Literature DB >> 20879275

DTI based diagnostic prediction of a disease via pattern classification.

Madhura Ingalhalikar1, Stathis Kanterakis, Ruben Gur, Timothy P L Roberts, Ragini Verma.   

Abstract

The paper presents a method of creating abnormality classifiers learned from Diffusion Tensor Imaging (DTI) data of a population of patients and controls. The score produced by the classifier can be used to aid in diagnosis as it quantifies the degree of pathology. Using anatomically meaningful features computed from the DTI data we train a non-linear support vector machine (SVM) pattern classifier. The method begins with high dimensional elastic registration of DT images followed by a feature extraction step that involves creating a feature by concatenating average anisotropy and diffusivity values in anatomically meaningful regions. Feature selection is performed via a mutual information based technique followed by sequential elimination of the features. A non-linear SVM classifier is then constructed by training on the selected features. The classifier assigns each test subject with a probabilistic abnormality score that indicates the extent of pathology. In this study, abnormality classifiers were created for two populations; one consisting of schizophrenia patients (SCZ) and the other with individuals with autism spectrum disorder (ASD). A clear distinction between the SCZ patients and controls was achieved with 90.62% accuracy while for individuals with ASD, 89.58% classification accuracy was obtained. The abnormality scores clearly separate the groups and the high classification accuracy indicates the prospect of using the scores as a diagnostic and prognostic marker.

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Mesh:

Year:  2010        PMID: 20879275     DOI: 10.1007/978-3-642-15705-9_68

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  21 in total

Review 1.  Autism spectrum disorder: does neuroimaging support the DSM-5 proposal for a symptom dyad? A systematic review of functional magnetic resonance imaging and diffusion tensor imaging studies.

Authors:  Laura Pina-Camacho; Sonia Villero; David Fraguas; Leticia Boada; Joost Janssen; Francisco J Navas-Sánchez; Maria Mayoral; Cloe Llorente; Celso Arango; Mara Parellada
Journal:  J Autism Dev Disord       Date:  2012-07

Review 2.  In search of biomarkers for autism: scientific, social and ethical challenges.

Authors:  Pat Walsh; Mayada Elsabbagh; Patrick Bolton; Ilina Singh
Journal:  Nat Rev Neurosci       Date:  2011-09-20       Impact factor: 34.870

3.  NEURONAL WHITE MATTER PARCELLATION USING SPATIALLY COHERENT NORMALIZED CUTS.

Authors:  Luke Bloy; Madhura Ingalhalikar; Ragini Verma
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2011

4.  Classification of schizophrenia using feature-based morphometry.

Authors:  U Castellani; E Rossato; V Murino; M Bellani; G Rambaldelli; C Perlini; L Tomelleri; M Tansella; P Brambilla
Journal:  J Neural Transm (Vienna)       Date:  2011-09-09       Impact factor: 3.575

5.  Classification of First-Episode Schizophrenia Using Multimodal Brain Features: A Combined Structural and Diffusion Imaging Study.

Authors:  Sugai Liang; Yinfei Li; Zhong Zhang; Xiangzhen Kong; Qiang Wang; Wei Deng; Xiaojing Li; Liansheng Zhao; Mingli Li; Yajing Meng; Feng Huang; Xiaohong Ma; Xin-Min Li; Andrew J Greenshaw; Junming Shao; Tao Li
Journal:  Schizophr Bull       Date:  2019-04-25       Impact factor: 9.306

6.  Diffusion based abnormality markers of pathology: toward learned diagnostic prediction of ASD.

Authors:  Madhura Ingalhalikar; Drew Parker; Luke Bloy; Timothy P L Roberts; Ragini Verma
Journal:  Neuroimage       Date:  2011-05-14       Impact factor: 6.556

Review 7.  Predictive classification of individual magnetic resonance imaging scans from children and adolescents.

Authors:  B A Johnston; B Mwangi; K Matthews; D Coghill; J D Steele
Journal:  Eur Child Adolesc Psychiatry       Date:  2012-08-29       Impact factor: 4.785

8.  HARDI based pattern classifiers for the identification of white matter pathologies.

Authors:  Luke Bloy; Madhura Ingalhalikar; Harini Eavani; Timothy P L Roberts; Robert T Schultz; Ragini Verma
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

9.  Searching for Imaging Biomarkers of Psychotic Dysconnectivity.

Authors:  Amanda L Rodrigue; Dana Mastrovito; Oscar Esteban; Joke Durnez; Marinka M G Koenis; Ronald Janssen; Aaron Alexander-Bloch; Emma M Knowles; Samuel R Mathias; Josephine Mollon; Godfrey D Pearlson; Sophia Frangou; John Blangero; Russell A Poldrack; David C Glahn
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2020-12-16

Review 10.  Brain imaging-based machine learning in autism spectrum disorder: methods and applications.

Authors:  Ming Xu; Vince Calhoun; Rongtao Jiang; Weizheng Yan; Jing Sui
Journal:  J Neurosci Methods       Date:  2021-06-24       Impact factor: 2.390

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