Literature DB >> 21837285

NEURONAL WHITE MATTER PARCELLATION USING SPATIALLY COHERENT NORMALIZED CUTS.

Luke Bloy1, Madhura Ingalhalikar, Ragini Verma.   

Abstract

This work presents an automated method for partitioning neuronal white matter (WM) into regions of interest with uniform WM architecture. These regions can then be used to replace atlas-derived regions for any subsequent statistical analysis. The fiber orientation distribution function is used as a model of WM architecture resulting in a voxel similarity function sensitive to both fiber orientations and configurations. The method utilizes the normalized cuts algorithm to partition WM voxels based on this similarity function along with a connected component labeling algorithm to ensure spatial compactness. We illustrate the algorithms ability to discern regions based on both orientation and complexity through its application to a simulated fiber crossing and an in-vivo dataset.

Entities:  

Year:  2011        PMID: 21837285      PMCID: PMC3152438          DOI: 10.1109/ISBI.2011.5872818

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  12 in total

1.  Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.

Authors:  Y Zhang; M Brady; S Smith
Journal:  IEEE Trans Med Imaging       Date:  2001-01       Impact factor: 10.048

2.  Fiber tract-based atlas of human white matter anatomy.

Authors:  Setsu Wakana; Hangyi Jiang; Lidia M Nagae-Poetscher; Peter C M van Zijl; Susumu Mori
Journal:  Radiology       Date:  2003-11-26       Impact factor: 11.105

3.  DTI based diagnostic prediction of a disease via pattern classification.

Authors:  Madhura Ingalhalikar; Stathis Kanterakis; Ruben Gur; Timothy P L Roberts; Ragini Verma
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

Review 4.  The application of DTI to investigate white matter abnormalities in schizophrenia.

Authors:  Marek Kubicki; Carl-Fredrik Westin; Robert W McCarley; Martha E Shenton
Journal:  Ann N Y Acad Sci       Date:  2005-12       Impact factor: 5.691

5.  Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution.

Authors:  J-Donald Tournier; Fernando Calamante; David G Gadian; Alan Connelly
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

6.  Measurement of fiber orientation distributions using high angular resolution diffusion imaging.

Authors:  Adam W Anderson
Journal:  Magn Reson Med       Date:  2005-11       Impact factor: 4.668

7.  A software tool to generate simulated white matter structures for the assessment of fibre-tracking algorithms.

Authors:  Thomas G Close; Jacques-Donald Tournier; Fernando Calamante; Leigh A Johnston; Iven Mareels; Alan Connelly
Journal:  Neuroimage       Date:  2009-04-08       Impact factor: 6.556

8.  White matter integrity in Asperger syndrome: a preliminary diffusion tensor magnetic resonance imaging study in adults.

Authors:  Oswald J N Bloemen; Quinton Deeley; Fred Sundram; Eileen M Daly; Gareth J Barker; Derek K Jones; Therese A M J van Amelsvoort; Nicole Schmitz; Dene Robertson; Kieran C Murphy; Declan G M Murphy
Journal:  Autism Res       Date:  2010-10       Impact factor: 5.216

9.  Diffusion tensor tractography findings in schizophrenia across the adult lifespan.

Authors:  Aristotle N Voineskos; Nancy J Lobaugh; Sylvain Bouix; Tarek K Rajji; Dielle Miranda; James L Kennedy; Benoit H Mulsant; Bruce G Pollock; Martha E Shenton
Journal:  Brain       Date:  2010-03-17       Impact factor: 13.501

10.  Diffusion tensor imaging of frontal lobe in autism spectrum disorder.

Authors:  Senthil K Sundaram; Ajay Kumar; Malek I Makki; Michael E Behen; Harry T Chugani; Diane C Chugani
Journal:  Cereb Cortex       Date:  2008-03-20       Impact factor: 5.357

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  2 in total

1.  HARDI based pattern classifiers for the identification of white matter pathologies.

Authors:  Luke Bloy; Madhura Ingalhalikar; Harini Eavani; Timothy P L Roberts; Robert T Schultz; Ragini Verma
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

2.  White matter atlas generation using HARDI based automated parcellation.

Authors:  Luke Bloy; Madhura Ingalhalikar; Harini Eavani; Robert T Schultz; Timothy P L Roberts; Ragini Verma
Journal:  Neuroimage       Date:  2011-08-26       Impact factor: 6.556

  2 in total

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