Literature DB >> 21822461

Biopanning Phage-Display Libraries on Small Tissue Sections Captured by Laser Capture Microdissection.

Yujing Sun1, Girja S Shukla, Guy G Kennedy, David M Warshaw, Donald L Weaver, Stephanie C Pero, Lisa Floyd, David N Krag.   

Abstract

Phage-display technology has been widely used for developing tumor-targeting agents. Laser capture microdissection (LCM) has proven to be an accurate method to select specific cells from histological sections. Our goal was to develop a method to combine phage-display with LCM to obtain phage-displayed ligands that bind to selected cells in human solid tumors. Two panning strategies were evaluated and optimized. The first strategy was to pan on patient tissue mounted to LCM slides before LCM occurred. The poor panning output showed that phage did not tolerate the drying conditions during LCM. The second strategy was to pan on tumor cells from the patient tumor tissue that were isolated by LCM. The catapulted tumor cells were transferred to a filter unit which retained cells but allowed rinsing of unbound phage. Six commercially available filter units were evaluated and the one with the lowest nonspecific binding to phage was selected for the panning steps. The smallest number of cells (500) in which panning could be successfully accomplished was also determined. A micropipette system was developed to further decrease background by removing catapulted cells from the filter unit after panning was complete. This left behind nearly all background binding phage in the filter unit. This strategy led to the selection of individual phage antibody clones (5 out of 79 tested) specific for tumor cells of the patient's cancer tissue. Immunofluorescence staining on tumor tissues from the same patient showed that these clones have selective signals on tumor island cells, while the scFv library only showed low nonspecific signals on tumor tissues. We established a method of panning on a small number of LCM-captured solid tumor specimens. The quick identification of specific phage-displayed antibodies in the cancer tissue of human patients will greatly enhance the therapy and diagnosis of cancer.

Entities:  

Year:  2009        PMID: 21822461      PMCID: PMC3149830     

Source DB:  PubMed          Journal:  J Biotech Res        ISSN: 1944-3285


  13 in total

1.  Selection of large diversities of antiidiotypic antibody fragments by phage display.

Authors:  Steffen Goletz; Peter Astrup Christensen; Peter Kristensen; Dietmar Blohm; Ian Tomlinson; Greg Winter; Uwe Karsten
Journal:  J Mol Biol       Date:  2002-02-01       Impact factor: 5.469

2.  Tech.Sight. Phage display. Affinity selection from biological libraries.

Authors:  James F Smothers; Steven Henikoff; Paul Carter
Journal:  Science       Date:  2002-10-18       Impact factor: 47.728

3.  Subtractive isolation of phage-displayed single-chain antibodies to thymic stromal cells by using intact thymic fragments.

Authors:  W Van Ewijk; J de Kruif; W T Germeraad; P Berendes; C Röpke; P P Platenburg; T Logtenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-15       Impact factor: 11.205

4.  Selection of tumor-binding ligands in cancer patients with phage display libraries.

Authors:  David N Krag; Girja S Shukla; Guang-Ping Shen; Stephanie Pero; Taka Ashikaga; Susan Fuller; Donald L Weaver; Susan Burdette-Radoux; Christian Thomas
Journal:  Cancer Res       Date:  2006-08-01       Impact factor: 12.701

5.  Phage display selection for cell-specific ligands: development of a screening procedure suitable for small tumor specimens.

Authors:  Girja S Shukla; David N Krag
Journal:  J Drug Target       Date:  2005-01       Impact factor: 5.121

6.  Identification of clinically significant tumor antigens by selecting phage antibody library on tumor cells in situ using laser capture microdissection.

Authors:  Weiming Ruan; Adam Sassoon; Feng An; Jeff P Simko; Bin Liu
Journal:  Mol Cell Proteomics       Date:  2006-09-18       Impact factor: 5.911

7.  Application of laser capture microdissection to phage display peptide library screening.

Authors:  Hai Lu; Dadi Jin; Yvonne L Kapila
Journal:  Oral Surg Oral Med Oral Pathol Oral Radiol Endod       Date:  2004-12

8.  Identification of oligopeptide binding to colon cancer cells separated from patients using laser capture microdissection.

