Literature DB >> 21845362

¹H, ¹³C, and ¹⁵N resonance assignments and secondary structure prediction of the full-length transition state regulator AbrB from Bacillus anthracis.

Andrew L Olson1, Benjamin G Bobay, Christian Melander, John Cavanagh.   

Abstract

The AbrB protein is a transcription factor that regulates the expression of numerous essential genes during the cells transition phase state. AbrB from Bacillus anthracis is, nototriously, the principal protein responsible for anthrax toxin gene expression and is highly homologous to the much-studied AbrB protein from Bacillus subtilis having 85% sequence identity and the ability to regulate the same target promoters. Here we report backbone and sidechain resonance assignments and secondary structure prediction for the full-length AbrB protein from B. anthracis.

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Year:  2011        PMID: 21845362      PMCID: PMC3428226          DOI: 10.1007/s12104-011-9333-2

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  15 in total

1.  Role of Cys54 in AbrB multimerization and DNA-binding activity.

Authors:  Z E Phillips; M A Strauch
Journal:  FEMS Microbiol Lett       Date:  2001-09-25       Impact factor: 2.742

2.  Evaluation of the DNA binding tendencies of the transition state regulator AbrB.

Authors:  Benjamin G Bobay; Linda Benson; Stephen Naylor; Brett Feeney; A Clay Clark; Michael B Goshe; Mark A Strauch; Richele Thompson; John Cavanagh
Journal:  Biochemistry       Date:  2004-12-28       Impact factor: 3.162

3.  Revised structure of the AbrB N-terminal domain unifies a diverse superfamily of putative DNA-binding proteins.

Authors:  Benjamin G Bobay; Antonina Andreeva; Geoffrey A Mueller; John Cavanagh; Alexey G Murzin
Journal:  FEBS Lett       Date:  2005-10-04       Impact factor: 4.124

4.  AbrB-like transcription factors assume a swapped hairpin fold that is evolutionarily related to double-psi beta barrels.

Authors:  Murray Coles; Sergej Djuranovic; Johannes Söding; Tancred Frickey; Kristin Koretke; Vincent Truffault; Jörg Martin; Andrei N Lupas
Journal:  Structure       Date:  2005-06       Impact factor: 5.006

5.  NMR View: A computer program for the visualization and analysis of NMR data.

Authors:  B A Johnson; R A Blevins
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  The DNA-binding specificity of the Bacillus anthracis AbrB protein.

Authors:  Mark A Strauch; Petek Ballar; Austin J Rowshan; Katherine L Zoller
Journal:  Microbiology       Date:  2005-06       Impact factor: 2.777

8.  Insights into the nature of DNA binding of AbrB-like transcription factors.

Authors:  Daniel M Sullivan; Benjamin G Bobay; Douglas J Kojetin; Richele J Thompson; Mark Rance; Mark A Strauch; John Cavanagh
Journal:  Structure       Date:  2008-11-12       Impact factor: 5.006

9.  NMR structure of AbhN and comparison with AbrBN: FIRST insights into the DNA binding promiscuity and specificity of AbrB-like transition state regulator proteins.

Authors:  Benjamin G Bobay; Geoffrey A Mueller; Richele J Thompson; Alexey G Murzin; Ronald A Venters; Mark A Strauch; John Cavanagh
Journal:  J Biol Chem       Date:  2006-05-15       Impact factor: 5.157

10.  Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.

Authors:  Onuma Chumsakul; Hiroki Takahashi; Taku Oshima; Takahiro Hishimoto; Shigehiko Kanaya; Naotake Ogasawara; Shu Ishikawa
Journal:  Nucleic Acids Res       Date:  2010-09-03       Impact factor: 16.971

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  2 in total

1.  Chemical crosslinking and LC/MS analysis to determine protein domain orientation: application to AbrB.

Authors:  Andrew L Olson; Fan Liu; Ashley T Tucker; Michael B Goshe; John Cavanagh
Journal:  Biochem Biophys Res Commun       Date:  2013-01-09       Impact factor: 3.575

2.  Structure and DNA-binding traits of the transition state regulator AbrB.

Authors:  Andrew L Olson; Ashley T Tucker; Benjamin G Bobay; Erik J Soderblom; M Arthur Moseley; Richele J Thompson; John Cavanagh
Journal:  Structure       Date:  2014-10-09       Impact factor: 5.006

  2 in total

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