro Hata; Kazuhiko Nakabayashi; Tomohiro Kono
Journal:  Epigenetics       Date:  2013-05-09       Impact factor: 4.528

8.  Tsix RNA and the germline factor, PRDM14, link X reactivation and stem cell reprogramming.

Authors:  Bernhard Payer; Michael Rosenberg; Masashi Yamaji; Yukihiro Yabuta; Michiyo Koyanagi-Aoi; Katsuhiko Hayashi; Shinya Yamanaka; Mitinori Saitou; Jeannie T Lee
Journal:  Mol Cell       Date:  2013-11-21       Impact factor: 17.970

Review 9.  Maternal H3K27me3-dependent autosomal and X chromosome imprinting.

Authors:  Zhiyuan Chen; Yi Zhang
Journal:  Nat Rev Genet       Date:  2020-06-08       Impact factor: 53.242

10.  A high-throughput small molecule screen identifies synergism between DNA methylation and Aurora kinase pathways for X reactivation.

Authors:  Derek Lessing; Thomas O Dial; Chunyao Wei; Bernhard Payer; Lieselot L G Carrette; Barry Kesner; Attila Szanto; Ajit Jadhav; David J Maloney; Anton Simeonov; Jimmy Theriault; Thomas Hasaka; Antonio Bedalov; Marisa S Bartolomei; Jeannie T Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-23       Impact factor: 11.205

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