Authors:  Naoki Kubo; Noriyuki Akita; Akira Shimizu; Hiroe Kitahara; Alan L Parker; Shinichi Miyagawa
Journal:  J Drug Target       Date:  2008-06       Impact factor: 5.121

9.  Identification of a small peptide that inhibits the phosphorylation of ErbB2 and proliferation of ErbB2 overexpressing breast cancer cells.

Authors:  Stephanie C Pero; Girja S Shukla; Amy L Armstrong; Daniel Peterson; Susan P Fuller; Katherine Godin; Sarah L Kingsley-Richards; Donald L Weaver; Jeffrey Bond; David N Krag
Journal:  Int J Cancer       Date:  2004-10-10       Impact factor: 7.396

10.  Phage display derived human monoclonal antibodies isolated by binding to the surface of live primary breast cancer cells recognize GRP78.

Authors:  Charlotte G Jakobsen; Nicolaj Rasmussen; Anne-Vibeke Laenkholm; Henrik J Ditzel
Journal:  Cancer Res       Date:  2007-10-01       Impact factor: 12.701

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  8 in total

Review 1.  Selection strategies for anticancer antibody discovery: searching off the beaten path.

Authors:  David Sánchez-Martín; Morten Dræby Sørensen; Simon Lykkemark; Laura Sanz; Peter Kristensen; Erkki Ruoslahti; Luis Álvarez-Vallina
Journal:  Trends Biotechnol       Date:  2015-03-26       Impact factor: 19.536

Review 2.  Paradigm shift in bacteriophage-mediated delivery of anticancer drugs: from targeted 'magic bullets' to self-navigated 'magic missiles'.

Authors:  Valery A Petrenko; James W Gillespie
Journal:  Expert Opin Drug Deliv       Date:  2016-08-05       Impact factor: 6.648

3.  Phage-display selection on tumor histological specimens with laser capture microdissection.

Authors:  Yujing Sun; Girja S Shukla; Donald Weaver; Stephanie C Pero; David N Krag
Journal:  J Immunol Methods       Date:  2009-06-16       Impact factor: 2.303

4.  Geometry and expression enhance enrichment of functional yeast-displayed ligands via cell panning.

Authors:  Lawrence A Stern; Ian A Schrack; Sadie M Johnson; Aakash Deshpande; Nathaniel R Bennett; Lauren A Harasymiw; Melissa K Gardner; Benjamin J Hackel
Journal:  Biotechnol Bioeng       Date:  2016-06-30       Impact factor: 4.530

5.  Microfluidic platforms for rapid screening of cancer affinity reagents by using tissue samples.

Authors:  Lien-Yu Hung; Chien-Yu Fu; Chih-Hung Wang; Yuan-Jhe Chuang; Yi-Cheng Tsai; Yi-Ling Lo; Pang-Hung Hsu; Hwan-You Chang; Shu-Chu Shiesh; Keng-Fu Hsu; Gwo-Bin Lee
Journal:  Biomicrofluidics       Date:  2018-10-03       Impact factor: 2.800

6.  A novel excision selection method for isolation of antibodies binding antigens expressed specifically by rare cells in tissue sections.

Authors:  Simon Lykkemark; Ole Aalund Mandrup; Mads Bjørnkjær Jensen; Jesper Just; Peter Kristensen
Journal:  Nucleic Acids Res       Date:  2017-06-20       Impact factor: 16.971

Review 7.  Antibody Identification for Antigen Detection in Formalin-Fixed Paraffin-Embedded Tissue Using Phage Display and Naïve Libraries.

Authors:  Célestine Mairaville; Pierre Martineau
Journal:  Antibodies (Basel)       Date:  2021-01-14

8.  Combine Phage Antibody Display Library Selection on Patient Tissue Specimens with Laser Capture Microdissection to Identify Novel Human Antibodies Targeting Clinically Relevant Tumor Antigens.

Authors:  Yang Su; Scott Bidlingmaier; Nam-Kyung Lee; Bin Liu
Journal:  Methods Mol Biol       Date:  2018
  8 in total

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