Literature DB >> 21821583

Genomic and EST microsatellite markers for Aquilegia flabellata and cross-amplification in A. oxysepala (Ranunculaceae).

Lin-Feng Li1, Di Pang, Qiang-Lan Liao, Hong-Xing Xiao.   

Abstract

PREMISE OF THE STUDY: The goal of this study was to identify genomic and expressed sequence tag (EST)-derived microsatellite markers from the species Aquilegia flabellata and assess their transferability in A. oxysepala. METHODS AND
RESULTS: Eleven genomic and nine EST-derived microsatellite loci were characterized in A. flabellata. These microsatellite primers amplified 66 alleles in all 20 loci. The observed heterozygosity (H(O)) for each population ranged from 0.00 to 0.94.
CONCLUSIONS: All of the 20 loci were successfully amplified in A. oxysepala. These genomic and EST-derived microsatellite markers will be useful in further genetic structure, speciation, and adaptive evolution studies.

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Year:  2011        PMID: 21821583     DOI: 10.3732/ajb.1100057

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  6 in total

1.  Genetic and Epigenetic Signatures Associated with the Divergence of Aquilegia Species.

Authors:  Zhenhui Wang; Tianyuan Lu; Mingrui Li; Ning Ding; Lizhen Lan; Xiang Gao; Aisheng Xiong; Jian Zhang; Linfeng Li
Journal:  Genes (Basel)       Date:  2022-04-28       Impact factor: 4.141

2.  Development of eighteen microsatellite markers in Anemone amurensis (Ranunculaceae) and cross-amplification in congeneric species.

Authors:  Mingzhou Sun; Xiao Yin; Fengxue Shi; Lin Li; Mingrui Li; Linfeng Li; Hongxing Xiao
Journal:  Int J Mol Sci       Date:  2012-04-18       Impact factor: 6.208

3.  Rapid Divergence Followed by Adaptation to Contrasting Ecological Niches of Two Closely Related Columbine Species Aquilegia japonica and A. oxysepala.

Authors:  Ming-Rui Li; Hua-Ying Wang; Ning Ding; Tianyuan Lu; Ye-Chao Huang; Hong-Xing Xiao; Bao Liu; Lin-Feng Li
Journal:  Genome Biol Evol       Date:  2019-03-01       Impact factor: 3.416

4.  Isolation and identification of fourteen microsatellite markers in Clivia miniata and Clivia nobilis (Amaryllidaceae).

Authors:  Wei Gao; He Zhao; Ying Liu; Ming-Rui Li; Eliyas Nurmamat; Lin-Feng Li; Yue-Ying Ren; Hong-Xing Xiao
Journal:  Int J Mol Sci       Date:  2012-08-02       Impact factor: 6.208

5.  Phylogeography and genetic effects of habitat fragmentation on endemic Urophysa (Ranunculaceae) in Yungui Plateau and adjacent regions.

Authors:  Deng-Feng Xie; Min-Jie Li; Jin-Bo Tan; Megan Price; Qun-Ying Xiao; Song-Dong Zhou; Yan Yu; Xing-Jin He
Journal:  PLoS One       Date:  2017-10-20       Impact factor: 3.240

6.  Development of 15 microsatellite markers in Acer triflorum (Aceraceae) and cross-amplification in congeneric species.

Authors:  Hua-Ying Wang; Bai-Ying Wei; Hong-Xing Xiao
Journal:  Appl Plant Sci       Date:  2018-07-16       Impact factor: 1.936

  6 in total

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